RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 ARHGEF25Q86VW2 580 aa17.46■□□□□ 0.39
DDX39A-213ENST00000590315 CCDC9Q9Y3X0 531 aaKnown RBP17.46■□□□□ 0.39
DDX39A-213ENST00000590315 SLIT2O94813 1529 aa17.46■□□□□ 0.39
DDX39A-213ENST00000590315 MAP3K19Q56UN5 1328 aa17.46■□□□□ 0.38
DDX39A-213ENST00000590315 CAMTA1Q9Y6Y1 1673 aa17.45■□□□□ 0.38
DDX39A-213ENST00000590315 EVA1CP58658 441 aa17.45■□□□□ 0.38
DDX39A-213ENST00000590315 AATKQ6ZMQ8 1374 aa17.44■□□□□ 0.38
DDX39A-213ENST00000590315 EMILIN1Q9Y6C2 1016 aa17.44■□□□□ 0.38
DDX39A-213ENST00000590315 WNK3Q9BYP7 1800 aa17.44■□□□□ 0.38
DDX39A-213ENST00000590315 RTL1A6NKG5 1358 aa17.43■□□□□ 0.38
DDX39A-213ENST00000590315 CSB-PGBD3P0DP91 1061 aa17.43■□□□□ 0.38
DDX39A-213ENST00000590315 LTV1Q96GA3 475 aaPredicted RBP17.43■□□□□ 0.38
DDX39A-213ENST00000590315 COL5A2P05997 1499 aaPredicted RBP17.43■□□□□ 0.38
DDX39A-213ENST00000590315 SMG6Q86US8 1419 aaKnown RBP17.42■□□□□ 0.38
DDX39A-213ENST00000590315 ZNF772Q68DY9 489 aaPredicted RBP17.42■□□□□ 0.38
DDX39A-213ENST00000590315 FLT4P35916 1363 aa17.41■□□□□ 0.38
DDX39A-213ENST00000590315 BLMP54132 1417 aaPredicted RBP17.41■□□□□ 0.38
DDX39A-213ENST00000590315 UNC5CLQ8IV45 518 aa17.41■□□□□ 0.38
DDX39A-213ENST00000590315 BCL9LQ86UU0 1499 aa17.41■□□□□ 0.38
DDX39A-213ENST00000590315 HOXC9P31274 260 aa17.4■□□□□ 0.38
DDX39A-213ENST00000590315 FNBP4Q8N3X1 1017 aaPredicted RBP17.4■□□□□ 0.38
DDX39A-213ENST00000590315 CDK12Q9NYV4 1490 aaPredicted RBP17.39■□□□□ 0.37
DDX39A-213ENST00000590315 IP6K1Q92551 441 aa17.39■□□□□ 0.37
DDX39A-213ENST00000590315 TRPC5Q9UL62 973 aaPredicted RBP17.39■□□□□ 0.37
DDX39A-213ENST00000590315 AXIN2Q9Y2T1 843 aa17.39■□□□□ 0.37
DDX39A-213ENST00000590315 TOM1L2Q6ZVM7 507 aa17.38■□□□□ 0.37
DDX39A-213ENST00000590315 ANKRD24Q8TF21 1146 aa17.38■□□□□ 0.37
DDX39A-213ENST00000590315 QTRT2Q9H974 415 aaKnown RBP17.38■□□□□ 0.37
DDX39A-213ENST00000590315 USP35Q9P2H5 1018 aa17.38■□□□□ 0.37
DDX39A-213ENST00000590315 POLKQ9UBT6 870 aa17.38■□□□□ 0.37
DDX39A-213ENST00000590315 PARD3Q8TEW0 1356 aa17.38■□□□□ 0.37
DDX39A-213ENST00000590315 KIF24Q5T7B8 1368 aa17.37■□□□□ 0.37
DDX39A-213ENST00000590315 ATRNO75882 1429 aa17.37■□□□□ 0.37
DDX39A-213ENST00000590315 GLI3P10071 1580 aa17.36■□□□□ 0.37
DDX39A-213ENST00000590315 A0A0G2JS52 829 aa17.36■□□□□ 0.37
DDX39A-213ENST00000590315 MTHFSP49914 203 aa17.36■□□□□ 0.37
DDX39A-213ENST00000590315 MYT1Q01538 1121 aa17.36■□□□□ 0.37
DDX39A-213ENST00000590315 LARP1Q6PKG0 1096 aaKnown RBP17.36■□□□□ 0.37
DDX39A-213ENST00000590315 CRB1P82279 1406 aa17.36■□□□□ 0.37
DDX39A-213ENST00000590315 ANP32CO43423 234 aa17.35■□□□□ 0.37
DDX39A-213ENST00000590315 PPP2R1AP30153 589 aa17.35■□□□□ 0.37
DDX39A-213ENST00000590315 RALBP1Q15311 655 aa17.35■□□□□ 0.37
DDX39A-213ENST00000590315 HSP90AB2PQ58FF8 381 aa17.35■□□□□ 0.37
DDX39A-213ENST00000590315 NLRP2Q9NX02 1062 aa17.35■□□□□ 0.37
DDX39A-213ENST00000590315 ERBB3P21860 1342 aa17.35■□□□□ 0.37
DDX39A-213ENST00000590315 WDR17Q8IZU2 1322 aa17.35■□□□□ 0.37
DDX39A-213ENST00000590315 INSRP06213 1382 aa17.35■□□□□ 0.37
DDX39A-213ENST00000590315 VPS72Q15906 364 aa17.34■□□□□ 0.37
DDX39A-213ENST00000590315 BRWD3Q6RI45 1802 aa17.34■□□□□ 0.37
DDX39A-213ENST00000590315 CFAP53Q96M91 514 aa17.34■□□□□ 0.37
DDX39A-213ENST00000590315 RGS17Q9UGC6 210 aaPredicted RBP17.34■□□□□ 0.37
DDX39A-213ENST00000590315 PARP4Q9UKK3 1724 aaKnown RBP17.34■□□□□ 0.37
DDX39A-213ENST00000590315 MYBBP1AQ9BQG0 1328 aaKnown RBP17.32■□□□□ 0.36
DDX39A-213ENST00000590315 POTEAQ6S8J7 498 aa17.32■□□□□ 0.36
DDX39A-213ENST00000590315 RXRBP28702 533 aa17.31■□□□□ 0.36
DDX39A-213ENST00000590315 GJD4Q96KN9 370 aaPredicted RBP17.31■□□□□ 0.36
DDX39A-213ENST00000590315 PRKRIP1Q9H875 184 aaPredicted RBP17.31■□□□□ 0.36
DDX39A-213ENST00000590315 SPATA31A5Q5VU36 1347 aa17.3■□□□□ 0.36
DDX39A-213ENST00000590315 SPATA31A7Q8IWB4 1347 aa17.3■□□□□ 0.36
DDX39A-213ENST00000590315 RBM6P78332 1123 aaKnown RBP17.3■□□□□ 0.36
DDX39A-213ENST00000590315 RGPD1P0DJD0 1748 aa17.3■□□□□ 0.36
DDX39A-213ENST00000590315 SPATA31A1Q5TZJ5 1347 aa17.29■□□□□ 0.36
DDX39A-213ENST00000590315 EIF4A2Q14240 407 aaKnown RBP17.29■□□□□ 0.36
DDX39A-213ENST00000590315 FAM98CQ17RN3 349 aaKnown RBP17.29■□□□□ 0.36
DDX39A-213ENST00000590315 USHBP1Q8N6Y0 703 aa17.29■□□□□ 0.36
DDX39A-213ENST00000590315 LRRC37A3O60309 1634 aa17.29■□□□□ 0.36
DDX39A-213ENST00000590315 DIAPH1O60610 1272 aaKnown RBP17.28■□□□□ 0.36
DDX39A-213ENST00000590315 TCP11L2Q8N4U5 519 aa17.28■□□□□ 0.36
DDX39A-213ENST00000590315 COL3A1P02461 1466 aaPredicted RBP17.28■□□□□ 0.36
DDX39A-213ENST00000590315 THSD7AQ9UPZ6 1657 aa17.28■□□□□ 0.36
DDX39A-213ENST00000590315 DIEXFQ68CQ4 756 aaKnown RBP17.27■□□□□ 0.36
DDX39A-213ENST00000590315 CARD10Q9BWT7 1032 aa17.27■□□□□ 0.36
DDX39A-213ENST00000590315 U2SURPO15042 1029 aaKnown RBP17.26■□□□□ 0.35
DDX39A-213ENST00000590315 RGS12O14924 1447 aa17.25■□□□□ 0.35
DDX39A-213ENST00000590315 NBPF6Q5VWK0 638 aa17.25■□□□□ 0.35
DDX39A-213ENST00000590315 NBPF4Q96M43 638 aa17.25■□□□□ 0.35
DDX39A-213ENST00000590315 KAT6BQ8WYB5 2073 aa17.25■□□□□ 0.35
DDX39A-213ENST00000590315 VIRMAQ69YN4 1812 aaKnown RBP17.24■□□□□ 0.35
DDX39A-213ENST00000590315 THRAP3Q9Y2W1 955 aaKnown RBP17.24■□□□□ 0.35
DDX39A-213ENST00000590315 EYA1Q99502 592 aa17.23■□□□□ 0.35
DDX39A-213ENST00000590315 NUDCQ9Y266 331 aa17.23■□□□□ 0.35
DDX39A-213ENST00000590315 SHANK3Q9BYB0 1731 aa17.23■□□□□ 0.35
DDX39A-213ENST00000590315 PKD1L3Q7Z443 1732 aa17.22■□□□□ 0.35
DDX39A-213ENST00000590315 IL13P35225 146 aa17.22■□□□□ 0.35
DDX39A-213ENST00000590315 RAPGEF4Q8WZA2 1011 aa17.22■□□□□ 0.35
DDX39A-213ENST00000590315 IL2RBP14784 551 aa17.21■□□□□ 0.35
DDX39A-213ENST00000590315 TATP17735 454 aaPredicted RBP17.21■□□□□ 0.35
DDX39A-213ENST00000590315 SEPT12Q8IYM1 358 aa17.21■□□□□ 0.35
DDX39A-213ENST00000590315 MEGF6O75095 1541 aa17.21■□□□□ 0.34
DDX39A-213ENST00000590315 IGSF1Q8N6C5 1336 aa17.21■□□□□ 0.34
DDX39A-213ENST00000590315 HMOX1P09601 288 aa17.2■□□□□ 0.34
DDX39A-213ENST00000590315 SULT6B1Q6IMI4 303 aa17.2■□□□□ 0.34
DDX39A-213ENST00000590315 BARGINQ6ZT62 677 aa17.2■□□□□ 0.34
DDX39A-213ENST00000590315 U2AF1L5P0DN76 240 aaPredicted RBP17.19■□□□□ 0.34
DDX39A-213ENST00000590315 U2AF1Q01081 240 aaKnown RBP eCLIP17.19■□□□□ 0.342e-6■■□□□ 11.6
DDX39A-213ENST00000590315 CDCA7Q9BWT1 371 aaPredicted RBP17.19■□□□□ 0.34
DDX39A-213ENST00000590315 DISP2A7MBM2 1401 aa17.19■□□□□ 0.34
DDX39A-213ENST00000590315 WDR43Q15061 677 aaKnown RBP eCLIP17.18■□□□□ 0.34
DDX39A-213ENST00000590315 DDB1Q16531 1140 aa17.18■□□□□ 0.34
DDX39A-213ENST00000590315 AEBP1Q8IUX7 1158 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms