RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 MAP3K19Q56UN5 1328 aa21.25■□□□□ 0.99
CDCA3-211ENST00000603043 NPC1L1Q9UHC9 1359 aa21.25■□□□□ 0.99
CDCA3-211ENST00000603043 ATRNO75882 1429 aa21.25■□□□□ 0.99
CDCA3-211ENST00000603043 CC2D1BQ5T0F9 858 aaKnown RBP21.25■□□□□ 0.99
CDCA3-211ENST00000603043 MORC1Q86VD1 984 aa21.25■□□□□ 0.99
CDCA3-211ENST00000603043 QTRT2Q9H974 415 aaKnown RBP21.25■□□□□ 0.99
CDCA3-211ENST00000603043 TNNT2P45379 298 aaPredicted RBP21.24■□□□□ 0.99
CDCA3-211ENST00000603043 RRS1Q15050 365 aaKnown RBP21.24■□□□□ 0.99
CDCA3-211ENST00000603043 COL5A2P05997 1499 aaPredicted RBP21.24■□□□□ 0.99
CDCA3-211ENST00000603043 STRN4Q9NRL3 753 aa21.23■□□□□ 0.99
CDCA3-211ENST00000603043 AXIN2Q9Y2T1 843 aa21.23■□□□□ 0.99
CDCA3-211ENST00000603043 EVA1CP58658 441 aa21.22■□□□□ 0.99
CDCA3-211ENST00000603043 AMPHP49418 695 aa21.21■□□□□ 0.99
CDCA3-211ENST00000603043 CNGB1Q14028 1251 aaPredicted RBP21.21■□□□□ 0.99
CDCA3-211ENST00000603043 PEAK1Q9H792 1746 aa21.21■□□□□ 0.99
CDCA3-211ENST00000603043 RTL1A6NKG5 1358 aa21.21■□□□□ 0.99
CDCA3-211ENST00000603043 VPS72Q15906 364 aa21.21■□□□□ 0.99
CDCA3-211ENST00000603043 BLMP54132 1417 aaPredicted RBP21.2■□□□□ 0.98
CDCA3-211ENST00000603043 IP6K1Q92551 441 aa21.2■□□□□ 0.98
CDCA3-211ENST00000603043 CCDC9Q9Y3X0 531 aaKnown RBP21.19■□□□□ 0.98
CDCA3-211ENST00000603043 HOXC9P31274 260 aa21.19■□□□□ 0.98
CDCA3-211ENST00000603043 EMILIN1Q9Y6C2 1016 aa21.19■□□□□ 0.98
CDCA3-211ENST00000603043 KIF24Q5T7B8 1368 aa21.19■□□□□ 0.98
CDCA3-211ENST00000603043 GLI3P10071 1580 aa21.18■□□□□ 0.98
CDCA3-211ENST00000603043 RXRBP28702 533 aa21.18■□□□□ 0.98
CDCA3-211ENST00000603043 GJD4Q96KN9 370 aaPredicted RBP21.18■□□□□ 0.98
CDCA3-211ENST00000603043 FLT4P35916 1363 aa21.18■□□□□ 0.98
CDCA3-211ENST00000603043 RBM6P78332 1123 aaKnown RBP21.17■□□□□ 0.98
CDCA3-211ENST00000603043 LARP1Q6PKG0 1096 aaKnown RBP21.17■□□□□ 0.98
CDCA3-211ENST00000603043 PPM1GO15355 546 aaPredicted RBP21.17■□□□□ 0.98
CDCA3-211ENST00000603043 POLKQ9UBT6 870 aa21.17■□□□□ 0.98
CDCA3-211ENST00000603043 ERBB3P21860 1342 aa21.16■□□□□ 0.98
CDCA3-211ENST00000603043 SPATA31A5Q5VU36 1347 aa21.16■□□□□ 0.98
CDCA3-211ENST00000603043 SPATA31A7Q8IWB4 1347 aa21.16■□□□□ 0.98
CDCA3-211ENST00000603043 WDR17Q8IZU2 1322 aa21.16■□□□□ 0.98
CDCA3-211ENST00000603043 CSB-PGBD3P0DP91 1061 aa21.16■□□□□ 0.98
CDCA3-211ENST00000603043 CRB1P82279 1406 aa21.15■□□□□ 0.98
CDCA3-211ENST00000603043 FAM208AQ9UK61 1670 aaKnown RBP21.15■□□□□ 0.98
CDCA3-211ENST00000603043 MYT1Q01538 1121 aa21.15■□□□□ 0.98
CDCA3-211ENST00000603043 SMG6Q86US8 1419 aaKnown RBP21.14■□□□□ 0.97
CDCA3-211ENST00000603043 TOM1L2Q6ZVM7 507 aa21.14■□□□□ 0.97
CDCA3-211ENST00000603043 ANKRD24Q8TF21 1146 aa21.14■□□□□ 0.97
CDCA3-211ENST00000603043 SPATA31A1Q5TZJ5 1347 aa21.13■□□□□ 0.97
CDCA3-211ENST00000603043 INSRP06213 1382 aa21.13■□□□□ 0.97
CDCA3-211ENST00000603043 HSP90AB2PQ58FF8 381 aa21.13■□□□□ 0.97
CDCA3-211ENST00000603043 USP35Q9P2H5 1018 aa21.13■□□□□ 0.97
CDCA3-211ENST00000603043 LTV1Q96GA3 475 aaPredicted RBP21.12■□□□□ 0.97
CDCA3-211ENST00000603043 CDK12Q9NYV4 1490 aaPredicted RBP21.11■□□□□ 0.97
CDCA3-211ENST00000603043 RGPD2P0DJD1 1756 aa21.11■□□□□ 0.97
CDCA3-211ENST00000603043 TCP11L2Q8N4U5 519 aa21.09■□□□□ 0.97
CDCA3-211ENST00000603043 NLRP2Q9NX02 1062 aa21.09■□□□□ 0.97
CDCA3-211ENST00000603043 WNK3Q9BYP7 1800 aa21.09■□□□□ 0.97
CDCA3-211ENST00000603043 RGS12O14924 1447 aa21.09■□□□□ 0.97
CDCA3-211ENST00000603043 FAM98CQ17RN3 349 aaKnown RBP21.08■□□□□ 0.97
CDCA3-211ENST00000603043 PARD3Q8TEW0 1356 aa21.08■□□□□ 0.97
CDCA3-211ENST00000603043 CARD10Q9BWT7 1032 aa21.08■□□□□ 0.96
CDCA3-211ENST00000603043 MTHFSP49914 203 aa21.07■□□□□ 0.96
CDCA3-211ENST00000603043 THRAP3Q9Y2W1 955 aaKnown RBP21.07■□□□□ 0.96
CDCA3-211ENST00000603043 ILDR2Q71H61 639 aa21.06■□□□□ 0.96
CDCA3-211ENST00000603043 THSD7AQ9UPZ6 1657 aa21.06■□□□□ 0.96
CDCA3-211ENST00000603043 BARGINQ6ZT62 677 aa21.06■□□□□ 0.96
CDCA3-211ENST00000603043 ONECUT3O60422 494 aaPredicted RBP21.05■□□□□ 0.96
CDCA3-211ENST00000603043 A0A0G2JS52 829 aa21.05■□□□□ 0.96
CDCA3-211ENST00000603043 BRWD3Q6RI45 1802 aa21.04■□□□□ 0.96
CDCA3-211ENST00000603043 PPP2R1AP30153 589 aa21.04■□□□□ 0.96
CDCA3-211ENST00000603043 EIF4A2Q14240 407 aaKnown RBP21.03■□□□□ 0.96
CDCA3-211ENST00000603043 RALBP1Q15311 655 aa21.03■□□□□ 0.96
CDCA3-211ENST00000603043 SEPT12Q8IYM1 358 aa21.03■□□□□ 0.96
CDCA3-211ENST00000603043 NBPF6Q5VWK0 638 aa21.02■□□□□ 0.96
CDCA3-211ENST00000603043 NBPF4Q96M43 638 aa21.02■□□□□ 0.96
CDCA3-211ENST00000603043 PARP4Q9UKK3 1724 aaKnown RBP21.02■□□□□ 0.96
CDCA3-211ENST00000603043 DISP2A7MBM2 1401 aa20.99■□□□□ 0.95
CDCA3-211ENST00000603043 LRRC37A3O60309 1634 aa20.99■□□□□ 0.95
CDCA3-211ENST00000603043 USHBP1Q8N6Y0 703 aa20.99■□□□□ 0.95
CDCA3-211ENST00000603043 CDCA7Q9BWT1 371 aaPredicted RBP20.99■□□□□ 0.95
CDCA3-211ENST00000603043 EYA1Q99502 592 aa20.98■□□□□ 0.95
CDCA3-211ENST00000603043 COL3A1P02461 1466 aaPredicted RBP20.98■□□□□ 0.95
CDCA3-211ENST00000603043 IL2RBP14784 551 aa20.97■□□□□ 0.95
CDCA3-211ENST00000603043 RGPD1P0DJD0 1748 aa20.97■□□□□ 0.95
CDCA3-211ENST00000603043 CFAP53Q96M91 514 aa20.97■□□□□ 0.95
CDCA3-211ENST00000603043 PRKRIP1Q9H875 184 aaPredicted RBP20.97■□□□□ 0.95
CDCA3-211ENST00000603043 NCAPD2Q15021 1401 aa20.97■□□□□ 0.95
CDCA3-211ENST00000603043 IL13P35225 146 aa20.96■□□□□ 0.95
CDCA3-211ENST00000603043 DIAPH1O60610 1272 aaKnown RBP20.96■□□□□ 0.95
CDCA3-211ENST00000603043 MYBBP1AQ9BQG0 1328 aaKnown RBP20.95■□□□□ 0.94
CDCA3-211ENST00000603043 IGSF1Q8N6C5 1336 aa20.95■□□□□ 0.94
CDCA3-211ENST00000603043 MEGF6O75095 1541 aa20.94■□□□□ 0.94
CDCA3-211ENST00000603043 EP400Q96L91 3159 aa20.94■□□□□ 0.94
CDCA3-211ENST00000603043 DDB1Q16531 1140 aa20.94■□□□□ 0.94
CDCA3-211ENST00000603043 KRT27Q7Z3Y8 459 aa20.94■□□□□ 0.94
CDCA3-211ENST00000603043 RAPGEF4Q8WZA2 1011 aa20.93■□□□□ 0.94
CDCA3-211ENST00000603043 TNS2Q63HR2 1409 aa20.92■□□□□ 0.94
CDCA3-211ENST00000603043 PDE3BQ13370 1112 aa20.91■□□□□ 0.94
CDCA3-211ENST00000603043 OVOS2A0A0G2JMS6 1433 aa20.91■□□□□ 0.94
CDCA3-211ENST00000603043 EXOC5O00471 708 aa20.9■□□□□ 0.94
CDCA3-211ENST00000603043 ANP32CO43423 234 aa20.9■□□□□ 0.94
CDCA3-211ENST00000603043 TATP17735 454 aaPredicted RBP20.89■□□□□ 0.93
CDCA3-211ENST00000603043 SHANK3Q9BYB0 1731 aa20.89■□□□□ 0.93
CDCA3-211ENST00000603043 SULT6B1Q6IMI4 303 aa20.88■□□□□ 0.93
CDCA3-211ENST00000603043 KDRP35968 1356 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms