RNA–Protein interactions for RNA: ENST00000606347.1

UCHL3-204, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

TSL 2

Gene UCHL3, Length 722 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-204ENST00000606347 CFAP99D6REC4 459 aa9.56□□□□□ -0.88
UCHL3-204ENST00000606347 K7ELQ4 463 aaPredicted RBP9.56□□□□□ -0.88
UCHL3-204ENST00000606347 SRSF11Q05519 484 aaKnown RBP9.56□□□□□ -0.88
UCHL3-204ENST00000606347 ENAMQ9NRM1 1142 aa9.56□□□□□ -0.88
UCHL3-204ENST00000606347 Q8N3U1 123 aa9.55□□□□□ -0.88
UCHL3-204ENST00000606347 C1QTNF2Q9BXJ5 285 aa9.55□□□□□ -0.88
UCHL3-204ENST00000606347 KRTAP9-2Q9BYQ4 174 aa9.55□□□□□ -0.88
UCHL3-204ENST00000606347 MAP4K5Q9Y4K4 846 aa9.55□□□□□ -0.88
UCHL3-204ENST00000606347 MAGEB6P1A0A0J9YX57 407 aa9.53□□□□□ -0.88
UCHL3-204ENST00000606347 CTSOP43234 321 aaPredicted RBP9.53□□□□□ -0.88
UCHL3-204ENST00000606347 PPP1R26Q5T8A7 1209 aaPredicted RBP9.52□□□□□ -0.89
UCHL3-204ENST00000606347 Q6ZVU0 165 aa9.52□□□□□ -0.89
UCHL3-204ENST00000606347 PGPEP1Q9NXJ5 209 aa9.52□□□□□ -0.89
UCHL3-204ENST00000606347 KRTAP9-6A0A140TA67 174 aa9.51□□□□□ -0.89
UCHL3-204ENST00000606347 GAS6Q14393 721 aa9.51□□□□□ -0.89
UCHL3-204ENST00000606347 PODNQ7Z5L7 613 aa9.51□□□□□ -0.89
UCHL3-204ENST00000606347 BEND7Q8N7W2 519 aaPredicted RBP9.51□□□□□ -0.89
UCHL3-204ENST00000606347 AGBL1Q96MI9 1066 aa9.51□□□□□ -0.89
UCHL3-204ENST00000606347 PCDHB15Q9Y5E8 787 aa9.51□□□□□ -0.89
UCHL3-204ENST00000606347 PER1O15534 1290 aaPredicted RBP9.5□□□□□ -0.89
UCHL3-204ENST00000606347 RELBQ01201 579 aa9.5□□□□□ -0.89
UCHL3-204ENST00000606347 NEDD1Q8NHV4 660 aa9.5□□□□□ -0.89
UCHL3-204ENST00000606347 INSM2Q96T92 566 aaPredicted RBP9.5□□□□□ -0.89
UCHL3-204ENST00000606347 CARD14Q9BXL6 1004 aa9.5□□□□□ -0.89
UCHL3-204ENST00000606347 SENP3-EIF4A1A0A087X0R7 540 aa9.49□□□□□ -0.89
UCHL3-204ENST00000606347 TRMT44Q8IYL2 757 aaKnown RBP9.49□□□□□ -0.89
UCHL3-204ENST00000606347 POLMQ9NP87 494 aaPredicted RBP9.49□□□□□ -0.89
UCHL3-204ENST00000606347 HRCP23327 699 aa9.48□□□□□ -0.89
UCHL3-204ENST00000606347 RSBN1LQ6PCB5 846 aaPredicted RBP9.48□□□□□ -0.89
UCHL3-204ENST00000606347 TSC1Q92574 1164 aa9.48□□□□□ -0.89
UCHL3-204ENST00000606347 ARMC2Q8NEN0 867 aa9.47□□□□□ -0.89
UCHL3-204ENST00000606347 ZBTB3Q9H5J0 574 aa9.47□□□□□ -0.89
UCHL3-204ENST00000606347 CUEDC1Q9NWM3 386 aaPredicted RBP9.47□□□□□ -0.89
UCHL3-204ENST00000606347 TTLL12Q14166 644 aaPredicted RBP9.46□□□□□ -0.9
UCHL3-204ENST00000606347 NBPF14Q5TI25 921 aa9.46□□□□□ -0.9
UCHL3-204ENST00000606347 SH3BP5LQ7L8J4 393 aa9.46□□□□□ -0.9
UCHL3-204ENST00000606347 RNF217Q8TC41 542 aa9.46□□□□□ -0.9
UCHL3-204ENST00000606347 BAG6P46379 1132 aa9.45□□□□□ -0.9
UCHL3-204ENST00000606347 CABLES1Q8TDN4 633 aa9.45□□□□□ -0.9
UCHL3-204ENST00000606347 TBC1D2Q9BYX2 928 aa9.45□□□□□ -0.9
UCHL3-204ENST00000606347 GJA5P36382 358 aa9.44□□□□□ -0.9
UCHL3-204ENST00000606347 BEGAINQ9BUH8 593 aa9.44□□□□□ -0.9
UCHL3-204ENST00000606347 ZNF395Q9H8N7 513 aaPredicted RBP9.44□□□□□ -0.9
UCHL3-204ENST00000606347 TULP1O00294 542 aaPredicted RBP9.43□□□□□ -0.9
UCHL3-204ENST00000606347 FURINP09958 794 aa9.43□□□□□ -0.9
UCHL3-204ENST00000606347 BCRP11274 1271 aa9.43□□□□□ -0.9
UCHL3-204ENST00000606347 CSPP1Q1MSJ5 1256 aa9.43□□□□□ -0.9
UCHL3-204ENST00000606347 IGF1RP08069 1367 aa9.42□□□□□ -0.9
UCHL3-204ENST00000606347 ERFEQ4G0M1 354 aa9.42□□□□□ -0.9
UCHL3-204ENST00000606347 MBIPQ9NS73 344 aa9.42□□□□□ -0.9
UCHL3-204ENST00000606347 GPR25O00155 361 aa9.41□□□□□ -0.9
UCHL3-204ENST00000606347 KRTAP1-3Q8IUG1 177 aa9.41□□□□□ -0.9
UCHL3-204ENST00000606347 GIGYF2Q6Y7W6 1299 aaKnown RBP9.39□□□□□ -0.91
UCHL3-204ENST00000606347 KCTD15Q96SI1 283 aaPredicted RBP9.39□□□□□ -0.91
UCHL3-204ENST00000606347 KRBA1A5PL33 1030 aa9.38□□□□□ -0.91
UCHL3-204ENST00000606347 DHX9Q08211 1270 aaKnown RBP9.38□□□□□ -0.91
UCHL3-204ENST00000606347 DIXDC1Q155Q3 683 aa9.38□□□□□ -0.91
UCHL3-204ENST00000606347 ACDQ96AP0 544 aa9.38□□□□□ -0.91
UCHL3-204ENST00000606347 PRPF38BQ5VTL8 546 aaKnown RBP9.37□□□□□ -0.91
UCHL3-204ENST00000606347 FOXD4L5Q5VV16 416 aaPredicted RBP9.37□□□□□ -0.91
UCHL3-204ENST00000606347 ZNF837Q96EG3 531 aaPredicted RBP9.37□□□□□ -0.91
UCHL3-204ENST00000606347 PLCB2Q00722 1185 aa9.36□□□□□ -0.91
UCHL3-204ENST00000606347 RIC3Q7Z5B4 369 aa9.36□□□□□ -0.91
UCHL3-204ENST00000606347 SLC10A4Q96EP9 437 aa9.36□□□□□ -0.91
UCHL3-204ENST00000606347 NUTM2BA6NNL0 878 aaPredicted RBP9.35□□□□□ -0.91
UCHL3-204ENST00000606347 NUTM2EB1AL46 878 aaPredicted RBP9.35□□□□□ -0.91
UCHL3-204ENST00000606347 NUTM2DQ5VT03 806 aaPredicted RBP9.35□□□□□ -0.91
UCHL3-204ENST00000606347 FOXR1Q6PIV2 292 aa9.35□□□□□ -0.91
UCHL3-204ENST00000606347 LYSMD3Q7Z3D4 306 aa9.35□□□□□ -0.91
UCHL3-204ENST00000606347 NUTM2AQ8IVF1 878 aaPredicted RBP9.35□□□□□ -0.91
UCHL3-204ENST00000606347 RHOQP17081 205 aa9.34□□□□□ -0.91
UCHL3-204ENST00000606347 INTS6LQ5JSJ4 861 aaKnown RBP9.34□□□□□ -0.91
UCHL3-204ENST00000606347 RIPOR1Q6ZS17 1223 aa9.33□□□□□ -0.92
UCHL3-204ENST00000606347 PRICKLE2Q7Z3G6 844 aa9.33□□□□□ -0.92
UCHL3-204ENST00000606347 ARHGAP9Q9BRR9 750 aa9.33□□□□□ -0.92
UCHL3-204ENST00000606347 SNRPNP63162 240 aaKnown RBP9.32□□□□□ -0.92
UCHL3-204ENST00000606347 TRIM22Q8IYM9 498 aa9.32□□□□□ -0.92
UCHL3-204ENST00000606347 GPKOWQ92917 476 aaPredicted RBP eCLIP9.32□□□□□ -0.92
UCHL3-204ENST00000606347 CDV3Q9UKY7 258 aaKnown RBP9.32□□□□□ -0.92
UCHL3-204ENST00000606347 QPCTQ16769 361 aa9.31□□□□□ -0.92
UCHL3-204ENST00000606347 TMPRSS4Q9NRS4 437 aa9.31□□□□□ -0.92
UCHL3-204ENST00000606347 ADH1AP07327 375 aa9.3□□□□□ -0.92
UCHL3-204ENST00000606347 DBN1Q16643 649 aa9.3□□□□□ -0.92
UCHL3-204ENST00000606347 AMHR2Q16671 573 aa9.3□□□□□ -0.92
UCHL3-204ENST00000606347 GTPBP3Q969Y2 492 aaKnown RBP9.3□□□□□ -0.92
UCHL3-204ENST00000606347 GMCL1Q96IK5 515 aa9.3□□□□□ -0.92
UCHL3-204ENST00000606347 OIP5O43482 229 aa9.29□□□□□ -0.92
UCHL3-204ENST00000606347 PTGIRP43119 386 aa9.29□□□□□ -0.92
UCHL3-204ENST00000606347 RAB15P59190 212 aa9.29□□□□□ -0.92
UCHL3-204ENST00000606347 ZBTB33Q86T24 672 aa9.29□□□□□ -0.92
UCHL3-204ENST00000606347 HELBQ8NG08 1087 aaPredicted RBP9.29□□□□□ -0.92
UCHL3-204ENST00000606347 ZNF784Q8NCA9 323 aaPredicted RBP9.28□□□□□ -0.92
UCHL3-204ENST00000606347 MKL2Q9ULH7 1088 aa9.28□□□□□ -0.92
UCHL3-204ENST00000606347 MX2P20592 715 aa9.27□□□□□ -0.93
UCHL3-204ENST00000606347 COL8A1P27658 744 aa9.27□□□□□ -0.93
UCHL3-204ENST00000606347 TRERF1Q96PN7 1200 aa9.27□□□□□ -0.93
UCHL3-204ENST00000606347 LRRC4BQ9NT99 713 aa9.27□□□□□ -0.93
UCHL3-204ENST00000606347 LIMD1Q9UGP4 676 aa9.27□□□□□ -0.93
UCHL3-204ENST00000606347 ADD1P35611 737 aaKnown RBP9.26□□□□□ -0.93
UCHL3-204ENST00000606347 LCE3BQ5TA77 95 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms