RNA–Protein interactions for RNA: ENST00000591535.5

MBD1-225, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-225ENST00000591535 ANKRD26Q9UPS8 1709 aa19.23■□□□□ 0.67
MBD1-225ENST00000591535 CAMTA1Q9Y6Y1 1673 aa19.22■□□□□ 0.67
MBD1-225ENST00000591535 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.22■□□□□ 0.67
MBD1-225ENST00000591535 RXRBP28702 533 aa19.22■□□□□ 0.67
MBD1-225ENST00000591535 AXIN2Q9Y2T1 843 aa19.22■□□□□ 0.67
MBD1-225ENST00000591535 PPM1GO15355 546 aaPredicted RBP19.21■□□□□ 0.67
MBD1-225ENST00000591535 MAP3K19Q56UN5 1328 aa19.21■□□□□ 0.67
MBD1-225ENST00000591535 RGPD5Q99666 1765 aa19.21■□□□□ 0.67
MBD1-225ENST00000591535 COL18A1P39060 1754 aa19.2■□□□□ 0.66
MBD1-225ENST00000591535 NRAPQ86VF7 1730 aa19.2■□□□□ 0.66
MBD1-225ENST00000591535 LMO7Q8WWI1 1683 aa19.2■□□□□ 0.66
MBD1-225ENST00000591535 VPS72Q15906 364 aa19.2■□□□□ 0.66
MBD1-225ENST00000591535 ATRNO75882 1429 aa19.19■□□□□ 0.66
MBD1-225ENST00000591535 CSB-PGBD3P0DP91 1061 aa19.19■□□□□ 0.66
MBD1-225ENST00000591535 RBM6P78332 1123 aaKnown RBP19.19■□□□□ 0.66
MBD1-225ENST00000591535 GJD4Q96KN9 370 aaPredicted RBP19.19■□□□□ 0.66
MBD1-225ENST00000591535 IP6K1Q92551 441 aa19.18■□□□□ 0.66
MBD1-225ENST00000591535 MAP2P11137 1827 aaKnown RBP19.18■□□□□ 0.66
MBD1-225ENST00000591535 LARP1Q6PKG0 1096 aaKnown RBP19.18■□□□□ 0.66
MBD1-225ENST00000591535 USP35Q9P2H5 1018 aa19.18■□□□□ 0.66
MBD1-225ENST00000591535 COL5A2P05997 1499 aaPredicted RBP19.17■□□□□ 0.66
MBD1-225ENST00000591535 LTV1Q96GA3 475 aaPredicted RBP19.17■□□□□ 0.66
MBD1-225ENST00000591535 EMILIN1Q9Y6C2 1016 aa19.17■□□□□ 0.66
MBD1-225ENST00000591535 HOXC9P31274 260 aa19.16■□□□□ 0.66
MBD1-225ENST00000591535 TOM1L2Q6ZVM7 507 aa19.16■□□□□ 0.66
MBD1-225ENST00000591535 ABCC6O95255 1503 aa19.15■□□□□ 0.66
MBD1-225ENST00000591535 NPC1L1Q9UHC9 1359 aa19.15■□□□□ 0.66
MBD1-225ENST00000591535 ANKRD24Q8TF21 1146 aa19.14■□□□□ 0.66
MBD1-225ENST00000591535 SPATA31A5Q5VU36 1347 aa19.14■□□□□ 0.65
MBD1-225ENST00000591535 SPATA31A7Q8IWB4 1347 aa19.14■□□□□ 0.65
MBD1-225ENST00000591535 BLMP54132 1417 aaPredicted RBP19.14■□□□□ 0.65
MBD1-225ENST00000591535 POLKQ9UBT6 870 aa19.14■□□□□ 0.65
MBD1-225ENST00000591535 RTL1A6NKG5 1358 aa19.13■□□□□ 0.65
MBD1-225ENST00000591535 WDR17Q8IZU2 1322 aa19.13■□□□□ 0.65
MBD1-225ENST00000591535 A0A0G2JS52 829 aa19.13■□□□□ 0.65
MBD1-225ENST00000591535 MYT1Q01538 1121 aa19.13■□□□□ 0.65
MBD1-225ENST00000591535 HSP90AB2PQ58FF8 381 aa19.13■□□□□ 0.65
MBD1-225ENST00000591535 FLT4P35916 1363 aa19.13■□□□□ 0.65
MBD1-225ENST00000591535 SPATA31A1Q5TZJ5 1347 aa19.12■□□□□ 0.65
MBD1-225ENST00000591535 NLRP2Q9NX02 1062 aa19.12■□□□□ 0.65
MBD1-225ENST00000591535 ERBB3P21860 1342 aa19.12■□□□□ 0.65
MBD1-225ENST00000591535 CRB1P82279 1406 aa19.12■□□□□ 0.65
MBD1-225ENST00000591535 FAM98CQ17RN3 349 aaKnown RBP19.11■□□□□ 0.65
MBD1-225ENST00000591535 ILDR2Q71H61 639 aa19.11■□□□□ 0.65
MBD1-225ENST00000591535 KIF24Q5T7B8 1368 aa19.11■□□□□ 0.65
MBD1-225ENST00000591535 GLI3P10071 1580 aa19.11■□□□□ 0.65
MBD1-225ENST00000591535 PEAK1Q9H792 1746 aa19.11■□□□□ 0.65
MBD1-225ENST00000591535 TCP11L2Q8N4U5 519 aa19.1■□□□□ 0.65
MBD1-225ENST00000591535 INSRP06213 1382 aa19.09■□□□□ 0.65
MBD1-225ENST00000591535 SMG6Q86US8 1419 aaKnown RBP19.09■□□□□ 0.65
MBD1-225ENST00000591535 CARD10Q9BWT7 1032 aa19.07■□□□□ 0.64
MBD1-225ENST00000591535 MTHFSP49914 203 aa19.07■□□□□ 0.64
MBD1-225ENST00000591535 THRAP3Q9Y2W1 955 aaKnown RBP19.07■□□□□ 0.64
MBD1-225ENST00000591535 SEPT12Q8IYM1 358 aa19.06■□□□□ 0.64
MBD1-225ENST00000591535 RGS12O14924 1447 aa19.05■□□□□ 0.64
MBD1-225ENST00000591535 CDK12Q9NYV4 1490 aaPredicted RBP19.05■□□□□ 0.64
MBD1-225ENST00000591535 ONECUT3O60422 494 aaPredicted RBP19.04■□□□□ 0.64
MBD1-225ENST00000591535 BARGINQ6ZT62 677 aa19.04■□□□□ 0.64
MBD1-225ENST00000591535 FAM208AQ9UK61 1670 aaKnown RBP19.04■□□□□ 0.64
MBD1-225ENST00000591535 RGPD2P0DJD1 1756 aa19.04■□□□□ 0.64
MBD1-225ENST00000591535 NBPF6Q5VWK0 638 aa19.03■□□□□ 0.64
MBD1-225ENST00000591535 NBPF4Q96M43 638 aa19.03■□□□□ 0.64
MBD1-225ENST00000591535 PPP2R1AP30153 589 aa19.02■□□□□ 0.64
MBD1-225ENST00000591535 EIF4A2Q14240 407 aaKnown RBP19.02■□□□□ 0.64
MBD1-225ENST00000591535 RALBP1Q15311 655 aa19.01■□□□□ 0.63
MBD1-225ENST00000591535 USHBP1Q8N6Y0 703 aa19.01■□□□□ 0.63
MBD1-225ENST00000591535 PARD3Q8TEW0 1356 aa19■□□□□ 0.63
MBD1-225ENST00000591535 CDCA7Q9BWT1 371 aaPredicted RBP19■□□□□ 0.63
MBD1-225ENST00000591535 BRWD3Q6RI45 1802 aa18.99■□□□□ 0.63
MBD1-225ENST00000591535 IL2RBP14784 551 aa18.99■□□□□ 0.63
MBD1-225ENST00000591535 CFAP53Q96M91 514 aa18.99■□□□□ 0.63
MBD1-225ENST00000591535 PDE3BQ13370 1112 aa18.98■□□□□ 0.63
MBD1-225ENST00000591535 KRT27Q7Z3Y8 459 aa18.98■□□□□ 0.63
MBD1-225ENST00000591535 THSD7AQ9UPZ6 1657 aa18.97■□□□□ 0.63
MBD1-225ENST00000591535 DIAPH1O60610 1272 aaKnown RBP18.97■□□□□ 0.63
MBD1-225ENST00000591535 DDB1Q16531 1140 aa18.97■□□□□ 0.63
MBD1-225ENST00000591535 EYA1Q99502 592 aa18.97■□□□□ 0.63
MBD1-225ENST00000591535 WNK3Q9BYP7 1800 aa18.97■□□□□ 0.63
MBD1-225ENST00000591535 RAPGEF4Q8WZA2 1011 aa18.96■□□□□ 0.63
MBD1-225ENST00000591535 EXOC5O00471 708 aa18.96■□□□□ 0.63
MBD1-225ENST00000591535 IL13P35225 146 aa18.95■□□□□ 0.62
MBD1-225ENST00000591535 PARP4Q9UKK3 1724 aaKnown RBP18.95■□□□□ 0.62
MBD1-225ENST00000591535 PRKRIP1Q9H875 184 aaPredicted RBP18.94■□□□□ 0.62
MBD1-225ENST00000591535 EP400Q96L91 3159 aa18.94■□□□□ 0.62
MBD1-225ENST00000591535 DISP2A7MBM2 1401 aa18.93■□□□□ 0.62
MBD1-225ENST00000591535 TATP17735 454 aaPredicted RBP18.93■□□□□ 0.62
MBD1-225ENST00000591535 FAM182BQ5T319 152 aa18.93■□□□□ 0.62
MBD1-225ENST00000591535 U2SURPO15042 1029 aaKnown RBP18.92■□□□□ 0.62
MBD1-225ENST00000591535 MYBBP1AQ9BQG0 1328 aaKnown RBP18.92■□□□□ 0.62
MBD1-225ENST00000591535 IGSF1Q8N6C5 1336 aa18.91■□□□□ 0.62
MBD1-225ENST00000591535 LRRC37A3O60309 1634 aa18.91■□□□□ 0.62
MBD1-225ENST00000591535 ANP32CO43423 234 aa18.91■□□□□ 0.62
MBD1-225ENST00000591535 SULT6B1Q6IMI4 303 aa18.91■□□□□ 0.62
MBD1-225ENST00000591535 NUDCQ9Y266 331 aa18.9■□□□□ 0.62
MBD1-225ENST00000591535 MEGF6O75095 1541 aa18.9■□□□□ 0.62
MBD1-225ENST00000591535 COL3A1P02461 1466 aaPredicted RBP18.9■□□□□ 0.62
MBD1-225ENST00000591535 ZCRB1Q8TBF4 217 aaKnown RBP18.89■□□□□ 0.62
MBD1-225ENST00000591535 DDX54Q8TDD1 881 aaKnown RBP18.89■□□□□ 0.62
MBD1-225ENST00000591535 HMOX1P09601 288 aa18.89■□□□□ 0.61
MBD1-225ENST00000591535 AEBP1Q8IUX7 1158 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms