RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 IP6K1Q92551 441 aa16.82■□□□□ 0.28
ABCD4-223ENST00000555904 C8orf37Q96NL8 207 aa16.82■□□□□ 0.28
ABCD4-223ENST00000555904 COL14A1Q05707 1796 aaKnown RBP16.82■□□□□ 0.28
ABCD4-223ENST00000555904 ILDR1Q86SU0 546 aaPredicted RBP16.81■□□□□ 0.28
ABCD4-223ENST00000555904 NGLY1Q96IV0 654 aa16.81■□□□□ 0.28
ABCD4-223ENST00000555904 INSRP06213 1382 aa16.8■□□□□ 0.28
ABCD4-223ENST00000555904 FAM83GA6ND36 823 aa16.8■□□□□ 0.28
ABCD4-223ENST00000555904 PEAK1Q9H792 1746 aa16.79■□□□□ 0.28
ABCD4-223ENST00000555904 MAP2P11137 1827 aaKnown RBP16.78■□□□□ 0.28
ABCD4-223ENST00000555904 CSB-PGBD3P0DP91 1061 aa16.78■□□□□ 0.28
ABCD4-223ENST00000555904 EVA1CP58658 441 aa16.78■□□□□ 0.28
ABCD4-223ENST00000555904 HSP90AB2PQ58FF8 381 aa16.78■□□□□ 0.28
ABCD4-223ENST00000555904 BTG4Q9NY30 223 aa16.78■□□□□ 0.28
ABCD4-223ENST00000555904 DIAPH1O60610 1272 aaKnown RBP16.77■□□□□ 0.28
ABCD4-223ENST00000555904 MIER1Q8N108 512 aa16.77■□□□□ 0.28
ABCD4-223ENST00000555904 MRS2Q9HD23 443 aa16.77■□□□□ 0.28
ABCD4-223ENST00000555904 NUDCQ9Y266 331 aa16.77■□□□□ 0.28
ABCD4-223ENST00000555904 LMO7Q8WWI1 1683 aa16.77■□□□□ 0.28
ABCD4-223ENST00000555904 PLCH1Q4KWH8 1693 aa16.76■□□□□ 0.27
ABCD4-223ENST00000555904 ANKRD24Q8TF21 1146 aa16.76■□□□□ 0.27
ABCD4-223ENST00000555904 LTV1Q96GA3 475 aaPredicted RBP16.76■□□□□ 0.27
ABCD4-223ENST00000555904 STRN4Q9NRL3 753 aa16.76■□□□□ 0.27
ABCD4-223ENST00000555904 ERBB3P21860 1342 aa16.75■□□□□ 0.27
ABCD4-223ENST00000555904 COL5A2P05997 1499 aaPredicted RBP16.75■□□□□ 0.27
ABCD4-223ENST00000555904 CCER2I3L3R5 266 aa16.75■□□□□ 0.27
ABCD4-223ENST00000555904 AXIN2Q9Y2T1 843 aa16.75■□□□□ 0.27
ABCD4-223ENST00000555904 CAMTA1Q9Y6Y1 1673 aa16.75■□□□□ 0.27
ABCD4-223ENST00000555904 SLIT2O94813 1529 aa16.74■□□□□ 0.27
ABCD4-223ENST00000555904 COL18A1P39060 1754 aa16.74■□□□□ 0.27
ABCD4-223ENST00000555904 COL3A1P02461 1466 aaPredicted RBP16.73■□□□□ 0.27
ABCD4-223ENST00000555904 NWD2Q9ULI1 1742 aa16.73■□□□□ 0.27
ABCD4-223ENST00000555904 EIF4A2Q14240 407 aaKnown RBP16.73■□□□□ 0.27
ABCD4-223ENST00000555904 WDR43Q15061 677 aaKnown RBP eCLIP16.73■□□□□ 0.27
ABCD4-223ENST00000555904 FNBP4Q8N3X1 1017 aaPredicted RBP16.73■□□□□ 0.27
ABCD4-223ENST00000555904 USP21Q9UK80 565 aa16.73■□□□□ 0.27
ABCD4-223ENST00000555904 AFF2P51816 1311 aa16.72■□□□□ 0.27
ABCD4-223ENST00000555904 WDR17Q8IZU2 1322 aa16.72■□□□□ 0.27
ABCD4-223ENST00000555904 U2SURPO15042 1029 aaKnown RBP16.72■□□□□ 0.27
ABCD4-223ENST00000555904 TOM1L2Q6ZVM7 507 aa16.72■□□□□ 0.27
ABCD4-223ENST00000555904 UNC5CLQ8IV45 518 aa16.72■□□□□ 0.27
ABCD4-223ENST00000555904 NLRP2Q9NX02 1062 aa16.72■□□□□ 0.27
ABCD4-223ENST00000555904 FAM208AQ9UK61 1670 aaKnown RBP16.72■□□□□ 0.27
ABCD4-223ENST00000555904 CCDC9Q9Y3X0 531 aaKnown RBP16.71■□□□□ 0.27
ABCD4-223ENST00000555904 CRB1P82279 1406 aa16.7■□□□□ 0.26
ABCD4-223ENST00000555904 IL13P35225 146 aa16.7■□□□□ 0.26
ABCD4-223ENST00000555904 PHF23Q9BUL5 403 aaPredicted RBP16.7■□□□□ 0.26
ABCD4-223ENST00000555904 U2AF1L5P0DN76 240 aaPredicted RBP16.69■□□□□ 0.26
ABCD4-223ENST00000555904 U2AF1Q01081 240 aaKnown RBP eCLIP16.69■□□□□ 0.26
ABCD4-223ENST00000555904 ZNF772Q68DY9 489 aaPredicted RBP16.69■□□□□ 0.26
ABCD4-223ENST00000555904 LARP1Q6PKG0 1096 aaKnown RBP16.69■□□□□ 0.26
ABCD4-223ENST00000555904 NRAPQ86VF7 1730 aa16.69■□□□□ 0.26
ABCD4-223ENST00000555904 BCL9LQ86UU0 1499 aa16.68■□□□□ 0.26
ABCD4-223ENST00000555904 RGPD5Q99666 1765 aa16.68■□□□□ 0.26
ABCD4-223ENST00000555904 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.67■□□□□ 0.26
ABCD4-223ENST00000555904 CCDC184Q52MB2 194 aa16.67■□□□□ 0.26
ABCD4-223ENST00000555904 USP35Q9P2H5 1018 aa16.67■□□□□ 0.26
ABCD4-223ENST00000555904 TRPC5Q9UL62 973 aaPredicted RBP16.67■□□□□ 0.26
ABCD4-223ENST00000555904 IGSF1Q8N6C5 1336 aa16.67■□□□□ 0.26
ABCD4-223ENST00000555904 NEFMP07197 916 aa16.66■□□□□ 0.26
ABCD4-223ENST00000555904 VPS72Q15906 364 aa16.66■□□□□ 0.26
ABCD4-223ENST00000555904 NBPF6Q5VWK0 638 aa16.66■□□□□ 0.26
ABCD4-223ENST00000555904 NBPF4Q96M43 638 aa16.66■□□□□ 0.26
ABCD4-223ENST00000555904 EYA1Q99502 592 aa16.66■□□□□ 0.26
ABCD4-223ENST00000555904 CARD10Q9BWT7 1032 aa16.66■□□□□ 0.26
ABCD4-223ENST00000555904 PNNQ9H307 717 aaKnown RBP16.66■□□□□ 0.26
ABCD4-223ENST00000555904 SULT6B1Q6IMI4 303 aa16.65■□□□□ 0.26
ABCD4-223ENST00000555904 HMOX1P09601 288 aa16.64■□□□□ 0.25
ABCD4-223ENST00000555904 TCP11L2Q8N4U5 519 aa16.64■□□□□ 0.25
ABCD4-223ENST00000555904 USHBP1Q8N6Y0 703 aa16.64■□□□□ 0.25
ABCD4-223ENST00000555904 PNISRQ8TF01 805 aaKnown RBP16.64■□□□□ 0.25
ABCD4-223ENST00000555904 RAPGEF4Q8WZA2 1011 aa16.64■□□□□ 0.25
ABCD4-223ENST00000555904 THRAP3Q9Y2W1 955 aaKnown RBP16.64■□□□□ 0.25
ABCD4-223ENST00000555904 SPATA31A1Q5TZJ5 1347 aa16.64■□□□□ 0.25
ABCD4-223ENST00000555904 RGPD1P0DJD0 1748 aa16.63■□□□□ 0.25
ABCD4-223ENST00000555904 FAM9BQ8IZU0 186 aa16.63■□□□□ 0.25
ABCD4-223ENST00000555904 SPATA31A5Q5VU36 1347 aa16.63■□□□□ 0.25
ABCD4-223ENST00000555904 SPATA31A7Q8IWB4 1347 aa16.63■□□□□ 0.25
ABCD4-223ENST00000555904 ATRNO75882 1429 aa16.62■□□□□ 0.25
ABCD4-223ENST00000555904 FCHSD2O94868 740 aa16.62■□□□□ 0.25
ABCD4-223ENST00000555904 QTRT2Q9H974 415 aaKnown RBP16.62■□□□□ 0.25
ABCD4-223ENST00000555904 KDRP35968 1356 aa16.62■□□□□ 0.25
ABCD4-223ENST00000555904 GJD4Q96KN9 370 aaPredicted RBP16.61■□□□□ 0.25
ABCD4-223ENST00000555904 CDCA7Q9BWT1 371 aaPredicted RBP16.61■□□□□ 0.25
ABCD4-223ENST00000555904 MAPK8IP3Q9UPT6 1336 aa16.61■□□□□ 0.25
ABCD4-223ENST00000555904 NCAPD2Q15021 1401 aa16.61■□□□□ 0.25
ABCD4-223ENST00000555904 A0A0G2JS52 829 aa16.6■□□□□ 0.25
ABCD4-223ENST00000555904 IL2RBP14784 551 aa16.6■□□□□ 0.25
ABCD4-223ENST00000555904 TATP17735 454 aaPredicted RBP16.6■□□□□ 0.25
ABCD4-223ENST00000555904 MYT1Q01538 1121 aa16.6■□□□□ 0.25
ABCD4-223ENST00000555904 AEBP1Q8IUX7 1158 aa16.6■□□□□ 0.25
ABCD4-223ENST00000555904 ADAMTS8Q9UP79 889 aa16.6■□□□□ 0.25
ABCD4-223ENST00000555904 PRKAR2BP31323 418 aa16.59■□□□□ 0.25
ABCD4-223ENST00000555904 RSPH6AQ9H0K4 717 aa16.59■□□□□ 0.25
ABCD4-223ENST00000555904 PLEKHG2Q9H7P9 1386 aa16.59■□□□□ 0.25
ABCD4-223ENST00000555904 BARGINQ6ZT62 677 aa16.58■□□□□ 0.24
ABCD4-223ENST00000555904 RGPD2P0DJD1 1756 aa16.58■□□□□ 0.24
ABCD4-223ENST00000555904 FAM98CQ17RN3 349 aaKnown RBP16.57■□□□□ 0.24
ABCD4-223ENST00000555904 PARP4Q9UKK3 1724 aaKnown RBP16.56■□□□□ 0.24
ABCD4-223ENST00000555904 RBM6P78332 1123 aaKnown RBP16.56■□□□□ 0.24
ABCD4-223ENST00000555904 AMOTQ4VCS5 1084 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms