RNA–Protein interactions for RNA: ENST00000622329.1

RNU6-538P-201, Transcript of RNA, U6 small nuclear 538, pseudogene, humanhuman

BASIC

Gene RNU6-538P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-538P-201ENST00000622329 TSEN34Q9BSV6 310 aaKnown RBP9.69□□□□□ -0.86
RNU6-538P-201ENST00000622329 NUTM2BA6NNL0 878 aaPredicted RBP9.68□□□□□ -0.86
RNU6-538P-201ENST00000622329 NUTM2EB1AL46 878 aaPredicted RBP9.68□□□□□ -0.86
RNU6-538P-201ENST00000622329 RNFT1Q5M7Z0 435 aa9.68□□□□□ -0.86
RNU6-538P-201ENST00000622329 NBPF14Q5TI25 921 aa9.68□□□□□ -0.86
RNU6-538P-201ENST00000622329 NUTM2DQ5VT03 806 aaPredicted RBP9.68□□□□□ -0.86
RNU6-538P-201ENST00000622329 NUTM2AQ8IVF1 878 aaPredicted RBP9.68□□□□□ -0.86
RNU6-538P-201ENST00000622329 OCSTAMPQ9BR26 566 aa9.68□□□□□ -0.86
RNU6-538P-201ENST00000622329 EMILIN1Q9Y6C2 1016 aa9.68□□□□□ -0.86
RNU6-538P-201ENST00000622329 TTLL8A6PVC2 850 aa9.67□□□□□ -0.86
RNU6-538P-201ENST00000622329 UPP2O95045 317 aa9.67□□□□□ -0.86
RNU6-538P-201ENST00000622329 SUZ12Q15022 739 aaKnown RBP9.67□□□□□ -0.86
RNU6-538P-201ENST00000622329 PPP1R26Q5T8A7 1209 aaPredicted RBP9.67□□□□□ -0.86
RNU6-538P-201ENST00000622329 NANOS1Q8WY41 292 aaKnown RBP9.67□□□□□ -0.86
RNU6-538P-201ENST00000622329 CARD14Q9BXL6 1004 aa9.67□□□□□ -0.86
RNU6-538P-201ENST00000622329 SPINT1O43278 529 aa9.66□□□□□ -0.86
RNU6-538P-201ENST00000622329 CTDSPL2Q05D32 466 aa9.66□□□□□ -0.86
RNU6-538P-201ENST00000622329 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.66□□□□□ -0.86
RNU6-538P-201ENST00000622329 KCTD17Q8N5Z5 321 aa9.66□□□□□ -0.86
RNU6-538P-201ENST00000622329 CNTNAP3BQ96NU0 1288 aa9.66□□□□□ -0.86
RNU6-538P-201ENST00000622329 CNTNAP3Q9BZ76 1288 aa9.66□□□□□ -0.86
RNU6-538P-201ENST00000622329 FIGNL2A6NMB9 653 aa9.65□□□□□ -0.86
RNU6-538P-201ENST00000622329 CLK2P49760 499 aaKnown RBP9.65□□□□□ -0.86
RNU6-538P-201ENST00000622329 TMEM132AQ24JP5 1023 aa9.65□□□□□ -0.86
RNU6-538P-201ENST00000622329 SLC35F4A4IF30 521 aa9.64□□□□□ -0.87
RNU6-538P-201ENST00000622329 COL25A1Q9BXS0 654 aaPredicted RBP9.64□□□□□ -0.87
RNU6-538P-201ENST00000622329 ZNF385CQ66K41 422 aaPredicted RBP9.63□□□□□ -0.87
RNU6-538P-201ENST00000622329 CCDC155Q8N6L0 562 aa9.63□□□□□ -0.87
RNU6-538P-201ENST00000622329 HELBQ8NG08 1087 aaPredicted RBP9.63□□□□□ -0.87
RNU6-538P-201ENST00000622329 WHAMMQ8TF30 809 aa9.63□□□□□ -0.87
RNU6-538P-201ENST00000622329 LRRN4Q8WUT4 740 aa9.63□□□□□ -0.87
RNU6-538P-201ENST00000622329 GPKOWQ92917 476 aaPredicted RBP eCLIP9.63□□□□□ -0.87
RNU6-538P-201ENST00000622329 ADAMTS8Q9UP79 889 aa9.63□□□□□ -0.87
RNU6-538P-201ENST00000622329 CTSOP43234 321 aaPredicted RBP9.61□□□□□ -0.87
RNU6-538P-201ENST00000622329 RASSF7Q02833 373 aa9.61□□□□□ -0.87
RNU6-538P-201ENST00000622329 PDXDC2PQ6P474 469 aa9.61□□□□□ -0.87
RNU6-538P-201ENST00000622329 AGBL1Q96MI9 1066 aa9.61□□□□□ -0.87
RNU6-538P-201ENST00000622329 SLC24A3Q9HC58 644 aa9.61□□□□□ -0.87
RNU6-538P-201ENST00000622329 POLR3EQ9NVU0 708 aa9.61□□□□□ -0.87
RNU6-538P-201ENST00000622329 SENP3-EIF4A1A0A087X0R7 540 aa9.6□□□□□ -0.87
RNU6-538P-201ENST00000622329 KCTD15Q96SI1 283 aaPredicted RBP9.6□□□□□ -0.87
RNU6-538P-201ENST00000622329 ARHGEF15O94989 841 aa9.59□□□□□ -0.87
RNU6-538P-201ENST00000622329 SLURP2P0DP57 97 aa9.59□□□□□ -0.87
RNU6-538P-201ENST00000622329 INTS6LQ5JSJ4 861 aaKnown RBP9.59□□□□□ -0.87
RNU6-538P-201ENST00000622329 FKBPLQ9UIM3 349 aa9.59□□□□□ -0.87
RNU6-538P-201ENST00000622329 C14orf37Q86TY3 774 aa9.58□□□□□ -0.88
RNU6-538P-201ENST00000622329 KDF1Q8NAX2 398 aaPredicted RBP9.58□□□□□ -0.88
RNU6-538P-201ENST00000622329 ITGA6P23229 1130 aa9.57□□□□□ -0.88
RNU6-538P-201ENST00000622329 NR6A1Q15406 480 aa9.57□□□□□ -0.88
RNU6-538P-201ENST00000622329 INSM2Q96T92 566 aaPredicted RBP9.57□□□□□ -0.88
RNU6-538P-201ENST00000622329 ARHGAP9Q9BRR9 750 aa9.57□□□□□ -0.88
RNU6-538P-201ENST00000622329 PGPEP1Q9NXJ5 209 aa9.57□□□□□ -0.88
RNU6-538P-201ENST00000622329 GDF11O95390 407 aa9.56□□□□□ -0.88
RNU6-538P-201ENST00000622329 TMEM151AQ8N4L1 468 aa9.56□□□□□ -0.88
RNU6-538P-201ENST00000622329 RNF217Q8TC41 542 aa9.56□□□□□ -0.88
RNU6-538P-201ENST00000622329 VWA5B2Q8N398 1253 aa9.55□□□□□ -0.88
RNU6-538P-201ENST00000622329 TMPRSS4Q9NRS4 437 aa9.55□□□□□ -0.88
RNU6-538P-201ENST00000622329 FOXD4L5Q5VV16 416 aaPredicted RBP9.54□□□□□ -0.88
RNU6-538P-201ENST00000622329 EPS8L1Q8TE68 723 aa9.54□□□□□ -0.88
RNU6-538P-201ENST00000622329 SLC10A4Q96EP9 437 aa9.54□□□□□ -0.88
RNU6-538P-201ENST00000622329 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.54□□□□□ -0.88
RNU6-538P-201ENST00000622329 LILRA1O75019 489 aa9.53□□□□□ -0.88
RNU6-538P-201ENST00000622329 ADD1P35611 737 aaKnown RBP9.53□□□□□ -0.88
RNU6-538P-201ENST00000622329 RELBQ01201 579 aa9.53□□□□□ -0.88
RNU6-538P-201ENST00000622329 PROCA1Q8NCQ7 364 aaPredicted RBP9.53□□□□□ -0.88
RNU6-538P-201ENST00000622329 CUEDC1Q9NWM3 386 aaPredicted RBP9.53□□□□□ -0.88
RNU6-538P-201ENST00000622329 PODXL2Q9NZ53 605 aa9.53□□□□□ -0.88
RNU6-538P-201ENST00000622329 ZNF395Q9H8N7 513 aaPredicted RBP9.52□□□□□ -0.89
RNU6-538P-201ENST00000622329 CDV3Q9UKY7 258 aaKnown RBP9.52□□□□□ -0.89
RNU6-538P-201ENST00000622329 PPP2R2DQ66LE6 453 aa9.51□□□□□ -0.89
RNU6-538P-201ENST00000622329 SVOPQ8N4V2 548 aa9.51□□□□□ -0.89
RNU6-538P-201ENST00000622329 ZNF784Q8NCA9 323 aaPredicted RBP9.51□□□□□ -0.89
RNU6-538P-201ENST00000622329 ADAM32Q8TC27 787 aa9.51□□□□□ -0.89
RNU6-538P-201ENST00000622329 RSPH6AQ9H0K4 717 aa9.51□□□□□ -0.89
RNU6-538P-201ENST00000622329 ZC3H4Q9UPT8 1303 aaKnown RBP9.51□□□□□ -0.89
RNU6-538P-201ENST00000622329 DHX9Q08211 1270 aaKnown RBP9.5□□□□□ -0.89
RNU6-538P-201ENST00000622329 GAS6Q14393 721 aa9.5□□□□□ -0.89
RNU6-538P-201ENST00000622329 HMX1Q9NP08 348 aaPredicted RBP9.5□□□□□ -0.89
RNU6-538P-201ENST00000622329 CDC14CA4D256 554 aa9.49□□□□□ -0.89
RNU6-538P-201ENST00000622329 SV2AQ7L0J3 742 aa9.49□□□□□ -0.89
RNU6-538P-201ENST00000622329 ZBTB33Q86T24 672 aa9.49□□□□□ -0.89
RNU6-538P-201ENST00000622329 SKIV2LQ15477 1246 aaKnown RBP9.48□□□□□ -0.89
RNU6-538P-201ENST00000622329 LYPD4Q6UWN0 246 aa9.48□□□□□ -0.89
RNU6-538P-201ENST00000622329 POLMQ9NP87 494 aaPredicted RBP9.48□□□□□ -0.89
RNU6-538P-201ENST00000622329 GPSM3Q9Y4H4 160 aa9.48□□□□□ -0.89
RNU6-538P-201ENST00000622329 ESPNB1AK53 854 aa9.47□□□□□ -0.89
RNU6-538P-201ENST00000622329 ERVH48-1M5A8F1 160 aa9.47□□□□□ -0.89
RNU6-538P-201ENST00000622329 ADH1AP07327 375 aa9.47□□□□□ -0.89
RNU6-538P-201ENST00000622329 RNF225M0QZC1 329 aaPredicted RBP9.46□□□□□ -0.9
RNU6-538P-201ENST00000622329 IRS1P35568 1242 aa9.46□□□□□ -0.9
RNU6-538P-201ENST00000622329 PTK2Q05397 1052 aa9.46□□□□□ -0.9
RNU6-538P-201ENST00000622329 SH3D19Q5HYK7 790 aa9.46□□□□□ -0.9
RNU6-538P-201ENST00000622329 ADAMTS2O95450 1211 aa9.45□□□□□ -0.9
RNU6-538P-201ENST00000622329 PTGIRP43119 386 aa9.44□□□□□ -0.9
RNU6-538P-201ENST00000622329 DNMT3AQ9Y6K1 912 aaPredicted RBP9.44□□□□□ -0.9
RNU6-538P-201ENST00000622329 FAM117AQ9C073 453 aa9.43□□□□□ -0.9
RNU6-538P-201ENST00000622329 GPBP1L1Q9HC44 474 aaPredicted RBP9.43□□□□□ -0.9
RNU6-538P-201ENST00000622329 ITGB2P05107 769 aa9.42□□□□□ -0.9
RNU6-538P-201ENST00000622329 RAB15P59190 212 aa9.42□□□□□ -0.9
RNU6-538P-201ENST00000622329 AP1G2O75843 785 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms