RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 STRN4Q9NRL3 753 aa28.92■■■□□ 2.22
R3HDM4-204ENST00000589428 ANP32CO43423 234 aa28.91■■■□□ 2.22
R3HDM4-204ENST00000589428 EVA1CP58658 441 aa28.91■■■□□ 2.22
R3HDM4-204ENST00000589428 VPS72Q15906 364 aa28.91■■■□□ 2.22
R3HDM4-204ENST00000589428 CCDC9Q9Y3X0 531 aaKnown RBP28.91■■■□□ 2.22
R3HDM4-204ENST00000589428 COL5A2P05997 1499 aaPredicted RBP28.91■■■□□ 2.22
R3HDM4-204ENST00000589428 RXRBP28702 533 aa28.9■■■□□ 2.22
R3HDM4-204ENST00000589428 RBM6P78332 1123 aaKnown RBP28.9■■■□□ 2.22
R3HDM4-204ENST00000589428 MAP3K19Q56UN5 1328 aa28.9■■■□□ 2.22
R3HDM4-204ENST00000589428 FBLN1P23142 703 aa28.89■■■□□ 2.22
R3HDM4-204ENST00000589428 RRS1Q15050 365 aaKnown RBP28.89■■■□□ 2.21
R3HDM4-204ENST00000589428 MORC1Q86VD1 984 aa28.89■■■□□ 2.21
R3HDM4-204ENST00000589428 AMPHP49418 695 aa28.88■■■□□ 2.21
R3HDM4-204ENST00000589428 GJD4Q96KN9 370 aaPredicted RBP28.88■■■□□ 2.21
R3HDM4-204ENST00000589428 AXIN2Q9Y2T1 843 aa28.87■■■□□ 2.21
R3HDM4-204ENST00000589428 RTL1A6NKG5 1358 aa28.87■■■□□ 2.21
R3HDM4-204ENST00000589428 PRKRIP1Q9H875 184 aaPredicted RBP28.86■■■□□ 2.21
R3HDM4-204ENST00000589428 NPC1L1Q9UHC9 1359 aa28.86■■■□□ 2.21
R3HDM4-204ENST00000589428 BLMP54132 1417 aaPredicted RBP28.86■■■□□ 2.21
R3HDM4-204ENST00000589428 RGPD5Q99666 1765 aa28.86■■■□□ 2.21
R3HDM4-204ENST00000589428 TNNT2P45379 298 aaPredicted RBP28.86■■■□□ 2.21
R3HDM4-204ENST00000589428 CNGB1Q14028 1251 aaPredicted RBP28.86■■■□□ 2.21
R3HDM4-204ENST00000589428 CC2D1BQ5T0F9 858 aaKnown RBP28.86■■■□□ 2.21
R3HDM4-204ENST00000589428 GLI3P10071 1580 aa28.85■■■□□ 2.21
R3HDM4-204ENST00000589428 IP6K1Q92551 441 aa28.84■■■□□ 2.21
R3HDM4-204ENST00000589428 KIF24Q5T7B8 1368 aa28.83■■■□□ 2.21
R3HDM4-204ENST00000589428 LARP1Q6PKG0 1096 aaKnown RBP28.83■■■□□ 2.21
R3HDM4-204ENST00000589428 SPATA31A5Q5VU36 1347 aa28.82■■■□□ 2.2
R3HDM4-204ENST00000589428 SPATA31A7Q8IWB4 1347 aa28.82■■■□□ 2.2
R3HDM4-204ENST00000589428 CSB-PGBD3P0DP91 1061 aa28.82■■■□□ 2.2
R3HDM4-204ENST00000589428 HOXC9P31274 260 aa28.82■■■□□ 2.2
R3HDM4-204ENST00000589428 CDK12Q9NYV4 1490 aaPredicted RBP28.81■■■□□ 2.2
R3HDM4-204ENST00000589428 FLT4P35916 1363 aa28.81■■■□□ 2.2
R3HDM4-204ENST00000589428 PARD3Q8TEW0 1356 aa28.81■■■□□ 2.2
R3HDM4-204ENST00000589428 WDR17Q8IZU2 1322 aa28.81■■■□□ 2.2
R3HDM4-204ENST00000589428 CRB1P82279 1406 aa28.81■■■□□ 2.2
R3HDM4-204ENST00000589428 EMILIN1Q9Y6C2 1016 aa28.8■■■□□ 2.2
R3HDM4-204ENST00000589428 ERBB3P21860 1342 aa28.8■■■□□ 2.2
R3HDM4-204ENST00000589428 TOM1L2Q6ZVM7 507 aa28.8■■■□□ 2.2
R3HDM4-204ENST00000589428 SPATA31A1Q5TZJ5 1347 aa28.79■■■□□ 2.2
R3HDM4-204ENST00000589428 PEAK1Q9H792 1746 aa28.79■■■□□ 2.2
R3HDM4-204ENST00000589428 MAP2P11137 1827 aaKnown RBP28.79■■■□□ 2.2
R3HDM4-204ENST00000589428 PPM1GO15355 546 aaPredicted RBP28.78■■■□□ 2.2
R3HDM4-204ENST00000589428 ILDR2Q71H61 639 aa28.78■■■□□ 2.2
R3HDM4-204ENST00000589428 ANKRD24Q8TF21 1146 aa28.78■■■□□ 2.2
R3HDM4-204ENST00000589428 USP35Q9P2H5 1018 aa28.77■■■□□ 2.2
R3HDM4-204ENST00000589428 RGS12O14924 1447 aa28.77■■■□□ 2.2
R3HDM4-204ENST00000589428 POLKQ9UBT6 870 aa28.76■■■□□ 2.19
R3HDM4-204ENST00000589428 SMG6Q86US8 1419 aaKnown RBP28.75■■■□□ 2.19
R3HDM4-204ENST00000589428 RALBP1Q15311 655 aa28.75■■■□□ 2.19
R3HDM4-204ENST00000589428 LTV1Q96GA3 475 aaPredicted RBP28.74■■■□□ 2.19
R3HDM4-204ENST00000589428 INSRP06213 1382 aa28.74■■■□□ 2.19
R3HDM4-204ENST00000589428 FAM208AQ9UK61 1670 aaKnown RBP28.74■■■□□ 2.19
R3HDM4-204ENST00000589428 A0A0G2JS52 829 aa28.73■■■□□ 2.19
R3HDM4-204ENST00000589428 MYT1Q01538 1121 aa28.73■■■□□ 2.19
R3HDM4-204ENST00000589428 FAM98CQ17RN3 349 aaKnown RBP28.73■■■□□ 2.19
R3HDM4-204ENST00000589428 TCP11L2Q8N4U5 519 aa28.73■■■□□ 2.19
R3HDM4-204ENST00000589428 HSP90AB2PQ58FF8 381 aa28.72■■■□□ 2.19
R3HDM4-204ENST00000589428 NLRP2Q9NX02 1062 aa28.72■■■□□ 2.19
R3HDM4-204ENST00000589428 THRAP3Q9Y2W1 955 aaKnown RBP28.72■■■□□ 2.19
R3HDM4-204ENST00000589428 CARD10Q9BWT7 1032 aa28.71■■■□□ 2.19
R3HDM4-204ENST00000589428 BARGINQ6ZT62 677 aa28.69■■■□□ 2.18
R3HDM4-204ENST00000589428 MYBBP1AQ9BQG0 1328 aaKnown RBP28.68■■■□□ 2.18
R3HDM4-204ENST00000589428 THSD7AQ9UPZ6 1657 aa28.67■■■□□ 2.18
R3HDM4-204ENST00000589428 ONECUT3O60422 494 aaPredicted RBP28.67■■■□□ 2.18
R3HDM4-204ENST00000589428 SEPT12Q8IYM1 358 aa28.67■■■□□ 2.18
R3HDM4-204ENST00000589428 CCER2I3L3R5 266 aa28.66■■■□□ 2.18
R3HDM4-204ENST00000589428 WNK3Q9BYP7 1800 aa28.64■■■□□ 2.18
R3HDM4-204ENST00000589428 MTHFSP49914 203 aa28.63■■■□□ 2.17
R3HDM4-204ENST00000589428 CDCA7Q9BWT1 371 aaPredicted RBP28.61■■■□□ 2.17
R3HDM4-204ENST00000589428 RGPD2P0DJD1 1756 aa28.61■■■□□ 2.17
R3HDM4-204ENST00000589428 PPP2R1AP30153 589 aa28.6■■■□□ 2.17
R3HDM4-204ENST00000589428 CCDC184Q52MB2 194 aa28.6■■■□□ 2.17
R3HDM4-204ENST00000589428 PARP4Q9UKK3 1724 aaKnown RBP28.59■■■□□ 2.17
R3HDM4-204ENST00000589428 BRWD3Q6RI45 1802 aa28.59■■■□□ 2.17
R3HDM4-204ENST00000589428 DISP2A7MBM2 1401 aa28.58■■■□□ 2.17
R3HDM4-204ENST00000589428 EIF4A2Q14240 407 aaKnown RBP28.58■■■□□ 2.17
R3HDM4-204ENST00000589428 NBPF6Q5VWK0 638 aa28.58■■■□□ 2.17
R3HDM4-204ENST00000589428 NBPF4Q96M43 638 aa28.58■■■□□ 2.17
R3HDM4-204ENST00000589428 IL2RBP14784 551 aa28.56■■■□□ 2.16
R3HDM4-204ENST00000589428 LRRC37A3O60309 1634 aa28.56■■■□□ 2.16
R3HDM4-204ENST00000589428 KRT27Q7Z3Y8 459 aa28.55■■■□□ 2.16
R3HDM4-204ENST00000589428 USHBP1Q8N6Y0 703 aa28.55■■■□□ 2.16
R3HDM4-204ENST00000589428 MRS2Q9HD23 443 aa28.54■■■□□ 2.16
R3HDM4-204ENST00000589428 DDB1Q16531 1140 aa28.53■■■□□ 2.16
R3HDM4-204ENST00000589428 PDE3BQ13370 1112 aa28.52■■■□□ 2.16
R3HDM4-204ENST00000589428 CFAP53Q96M91 514 aa28.52■■■□□ 2.16
R3HDM4-204ENST00000589428 EYA1Q99502 592 aa28.52■■■□□ 2.16
R3HDM4-204ENST00000589428 NCAPD2Q15021 1401 aa28.5■■■□□ 2.15
R3HDM4-204ENST00000589428 TNS2Q63HR2 1409 aa28.5■■■□□ 2.15
R3HDM4-204ENST00000589428 RAPGEF4Q8WZA2 1011 aa28.5■■■□□ 2.15
R3HDM4-204ENST00000589428 COL3A1P02461 1466 aaPredicted RBP28.49■■■□□ 2.15
R3HDM4-204ENST00000589428 MEGF6O75095 1541 aa28.49■■■□□ 2.15
R3HDM4-204ENST00000589428 DIAPH1O60610 1272 aaKnown RBP28.49■■■□□ 2.15
R3HDM4-204ENST00000589428 IGSF1Q8N6C5 1336 aa28.49■■■□□ 2.15
R3HDM4-204ENST00000589428 IL13P35225 146 aa28.48■■■□□ 2.15
R3HDM4-204ENST00000589428 EXOC5O00471 708 aa28.47■■■□□ 2.15
R3HDM4-204ENST00000589428 OVOS2A0A0G2JMS6 1433 aa28.46■■■□□ 2.15
R3HDM4-204ENST00000589428 TATP17735 454 aaPredicted RBP28.46■■■□□ 2.15
R3HDM4-204ENST00000589428 RGPD1P0DJD0 1748 aa28.45■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms