RNA–Protein interactions for RNA: ENST00000559328.5

MARK3-219, Transcript of microtubule affinity regulating kinase 3, human

TSL 4

Gene MARK3, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-219	ENST00000559328	BCL9L	Q86UU0	1499 aa		27.9	■■■□□ 2.06
MARK3-219	ENST00000559328	USP21	Q9UK80	565 aa		27.9	■■■□□ 2.06
MARK3-219	ENST00000559328	AMPH	P49418	695 aa		27.89	■■■□□ 2.06
MARK3-219	ENST00000559328	POLK	Q9UBT6	870 aa		27.88	■■■□□ 2.05
MARK3-219	ENST00000559328	AXIN2	Q9Y2T1	843 aa		27.88	■■■□□ 2.05
MARK3-219	ENST00000559328	EMILIN1	Q9Y6C2	1016 aa		27.88	■■■□□ 2.05
MARK3-219	ENST00000559328	RTL1	A6NKG5	1358 aa		27.87	■■■□□ 2.05
MARK3-219	ENST00000559328	UNC5CL	Q8IV45	518 aa		27.87	■■■□□ 2.05
MARK3-219	ENST00000559328	IP6K1	Q92551	441 aa		27.87	■■■□□ 2.05
MARK3-219	ENST00000559328	HOXC9	P31274	260 aa		27.86	■■■□□ 2.05
MARK3-219	ENST00000559328	ZNF772	Q68DY9	489 aa	Predicted RBP	27.86	■■■□□ 2.05
MARK3-219	ENST00000559328	RGS17	Q9UGC6	210 aa	Predicted RBP	27.86	■■■□□ 2.05
MARK3-219	ENST00000559328	KIF24	Q5T7B8	1368 aa		27.86	■■■□□ 2.05
MARK3-219	ENST00000559328	COL5A2	P05997	1499 aa	Predicted RBP	27.85	■■■□□ 2.05
MARK3-219	ENST00000559328	BLM	P54132	1417 aa	Predicted RBP	27.84	■■■□□ 2.05
MARK3-219	ENST00000559328	PPM1G	O15355	546 aa	Predicted RBP	27.84	■■■□□ 2.05
MARK3-219	ENST00000559328	FLT4	P35916	1363 aa		27.84	■■■□□ 2.05
MARK3-219	ENST00000559328	PARD3	Q8TEW0	1356 aa		27.84	■■■□□ 2.05
MARK3-219	ENST00000559328	SMG6	Q86US8	1419 aa	Known RBP	27.84	■■■□□ 2.05
MARK3-219	ENST00000559328	EVA1C	P58658	441 aa		27.83	■■■□□ 2.05
MARK3-219	ENST00000559328	STRN4	Q9NRL3	753 aa		27.83	■■■□□ 2.05
MARK3-219	ENST00000559328	ATRN	O75882	1429 aa		27.81	■■■□□ 2.04
MARK3-219	ENST00000559328	TRPC5	Q9UL62	973 aa	Predicted RBP	27.8	■■■□□ 2.04
MARK3-219	ENST00000559328	FAM208A	Q9UK61	1670 aa	Known RBP	27.79	■■■□□ 2.04
MARK3-219	ENST00000559328	HSP90AB2P	Q58FF8	381 aa		27.79	■■■□□ 2.04
MARK3-219	ENST00000559328	QTRT2	Q9H974	415 aa	Known RBP	27.79	■■■□□ 2.04
MARK3-219	ENST00000559328	RGPD2	P0DJD1	1756 aa		27.78	■■■□□ 2.04
MARK3-219	ENST00000559328	CDK12	Q9NYV4	1490 aa	Predicted RBP	27.78	■■■□□ 2.04
MARK3-219	ENST00000559328	INSR	P06213	1382 aa		27.78	■■■□□ 2.04
MARK3-219	ENST00000559328	MTHFS	P49914	203 aa		27.78	■■■□□ 2.04
MARK3-219	ENST00000559328	RALBP1	Q15311	655 aa		27.78	■■■□□ 2.04
MARK3-219	ENST00000559328	VPS72	Q15906	364 aa		27.78	■■■□□ 2.04
MARK3-219	ENST00000559328	ANKRD24	Q8TF21	1146 aa		27.78	■■■□□ 2.04
MARK3-219	ENST00000559328	ERBB3	P21860	1342 aa		27.77	■■■□□ 2.04
MARK3-219	ENST00000559328	PPP2R1A	P30153	589 aa		27.77	■■■□□ 2.04
MARK3-219	ENST00000559328	LARP1	Q6PKG0	1096 aa	Known RBP	27.77	■■■□□ 2.04
MARK3-219	ENST00000559328	WDR17	Q8IZU2	1322 aa		27.76	■■■□□ 2.03
MARK3-219	ENST00000559328	CSB-PGBD3	P0DP91	1061 aa		27.76	■■■□□ 2.03
MARK3-219	ENST00000559328	LTV1	Q96GA3	475 aa	Predicted RBP	27.76	■■■□□ 2.03
MARK3-219	ENST00000559328	POTEA	Q6S8J7	498 aa		27.75	■■■□□ 2.03
MARK3-219	ENST00000559328	CCDC9	Q9Y3X0	531 aa	Known RBP	27.75	■■■□□ 2.03
MARK3-219	ENST00000559328	PRKRIP1	Q9H875	184 aa	Predicted RBP	27.74	■■■□□ 2.03
MARK3-219	ENST00000559328	CRB1	P82279	1406 aa		27.74	■■■□□ 2.03
MARK3-219	ENST00000559328	GLI3	P10071	1580 aa		27.73	■■■□□ 2.03
MARK3-219	ENST00000559328	TOM1L2	Q6ZVM7	507 aa		27.73	■■■□□ 2.03
MARK3-219	ENST00000559328	SPATA31A5	Q5VU36	1347 aa		27.72	■■■□□ 2.03
MARK3-219	ENST00000559328	SPATA31A7	Q8IWB4	1347 aa		27.72	■■■□□ 2.03
MARK3-219	ENST00000559328	GJD4	Q96KN9	370 aa	Predicted RBP	27.72	■■■□□ 2.03
MARK3-219	ENST00000559328	SPATA31A1	Q5TZJ5	1347 aa		27.7	■■■□□ 2.03
MARK3-219	ENST00000559328	ANP32C	O43423	234 aa		27.68	■■■□□ 2.02
MARK3-219	ENST00000559328	RBM6	P78332	1123 aa	Known RBP	27.68	■■■□□ 2.02
MARK3-219	ENST00000559328	EIF4A2	Q14240	407 aa	Known RBP	27.68	■■■□□ 2.02
MARK3-219	ENST00000559328	NLRP2	Q9NX02	1062 aa		27.68	■■■□□ 2.02
MARK3-219	ENST00000559328	USP35	Q9P2H5	1018 aa		27.68	■■■□□ 2.02
MARK3-219	ENST00000559328	WNK3	Q9BYP7	1800 aa		27.68	■■■□□ 2.02
MARK3-219	ENST00000559328	MYBBP1A	Q9BQG0	1328 aa	Known RBP	27.67	■■■□□ 2.02
MARK3-219	ENST00000559328	RXRB	P28702	533 aa		27.67	■■■□□ 2.02
MARK3-219	ENST00000559328	CARD10	Q9BWT7	1032 aa		27.67	■■■□□ 2.02
MARK3-219	ENST00000559328	COL3A1	P02461	1466 aa	Predicted RBP	27.66	■■■□□ 2.02
MARK3-219	ENST00000559328	TCP11L2	Q8N4U5	519 aa		27.64	■■■□□ 2.02
MARK3-219	ENST00000559328	CFAP53	Q96M91	514 aa		27.64	■■■□□ 2.02
MARK3-219	ENST00000559328	NBPF6	Q5VWK0	638 aa		27.63	■■■□□ 2.01
MARK3-219	ENST00000559328	NBPF4	Q96M43	638 aa		27.63	■■■□□ 2.01
MARK3-219	ENST00000559328	THRAP3	Q9Y2W1	955 aa	Known RBP	27.63	■■■□□ 2.01
MARK3-219	ENST00000559328	RGPD1	P0DJD0	1748 aa		27.62	■■■□□ 2.01
MARK3-219	ENST00000559328	DIAPH1	O60610	1272 aa	Known RBP	27.61	■■■□□ 2.01
MARK3-219	ENST00000559328	IL13	P35225	146 aa		27.61	■■■□□ 2.01
MARK3-219	ENST00000559328	FAM98C	Q17RN3	349 aa	Known RBP	27.6	■■■□□ 2.01
MARK3-219	ENST00000559328	BARGIN	Q6ZT62	677 aa		27.6	■■■□□ 2.01
MARK3-219	ENST00000559328	EYA1	Q99502	592 aa		27.6	■■■□□ 2.01
MARK3-219	ENST00000559328	THSD7A	Q9UPZ6	1657 aa		27.59	■■■□□ 2.01
MARK3-219	ENST00000559328	USHBP1	Q8N6Y0	703 aa		27.59	■■■□□ 2.01
MARK3-219	ENST00000559328	ONECUT3	O60422	494 aa	Predicted RBP	27.57	■■■□□ 2
MARK3-219	ENST00000559328	DIEXF	Q68CQ4	756 aa	Known RBP	27.57	■■■□□ 2
MARK3-219	ENST00000559328	PARP4	Q9UKK3	1724 aa	Known RBP	27.57	■■■□□ 2
MARK3-219	ENST00000559328	BRWD3	Q6RI45	1802 aa		27.57	■■■□□ 2
MARK3-219	ENST00000559328	NCAPD2	Q15021	1401 aa		27.57	■■■□□ 2
MARK3-219	ENST00000559328	IGSF1	Q8N6C5	1336 aa		27.56	■■■□□ 2
MARK3-219	ENST00000559328	DISP2	A7MBM2	1401 aa		27.55	■■■□□ 2
MARK3-219	ENST00000559328	RGS12	O14924	1447 aa		27.55	■■■□□ 2
MARK3-219	ENST00000559328		A0A0G2JS52	829 aa		27.54	■■■□□ 2
MARK3-219	ENST00000559328	MYT1	Q01538	1121 aa		27.54	■■■□□ 2
MARK3-219	ENST00000559328	IL2RB	P14784	551 aa		27.52	■■■□□ 2
MARK3-219	ENST00000559328	SEPT12	Q8IYM1	358 aa		27.52	■■■□□ 2
MARK3-219	ENST00000559328	CDCA7	Q9BWT1	371 aa	Predicted RBP	27.52	■■■□□ 2
MARK3-219	ENST00000559328	NUDC	Q9Y266	331 aa		27.52	■■■□□ 2
MARK3-219	ENST00000559328	LRRC37A3	O60309	1634 aa		27.52	■■■□□ 2
MARK3-219	ENST00000559328	U2SURP	O15042	1029 aa	Known RBP	27.51	■■□□□ 1.99
MARK3-219	ENST00000559328	MEGF6	O75095	1541 aa		27.5	■■□□□ 1.99
MARK3-219	ENST00000559328	SULT6B1	Q6IMI4	303 aa		27.49	■■□□□ 1.99
MARK3-219	ENST00000559328	RAPGEF4	Q8WZA2	1011 aa		27.49	■■□□□ 1.99
MARK3-219	ENST00000559328	AEBP1	Q8IUX7	1158 aa		27.48	■■□□□ 1.99
MARK3-219	ENST00000559328	KDR	P35968	1356 aa		27.47	■■□□□ 1.99
MARK3-219	ENST00000559328	HMOX1	P09601	288 aa		27.46	■■□□□ 1.99
MARK3-219	ENST00000559328	TAT	P17735	454 aa	Predicted RBP	27.46	■■□□□ 1.99
MARK3-219	ENST00000559328	SHANK3	Q9BYB0	1731 aa		27.45	■■□□□ 1.99
MARK3-219	ENST00000559328	OVOS2	A0A0G2JMS6	1433 aa		27.45	■■□□□ 1.98
MARK3-219	ENST00000559328	PKD1L3	Q7Z443	1732 aa		27.44	■■□□□ 1.98
MARK3-219	ENST00000559328	U2AF1L5	P0DN76	240 aa	Predicted RBP	27.44	■■□□□ 1.98
MARK3-219	ENST00000559328	U2AF1	Q01081	240 aa	Known RBP eCLIP	27.44	■■□□□ 1.98

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