RNA–Protein interactions for RNA: ENST00000577706.1

TOP2A-203, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-203ENST00000577706 LILRB3O75022 631 aa8.44□□□□□ -1.06
TOP2A-203ENST00000577706 SUZ12Q15022 739 aaKnown RBP8.44□□□□□ -1.06
TOP2A-203ENST00000577706 SKIV2LQ15477 1246 aaKnown RBP8.44□□□□□ -1.06
TOP2A-203ENST00000577706 TUSC1Q2TAM9 212 aa8.44□□□□□ -1.06
TOP2A-203ENST00000577706 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.44□□□□□ -1.063e-6■□□□□ 9.1
TOP2A-203ENST00000577706 TRMT44Q8IYL2 757 aaKnown RBP8.44□□□□□ -1.06
TOP2A-203ENST00000577706 CCDC116Q8IYX3 515 aa8.44□□□□□ -1.06
TOP2A-203ENST00000577706 IL27Q8NEV9 243 aa8.44□□□□□ -1.06
TOP2A-203ENST00000577706 RTL5Q5HYW3 569 aaPredicted RBP8.43□□□□□ -1.06
TOP2A-203ENST00000577706 SH3BP5LQ7L8J4 393 aa8.43□□□□□ -1.06
TOP2A-203ENST00000577706 TTLL8A6PVC2 850 aa8.42□□□□□ -1.06
TOP2A-203ENST00000577706 SH3D19Q5HYK7 790 aa8.42□□□□□ -1.06
TOP2A-203ENST00000577706 FBXO31Q5XUX0 539 aaPredicted RBP8.42□□□□□ -1.06
TOP2A-203ENST00000577706 GPR161Q8N6U8 529 aaKnown RBP8.42□□□□□ -1.06
TOP2A-203ENST00000577706 HELBQ8NG08 1087 aaPredicted RBP8.42□□□□□ -1.06
TOP2A-203ENST00000577706 GSK3AP49840 483 aa8.41□□□□□ -1.06
TOP2A-203ENST00000577706 KRT76Q01546 638 aa8.41□□□□□ -1.06
TOP2A-203ENST00000577706 PTSQ03393 145 aa8.41□□□□□ -1.06
TOP2A-203ENST00000577706 KCTD17Q8N5Z5 321 aa8.41□□□□□ -1.06
TOP2A-203ENST00000577706 CNTNAP3BQ96NU0 1288 aa8.41□□□□□ -1.06
TOP2A-203ENST00000577706 CNTNAP3Q9BZ76 1288 aa8.41□□□□□ -1.06
TOP2A-203ENST00000577706 FIGNL2A6NMB9 653 aa8.4□□□□□ -1.06
TOP2A-203ENST00000577706 CARD14Q9BXL6 1004 aa8.4□□□□□ -1.06
TOP2A-203ENST00000577706 TMEM151AQ8N4L1 468 aa8.39□□□□□ -1.07
TOP2A-203ENST00000577706 GPKOWQ92917 476 aaPredicted RBP eCLIP8.39□□□□□ -1.07
TOP2A-203ENST00000577706 PGPEP1Q9NXJ5 209 aa8.39□□□□□ -1.07
TOP2A-203ENST00000577706 ATP1B4Q9UN42 357 aaPredicted RBP8.39□□□□□ -1.07
TOP2A-203ENST00000577706 ERFEQ4G0M1 354 aa8.38□□□□□ -1.07
TOP2A-203ENST00000577706 PPP1R26Q5T8A7 1209 aaPredicted RBP8.38□□□□□ -1.07
TOP2A-203ENST00000577706 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.38□□□□□ -1.07
TOP2A-203ENST00000577706 ADAMTS8Q9UP79 889 aa8.38□□□□□ -1.07
TOP2A-203ENST00000577706 GDF11O95390 407 aa8.37□□□□□ -1.07
TOP2A-203ENST00000577706 RASSF7Q02833 373 aa8.37□□□□□ -1.07
TOP2A-203ENST00000577706 CBLBQ13191 982 aa8.37□□□□□ -1.07
TOP2A-203ENST00000577706 Q6ZVU0 165 aa8.37□□□□□ -1.07
TOP2A-203ENST00000577706 NANOS1Q8WY41 292 aaKnown RBP8.37□□□□□ -1.07
TOP2A-203ENST00000577706 COL25A1Q9BXS0 654 aaPredicted RBP8.37□□□□□ -1.07
TOP2A-203ENST00000577706 SPINT1O43278 529 aa8.36□□□□□ -1.07
TOP2A-203ENST00000577706 CCDC155Q8N6L0 562 aa8.36□□□□□ -1.07
TOP2A-203ENST00000577706 CTDSPL2Q05D32 466 aa8.34□□□□□ -1.07
TOP2A-203ENST00000577706 PPP2R2DQ66LE6 453 aa8.34□□□□□ -1.07
TOP2A-203ENST00000577706 PDXDC2PQ6P474 469 aa8.34□□□□□ -1.07
TOP2A-203ENST00000577706 KCTD15Q96SI1 283 aaPredicted RBP8.34□□□□□ -1.07
TOP2A-203ENST00000577706 ARHGAP9Q9BRR9 750 aa8.34□□□□□ -1.07
TOP2A-203ENST00000577706 GOPCQ9HD26 462 aa8.34□□□□□ -1.07
TOP2A-203ENST00000577706 CDV3Q9UKY7 258 aaKnown RBP8.34□□□□□ -1.07
TOP2A-203ENST00000577706 SLC35F4A4IF30 521 aa8.33□□□□□ -1.08
TOP2A-203ENST00000577706 DHX9Q08211 1270 aaKnown RBP8.33□□□□□ -1.08
TOP2A-203ENST00000577706 ZNF385CQ66K41 422 aaPredicted RBP8.33□□□□□ -1.08
TOP2A-203ENST00000577706 SVOPQ8N4V2 548 aa8.33□□□□□ -1.08
TOP2A-203ENST00000577706 RNFT1Q5M7Z0 435 aa8.32□□□□□ -1.08
TOP2A-203ENST00000577706 VWA5B2Q8N398 1253 aa8.32□□□□□ -1.08
TOP2A-203ENST00000577706 SLC10A4Q96EP9 437 aa8.32□□□□□ -1.08
TOP2A-203ENST00000577706 PCMTD1Q96MG8 357 aaPredicted RBP8.32□□□□□ -1.08
TOP2A-203ENST00000577706 ITGA6P23229 1130 aa8.31□□□□□ -1.08
TOP2A-203ENST00000577706 SV2AQ7L0J3 742 aa8.31□□□□□ -1.08
TOP2A-203ENST00000577706 ZBTB33Q86T24 672 aa8.31□□□□□ -1.08
TOP2A-203ENST00000577706 FKBPLQ9UIM3 349 aa8.31□□□□□ -1.08
TOP2A-203ENST00000577706 CDC14CA4D256 554 aa8.3□□□□□ -1.08
TOP2A-203ENST00000577706 CTSOP43234 321 aaPredicted RBP8.3□□□□□ -1.08
TOP2A-203ENST00000577706 RELBQ01201 579 aa8.3□□□□□ -1.08
TOP2A-203ENST00000577706 AGBL1Q96MI9 1066 aa8.3□□□□□ -1.08
TOP2A-203ENST00000577706 AP1G2O75843 785 aa8.29□□□□□ -1.08
TOP2A-203ENST00000577706 IGHA1P01876 353 aa8.29□□□□□ -1.08
TOP2A-203ENST00000577706 SLURP2P0DP57 97 aa8.29□□□□□ -1.08
TOP2A-203ENST00000577706 RFC5P40937 340 aa8.29□□□□□ -1.08
TOP2A-203ENST00000577706 LRRN4Q8WUT4 740 aa8.29□□□□□ -1.08
TOP2A-203ENST00000577706 INTS6LQ5JSJ4 861 aaKnown RBP8.28□□□□□ -1.08
TOP2A-203ENST00000577706 WHAMMQ8TF30 809 aa8.28□□□□□ -1.08
TOP2A-203ENST00000577706 INSM2Q96T92 566 aaPredicted RBP8.28□□□□□ -1.08
TOP2A-203ENST00000577706 POLMQ9NP87 494 aaPredicted RBP8.28□□□□□ -1.08
TOP2A-203ENST00000577706 DNMT3AQ9Y6K1 912 aaPredicted RBP8.28□□□□□ -1.08
TOP2A-203ENST00000577706 ZC3H4Q9UPT8 1303 aaKnown RBP8.27□□□□□ -1.09
TOP2A-203ENST00000577706 ARHGEF15O94989 841 aa8.26□□□□□ -1.09
TOP2A-203ENST00000577706 IRS1P35568 1242 aa8.26□□□□□ -1.09
TOP2A-203ENST00000577706 MARSP56192 900 aaKnown RBP8.26□□□□□ -1.09
TOP2A-203ENST00000577706 FOXK2Q01167 660 aa8.26□□□□□ -1.09
TOP2A-203ENST00000577706 PTK2Q05397 1052 aa8.26□□□□□ -1.09
TOP2A-203ENST00000577706 KANK3Q6NY19 840 aa8.26□□□□□ -1.09
TOP2A-203ENST00000577706 ZNF395Q9H8N7 513 aaPredicted RBP8.26□□□□□ -1.09
TOP2A-203ENST00000577706 NR6A1Q15406 480 aa8.25□□□□□ -1.09
TOP2A-203ENST00000577706 RNF217Q8TC41 542 aa8.25□□□□□ -1.09
TOP2A-203ENST00000577706 GPSM3Q9Y4H4 160 aa8.24□□□□□ -1.09
TOP2A-203ENST00000577706 SENP3-EIF4A1A0A087X0R7 540 aa8.23□□□□□ -1.09
TOP2A-203ENST00000577706 NBPF20Q3BBV1 942 aa8.23□□□□□ -1.09
TOP2A-203ENST00000577706 GPAT2Q6NUI2 795 aa8.23□□□□□ -1.09
TOP2A-203ENST00000577706 ADAM32Q8TC27 787 aa8.23□□□□□ -1.09
TOP2A-203ENST00000577706 EPS8L1Q8TE68 723 aa8.23□□□□□ -1.09
TOP2A-203ENST00000577706 SCARF2Q96GP6 870 aaPredicted RBP8.23□□□□□ -1.09
TOP2A-203ENST00000577706 OCSTAMPQ9BR26 566 aa8.23□□□□□ -1.09
TOP2A-203ENST00000577706 HMX1Q9NP08 348 aaPredicted RBP8.23□□□□□ -1.09
TOP2A-203ENST00000577706 TMPRSS4Q9NRS4 437 aa8.23□□□□□ -1.09
TOP2A-203ENST00000577706 ADAMTS2O95450 1211 aa8.22□□□□□ -1.09
TOP2A-203ENST00000577706 USP17L8P0C7I0 530 aa8.22□□□□□ -1.09
TOP2A-203ENST00000577706 TMEM259Q4ZIN3 620 aa8.22□□□□□ -1.09
TOP2A-203ENST00000577706 ADH1AP07327 375 aa8.21□□□□□ -1.1
TOP2A-203ENST00000577706 RAB15P59190 212 aa8.21□□□□□ -1.1
TOP2A-203ENST00000577706 LYPD4Q6UWN0 246 aa8.21□□□□□ -1.1
TOP2A-203ENST00000577706 ZNF784Q8NCA9 323 aaPredicted RBP8.21□□□□□ -1.1
TOP2A-203ENST00000577706 PTGIRP43119 386 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms