RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 HOXC9P31274 260 aa16.95■□□□□ 0.3
KARS-204ENST00000564578 MAP2P11137 1827 aaKnown RBP16.94■□□□□ 0.3
KARS-204ENST00000564578 PEAK1Q9H792 1746 aa16.94■□□□□ 0.3
KARS-204ENST00000564578 USP21Q9UK80 565 aa16.94■□□□□ 0.3
KARS-204ENST00000564578 PLCH1Q4KWH8 1693 aa16.94■□□□□ 0.3
KARS-204ENST00000564578 PPM1GO15355 546 aaPredicted RBP16.93■□□□□ 0.3
KARS-204ENST00000564578 AMPHP49418 695 aa16.93■□□□□ 0.3
KARS-204ENST00000564578 HSP90AB2PQ58FF8 381 aa16.93■□□□□ 0.3
KARS-204ENST00000564578 UNC5CLQ8IV45 518 aa16.93■□□□□ 0.3
KARS-204ENST00000564578 KIF24Q5T7B8 1368 aa16.93■□□□□ 0.3
KARS-204ENST00000564578 SMG6Q86US8 1419 aaKnown RBP16.93■□□□□ 0.3
KARS-204ENST00000564578 COL5A2P05997 1499 aaPredicted RBP16.92■□□□□ 0.3
KARS-204ENST00000564578 ABCC6O95255 1503 aa16.92■□□□□ 0.3
KARS-204ENST00000564578 PPP2R1AP30153 589 aa16.92■□□□□ 0.3
KARS-204ENST00000564578 MTHFSP49914 203 aa16.92■□□□□ 0.3
KARS-204ENST00000564578 PRKRIP1Q9H875 184 aaPredicted RBP16.92■□□□□ 0.3
KARS-204ENST00000564578 RTL1A6NKG5 1358 aa16.91■□□□□ 0.3
KARS-204ENST00000564578 FLT4P35916 1363 aa16.91■□□□□ 0.3
KARS-204ENST00000564578 NWD2Q9ULI1 1742 aa16.91■□□□□ 0.3
KARS-204ENST00000564578 RGPD5Q99666 1765 aa16.91■□□□□ 0.3
KARS-204ENST00000564578 RALBP1Q15311 655 aa16.9■□□□□ 0.3
KARS-204ENST00000564578 STRN4Q9NRL3 753 aa16.9■□□□□ 0.3
KARS-204ENST00000564578 ERBB3P21860 1342 aa16.9■□□□□ 0.3
KARS-204ENST00000564578 BLMP54132 1417 aaPredicted RBP16.9■□□□□ 0.3
KARS-204ENST00000564578 LARP1Q6PKG0 1096 aaKnown RBP16.9■□□□□ 0.3
KARS-204ENST00000564578 INSRP06213 1382 aa16.9■□□□□ 0.3
KARS-204ENST00000564578 NRAPQ86VF7 1730 aa16.89■□□□□ 0.3
KARS-204ENST00000564578 ZNF772Q68DY9 489 aaPredicted RBP16.89■□□□□ 0.29
KARS-204ENST00000564578 EVA1CP58658 441 aa16.88■□□□□ 0.29
KARS-204ENST00000564578 ANKRD24Q8TF21 1146 aa16.88■□□□□ 0.29
KARS-204ENST00000564578 PHF23Q9BUL5 403 aaPredicted RBP16.88■□□□□ 0.29
KARS-204ENST00000564578 QTRT2Q9H974 415 aaKnown RBP16.88■□□□□ 0.29
KARS-204ENST00000564578 WDR17Q8IZU2 1322 aa16.88■□□□□ 0.29
KARS-204ENST00000564578 VPS72Q15906 364 aa16.88■□□□□ 0.29
KARS-204ENST00000564578 POTEAQ6S8J7 498 aa16.88■□□□□ 0.29
KARS-204ENST00000564578 ATRNO75882 1429 aa16.87■□□□□ 0.29
KARS-204ENST00000564578 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.87■□□□□ 0.29
KARS-204ENST00000564578 LTV1Q96GA3 475 aaPredicted RBP16.87■□□□□ 0.29
KARS-204ENST00000564578 CDK12Q9NYV4 1490 aaPredicted RBP16.87■□□□□ 0.29
KARS-204ENST00000564578 TRPC5Q9UL62 973 aaPredicted RBP16.86■□□□□ 0.29
KARS-204ENST00000564578 SPATA31A5Q5VU36 1347 aa16.85■□□□□ 0.29
KARS-204ENST00000564578 SPATA31A7Q8IWB4 1347 aa16.85■□□□□ 0.29
KARS-204ENST00000564578 EIF4A2Q14240 407 aaKnown RBP16.85■□□□□ 0.29
KARS-204ENST00000564578 GJD4Q96KN9 370 aaPredicted RBP16.85■□□□□ 0.29
KARS-204ENST00000564578 SPATA31A1Q5TZJ5 1347 aa16.84■□□□□ 0.29
KARS-204ENST00000564578 MYBBP1AQ9BQG0 1328 aaKnown RBP16.84■□□□□ 0.29
KARS-204ENST00000564578 CSB-PGBD3P0DP91 1061 aa16.84■□□□□ 0.29
KARS-204ENST00000564578 CRB1P82279 1406 aa16.84■□□□□ 0.29
KARS-204ENST00000564578 NBPF6Q5VWK0 638 aa16.83■□□□□ 0.28
KARS-204ENST00000564578 TOM1L2Q6ZVM7 507 aa16.83■□□□□ 0.28
KARS-204ENST00000564578 NBPF4Q96M43 638 aa16.83■□□□□ 0.28
KARS-204ENST00000564578 ANP32CO43423 234 aa16.82■□□□□ 0.28
KARS-204ENST00000564578 IL13P35225 146 aa16.82■□□□□ 0.28
KARS-204ENST00000564578 CARD10Q9BWT7 1032 aa16.82■□□□□ 0.28
KARS-204ENST00000564578 USP35Q9P2H5 1018 aa16.82■□□□□ 0.28
KARS-204ENST00000564578 COL3A1P02461 1466 aaPredicted RBP16.82■□□□□ 0.28
KARS-204ENST00000564578 NLRP2Q9NX02 1062 aa16.82■□□□□ 0.28
KARS-204ENST00000564578 CCDC9Q9Y3X0 531 aaKnown RBP16.82■□□□□ 0.28
KARS-204ENST00000564578 DIEXFQ68CQ4 756 aaKnown RBP16.81■□□□□ 0.28
KARS-204ENST00000564578 EYA1Q99502 592 aa16.81■□□□□ 0.28
KARS-204ENST00000564578 GLI3P10071 1580 aa16.81■□□□□ 0.28
KARS-204ENST00000564578 RBM6P78332 1123 aaKnown RBP16.8■□□□□ 0.28
KARS-204ENST00000564578 ONECUT3O60422 494 aaPredicted RBP16.79■□□□□ 0.28
KARS-204ENST00000564578 TCP11L2Q8N4U5 519 aa16.79■□□□□ 0.28
KARS-204ENST00000564578 RGPD2P0DJD1 1756 aa16.79■□□□□ 0.28
KARS-204ENST00000564578 DIAPH1O60610 1272 aaKnown RBP16.78■□□□□ 0.28
KARS-204ENST00000564578 RXRBP28702 533 aa16.78■□□□□ 0.28
KARS-204ENST00000564578 USHBP1Q8N6Y0 703 aa16.78■□□□□ 0.28
KARS-204ENST00000564578 NCAPD2Q15021 1401 aa16.78■□□□□ 0.28
KARS-204ENST00000564578 FAM98CQ17RN3 349 aaKnown RBP16.78■□□□□ 0.28
KARS-204ENST00000564578 CCDC184Q52MB2 194 aa16.78■□□□□ 0.28
KARS-204ENST00000564578 BARGINQ6ZT62 677 aa16.78■□□□□ 0.28
KARS-204ENST00000564578 THRAP3Q9Y2W1 955 aaKnown RBP16.78■□□□□ 0.28
KARS-204ENST00000564578 IGSF1Q8N6C5 1336 aa16.77■□□□□ 0.28
KARS-204ENST00000564578 CFAP53Q96M91 514 aa16.77■□□□□ 0.28
KARS-204ENST00000564578 FAM208AQ9UK61 1670 aaKnown RBP16.76■□□□□ 0.27
KARS-204ENST00000564578 RGPD1P0DJD0 1748 aa16.75■□□□□ 0.27
KARS-204ENST00000564578 EP400Q96L91 3159 aa16.75■□□□□ 0.27
KARS-204ENST00000564578 DISP2A7MBM2 1401 aa16.74■□□□□ 0.27
KARS-204ENST00000564578 AEBP1Q8IUX7 1158 aa16.74■□□□□ 0.27
KARS-204ENST00000564578 KDRP35968 1356 aa16.73■□□□□ 0.27
KARS-204ENST00000564578 SULT6B1Q6IMI4 303 aa16.72■□□□□ 0.27
KARS-204ENST00000564578 MEGF6O75095 1541 aa16.72■□□□□ 0.27
KARS-204ENST00000564578 U2SURPO15042 1029 aaKnown RBP16.72■□□□□ 0.27
KARS-204ENST00000564578 IL2RBP14784 551 aa16.72■□□□□ 0.27
KARS-204ENST00000564578 SEPT12Q8IYM1 358 aa16.72■□□□□ 0.27
KARS-204ENST00000564578 RGS12O14924 1447 aa16.71■□□□□ 0.27
KARS-204ENST00000564578 HMOX1P09601 288 aa16.71■□□□□ 0.27
KARS-204ENST00000564578 THSD7AQ9UPZ6 1657 aa16.71■□□□□ 0.27
KARS-204ENST00000564578 MIER1Q8N108 512 aa16.7■□□□□ 0.26
KARS-204ENST00000564578 CDCA7Q9BWT1 371 aaPredicted RBP16.7■□□□□ 0.26
KARS-204ENST00000564578 NUDCQ9Y266 331 aa16.7■□□□□ 0.26
KARS-204ENST00000564578 U2AF1L5P0DN76 240 aaPredicted RBP16.69■□□□□ 0.26
KARS-204ENST00000564578 U2AF1Q01081 240 aaKnown RBP eCLIP16.69■□□□□ 0.26
KARS-204ENST00000564578 RAPGEF4Q8WZA2 1011 aa16.69■□□□□ 0.26
KARS-204ENST00000564578 A0A0G2JS52 829 aa16.68■□□□□ 0.26
KARS-204ENST00000564578 WNK3Q9BYP7 1800 aa16.68■□□□□ 0.26
KARS-204ENST00000564578 OVOS2A0A0G2JMS6 1433 aa16.68■□□□□ 0.26
KARS-204ENST00000564578 RSPH6AQ9H0K4 717 aa16.67■□□□□ 0.26
KARS-204ENST00000564578 MRS2Q9HD23 443 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms