RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 GJD4Q96KN9 370 aaPredicted RBP17.15■□□□□ 0.34
RNF40-211ENST00000567365 RGPD5Q99666 1765 aa17.15■□□□□ 0.34
RNF40-211ENST00000567365 AXIN2Q9Y2T1 843 aa17.14■□□□□ 0.33
RNF40-211ENST00000567365 CGNL1Q0VF96 1302 aa17.14■□□□□ 0.33
RNF40-211ENST00000567365 SOX12O15370 315 aa17.12■□□□□ 0.33
RNF40-211ENST00000567365 ONECUT3O60422 494 aaPredicted RBP17.12■□□□□ 0.33
RNF40-211ENST00000567365 SPATA31A5Q5VU36 1347 aa17.12■□□□□ 0.33
RNF40-211ENST00000567365 SPATA31A7Q8IWB4 1347 aa17.12■□□□□ 0.33
RNF40-211ENST00000567365 EP400Q96L91 3159 aa17.11■□□□□ 0.33
RNF40-211ENST00000567365 FBLN1P23142 703 aa17.11■□□□□ 0.33
RNF40-211ENST00000567365 AMER1Q5JTC6 1135 aaPredicted RBP17.11■□□□□ 0.33
RNF40-211ENST00000567365 NSD2O96028 1365 aa17.11■□□□□ 0.33
RNF40-211ENST00000567365 MAP3K19Q56UN5 1328 aa17.1■□□□□ 0.33
RNF40-211ENST00000567365 SPATA31A1Q5TZJ5 1347 aa17.1■□□□□ 0.33
RNF40-211ENST00000567365 PEAK1Q9H792 1746 aa17.1■□□□□ 0.33
RNF40-211ENST00000567365 LARP1Q6PKG0 1096 aaKnown RBP17.09■□□□□ 0.33
RNF40-211ENST00000567365 THSD7AQ9UPZ6 1657 aa17.09■□□□□ 0.33
RNF40-211ENST00000567365 BLMP54132 1417 aaPredicted RBP17.08■□□□□ 0.32
RNF40-211ENST00000567365 IP6K1Q92551 441 aa17.08■□□□□ 0.32
RNF40-211ENST00000567365 KIF24Q5T7B8 1368 aa17.07■□□□□ 0.32
RNF40-211ENST00000567365 NPC1L1Q9UHC9 1359 aa17.07■□□□□ 0.32
RNF40-211ENST00000567365 WDR17Q8IZU2 1322 aa17.07■□□□□ 0.32
RNF40-211ENST00000567365 CRB1P82279 1406 aa17.06■□□□□ 0.32
RNF40-211ENST00000567365 RTL1A6NKG5 1358 aa17.06■□□□□ 0.32
RNF40-211ENST00000567365 ERBB3P21860 1342 aa17.06■□□□□ 0.32
RNF40-211ENST00000567365 STRN4Q9NRL3 753 aa17.06■□□□□ 0.32
RNF40-211ENST00000567365 KNSTRNQ9Y448 316 aa17.06■□□□□ 0.32
RNF40-211ENST00000567365 MAP2P11137 1827 aaKnown RBP17.05■□□□□ 0.32
RNF40-211ENST00000567365 BRWD3Q6RI45 1802 aa17.05■□□□□ 0.32
RNF40-211ENST00000567365 ZBTB7CA1YPR0 619 aa17.05■□□□□ 0.32
RNF40-211ENST00000567365 RRS1Q15050 365 aaKnown RBP17.05■□□□□ 0.32
RNF40-211ENST00000567365 HOXC9P31274 260 aa17.04■□□□□ 0.32
RNF40-211ENST00000567365 EVA1CP58658 441 aa17.04■□□□□ 0.32
RNF40-211ENST00000567365 SMG6Q86US8 1419 aaKnown RBP17.04■□□□□ 0.32
RNF40-211ENST00000567365 FAM208AQ9UK61 1670 aaKnown RBP17.04■□□□□ 0.32
RNF40-211ENST00000567365 WNK3Q9BYP7 1800 aa17.03■□□□□ 0.32
RNF40-211ENST00000567365 BARGINQ6ZT62 677 aa17.03■□□□□ 0.32
RNF40-211ENST00000567365 FAM98CQ17RN3 349 aaKnown RBP17.02■□□□□ 0.32
RNF40-211ENST00000567365 CARD10Q9BWT7 1032 aa17.02■□□□□ 0.32
RNF40-211ENST00000567365 POLKQ9UBT6 870 aa17.02■□□□□ 0.32
RNF40-211ENST00000567365 CCDC9Q9Y3X0 531 aaKnown RBP17.02■□□□□ 0.32
RNF40-211ENST00000567365 EMILIN1Q9Y6C2 1016 aa17.02■□□□□ 0.32
RNF40-211ENST00000567365 DISP2A7MBM2 1401 aa17.02■□□□□ 0.31
RNF40-211ENST00000567365 INSRP06213 1382 aa17.02■□□□□ 0.31
RNF40-211ENST00000567365 FLT4P35916 1363 aa17.02■□□□□ 0.31
RNF40-211ENST00000567365 PARP4Q9UKK3 1724 aaKnown RBP17.01■□□□□ 0.31
RNF40-211ENST00000567365 SEPT12Q8IYM1 358 aa17.01■□□□□ 0.31
RNF40-211ENST00000567365 TCP11L2Q8N4U5 519 aa17.01■□□□□ 0.31
RNF40-211ENST00000567365 THRAP3Q9Y2W1 955 aaKnown RBP17.01■□□□□ 0.31
RNF40-211ENST00000567365 ANKRD24Q8TF21 1146 aa17■□□□□ 0.31
RNF40-211ENST00000567365 RGPD2P0DJD1 1756 aa17■□□□□ 0.31
RNF40-211ENST00000567365 AMPHP49418 695 aa16.99■□□□□ 0.31
RNF40-211ENST00000567365 HSP90AB2PQ58FF8 381 aa16.99■□□□□ 0.31
RNF40-211ENST00000567365 TOM1L2Q6ZVM7 507 aa16.99■□□□□ 0.31
RNF40-211ENST00000567365 NCAPD2Q15021 1401 aa16.97■□□□□ 0.31
RNF40-211ENST00000567365 MORC1Q86VD1 984 aa16.97■□□□□ 0.31
RNF40-211ENST00000567365 USP35Q9P2H5 1018 aa16.97■□□□□ 0.31
RNF40-211ENST00000567365 LRRC37A3O60309 1634 aa16.96■□□□□ 0.31
RNF40-211ENST00000567365 CSB-PGBD3P0DP91 1061 aa16.95■□□□□ 0.3
RNF40-211ENST00000567365 TNNT2P45379 298 aaPredicted RBP16.95■□□□□ 0.3
RNF40-211ENST00000567365 CC2D1BQ5T0F9 858 aaKnown RBP16.95■□□□□ 0.3
RNF40-211ENST00000567365 SRCAPQ6ZRS2 3230 aa16.93■□□□□ 0.3
RNF40-211ENST00000567365 NBPF6Q5VWK0 638 aa16.93■□□□□ 0.3
RNF40-211ENST00000567365 LTV1Q96GA3 475 aaPredicted RBP16.93■□□□□ 0.3
RNF40-211ENST00000567365 NBPF4Q96M43 638 aa16.93■□□□□ 0.3
RNF40-211ENST00000567365 NLRP2Q9NX02 1062 aa16.93■□□□□ 0.3
RNF40-211ENST00000567365 KRT27Q7Z3Y8 459 aa16.92■□□□□ 0.3
RNF40-211ENST00000567365 CCDC125Q86Z20 511 aa16.92■□□□□ 0.3
RNF40-211ENST00000567365 CDCA7Q9BWT1 371 aaPredicted RBP16.92■□□□□ 0.3
RNF40-211ENST00000567365 RGPD1P0DJD0 1748 aa16.9■□□□□ 0.3
RNF40-211ENST00000567365 PPM1GO15355 546 aaPredicted RBP16.9■□□□□ 0.3
RNF40-211ENST00000567365 DDX10Q13206 875 aaKnown RBP16.9■□□□□ 0.3
RNF40-211ENST00000567365 EIF4A2Q14240 407 aaKnown RBP16.9■□□□□ 0.3
RNF40-211ENST00000567365 DEFB132Q7Z7B7 95 aa16.9■□□□□ 0.3
RNF40-211ENST00000567365 TNS2Q63HR2 1409 aa16.89■□□□□ 0.29
RNF40-211ENST00000567365 COL3A1P02461 1466 aaPredicted RBP16.89■□□□□ 0.29
RNF40-211ENST00000567365 SHANK3Q9BYB0 1731 aa16.89■□□□□ 0.29
RNF40-211ENST00000567365 MEGF6O75095 1541 aa16.89■□□□□ 0.29
RNF40-211ENST00000567365 PARD3Q8TEW0 1356 aa16.89■□□□□ 0.29
RNF40-211ENST00000567365 MTHFSP49914 203 aa16.88■□□□□ 0.29
RNF40-211ENST00000567365 BCL9O00512 1426 aa16.87■□□□□ 0.29
RNF40-211ENST00000567365 A0A0G2JS52 829 aa16.87■□□□□ 0.29
RNF40-211ENST00000567365 IL2RBP14784 551 aa16.87■□□□□ 0.29
RNF40-211ENST00000567365 MYT1Q01538 1121 aa16.87■□□□□ 0.29
RNF40-211ENST00000567365 DDB1Q16531 1140 aa16.87■□□□□ 0.29
RNF40-211ENST00000567365 EYA1Q99502 592 aa16.87■□□□□ 0.29
RNF40-211ENST00000567365 OVOS2A0A0G2JMS6 1433 aa16.87■□□□□ 0.29
RNF40-211ENST00000567365 ZNF316A6NFI3 1004 aaPredicted RBP16.86■□□□□ 0.29
RNF40-211ENST00000567365 IGSF1Q8N6C5 1336 aa16.86■□□□□ 0.29
RNF40-211ENST00000567365 IL13P35225 146 aa16.85■□□□□ 0.29
RNF40-211ENST00000567365 FAM182BQ5T319 152 aa16.85■□□□□ 0.29
RNF40-211ENST00000567365 USHBP1Q8N6Y0 703 aa16.85■□□□□ 0.29
RNF40-211ENST00000567365 MARCH10Q8NA82 808 aaPredicted RBP16.85■□□□□ 0.29
RNF40-211ENST00000567365 PKD1L3Q7Z443 1732 aa16.84■□□□□ 0.29
RNF40-211ENST00000567365 SBF2Q86WG5 1849 aa16.84■□□□□ 0.29
RNF40-211ENST00000567365 PDE3BQ13370 1112 aa16.84■□□□□ 0.29
RNF40-211ENST00000567365 EXOC5O00471 708 aa16.83■□□□□ 0.28
RNF40-211ENST00000567365 PPP2R1AP30153 589 aa16.83■□□□□ 0.28
RNF40-211ENST00000567365 KDRP35968 1356 aa16.83■□□□□ 0.28
RNF40-211ENST00000567365 PLEKHG2Q9H7P9 1386 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms