RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 RTL1A6NKG5 1358 aa25.07■■□□□ 1.6
PSEN1-210ENST00000554131 KIF24Q5T7B8 1368 aa25.07■■□□□ 1.6
PSEN1-210ENST00000554131 MEX3CQ5U5Q3 659 aaKnown RBP25.07■■□□□ 1.6
PSEN1-210ENST00000554131 COL5A2P05997 1499 aaPredicted RBP25.05■■□□□ 1.6
PSEN1-210ENST00000554131 IP6K1Q92551 441 aa25.05■■□□□ 1.6
PSEN1-210ENST00000554131 HOXC9P31274 260 aa25.04■■□□□ 1.6
PSEN1-210ENST00000554131 NGLY1Q96IV0 654 aa25.04■■□□□ 1.6
PSEN1-210ENST00000554131 AFF2P51816 1311 aa25.04■■□□□ 1.6
PSEN1-210ENST00000554131 FLT4P35916 1363 aa25.04■■□□□ 1.6
PSEN1-210ENST00000554131 BLMP54132 1417 aaPredicted RBP25.03■■□□□ 1.6
PSEN1-210ENST00000554131 CDK12Q9NYV4 1490 aaPredicted RBP25.03■■□□□ 1.6
PSEN1-210ENST00000554131 ZBTB7CA1YPR0 619 aa25.03■■□□□ 1.6
PSEN1-210ENST00000554131 PRKRIP1Q9H875 184 aaPredicted RBP25.03■■□□□ 1.6
PSEN1-210ENST00000554131 BTG4Q9NY30 223 aa25.03■■□□□ 1.6
PSEN1-210ENST00000554131 PPP2R1AP30153 589 aa25.02■■□□□ 1.6
PSEN1-210ENST00000554131 RALBP1Q15311 655 aa25.02■■□□□ 1.6
PSEN1-210ENST00000554131 RGS17Q9UGC6 210 aaPredicted RBP25.01■■□□□ 1.59
PSEN1-210ENST00000554131 AMPHP49418 695 aa25■■□□□ 1.59
PSEN1-210ENST00000554131 INSRP06213 1382 aa25■■□□□ 1.59
PSEN1-210ENST00000554131 COL3A1P02461 1466 aaPredicted RBP24.99■■□□□ 1.59
PSEN1-210ENST00000554131 MTHFSP49914 203 aa24.99■■□□□ 1.59
PSEN1-210ENST00000554131 HSP90AB2PQ58FF8 381 aa24.99■■□□□ 1.59
PSEN1-210ENST00000554131 UNC5CLQ8IV45 518 aa24.98■■□□□ 1.59
PSEN1-210ENST00000554131 USP21Q9UK80 565 aa24.98■■□□□ 1.59
PSEN1-210ENST00000554131 ATRNO75882 1429 aa24.97■■□□□ 1.59
PSEN1-210ENST00000554131 ERBB3P21860 1342 aa24.97■■□□□ 1.59
PSEN1-210ENST00000554131 FAM208AQ9UK61 1670 aaKnown RBP24.97■■□□□ 1.59
PSEN1-210ENST00000554131 RGPD2P0DJD1 1756 aa24.96■■□□□ 1.59
PSEN1-210ENST00000554131 PPM1GO15355 546 aaPredicted RBP24.95■■□□□ 1.58
PSEN1-210ENST00000554131 MYBBP1AQ9BQG0 1328 aaKnown RBP24.94■■□□□ 1.58
PSEN1-210ENST00000554131 ANKRD24Q8TF21 1146 aa24.94■■□□□ 1.58
PSEN1-210ENST00000554131 WDR17Q8IZU2 1322 aa24.93■■□□□ 1.58
PSEN1-210ENST00000554131 LARP1Q6PKG0 1096 aaKnown RBP24.93■■□□□ 1.58
PSEN1-210ENST00000554131 GLI3P10071 1580 aa24.93■■□□□ 1.58
PSEN1-210ENST00000554131 RGPD1P0DJD0 1748 aa24.92■■□□□ 1.58
PSEN1-210ENST00000554131 VPS72Q15906 364 aa24.92■■□□□ 1.58
PSEN1-210ENST00000554131 STRN4Q9NRL3 753 aa24.92■■□□□ 1.58
PSEN1-210ENST00000554131 ZNF772Q68DY9 489 aaPredicted RBP24.91■■□□□ 1.58
PSEN1-210ENST00000554131 CRB1P82279 1406 aa24.91■■□□□ 1.58
PSEN1-210ENST00000554131 EIF4A2Q14240 407 aaKnown RBP24.9■■□□□ 1.58
PSEN1-210ENST00000554131 NCAPD2Q15021 1401 aa24.89■■□□□ 1.58
PSEN1-210ENST00000554131 ANP32CO43423 234 aa24.89■■□□□ 1.58
PSEN1-210ENST00000554131 SPATA31A5Q5VU36 1347 aa24.88■■□□□ 1.57
PSEN1-210ENST00000554131 SPATA31A7Q8IWB4 1347 aa24.88■■□□□ 1.57
PSEN1-210ENST00000554131 EVA1CP58658 441 aa24.88■■□□□ 1.57
PSEN1-210ENST00000554131 DIEXFQ68CQ4 756 aaKnown RBP24.88■■□□□ 1.57
PSEN1-210ENST00000554131 LTV1Q96GA3 475 aaPredicted RBP24.88■■□□□ 1.57
PSEN1-210ENST00000554131 TRPC5Q9UL62 973 aaPredicted RBP24.88■■□□□ 1.57
PSEN1-210ENST00000554131 WNK3Q9BYP7 1800 aa24.88■■□□□ 1.57
PSEN1-210ENST00000554131 SPATA31A1Q5TZJ5 1347 aa24.87■■□□□ 1.57
PSEN1-210ENST00000554131 IL13P35225 146 aa24.87■■□□□ 1.57
PSEN1-210ENST00000554131 POTEAQ6S8J7 498 aa24.87■■□□□ 1.57
PSEN1-210ENST00000554131 QTRT2Q9H974 415 aaKnown RBP24.87■■□□□ 1.57
PSEN1-210ENST00000554131 PHF23Q9BUL5 403 aaPredicted RBP24.86■■□□□ 1.57
PSEN1-210ENST00000554131 NBPF6Q5VWK0 638 aa24.85■■□□□ 1.57
PSEN1-210ENST00000554131 NBPF4Q96M43 638 aa24.85■■□□□ 1.57
PSEN1-210ENST00000554131 CARD10Q9BWT7 1032 aa24.85■■□□□ 1.57
PSEN1-210ENST00000554131 GJD4Q96KN9 370 aaPredicted RBP24.84■■□□□ 1.57
PSEN1-210ENST00000554131 CSB-PGBD3P0DP91 1061 aa24.83■■□□□ 1.57
PSEN1-210ENST00000554131 TOM1L2Q6ZVM7 507 aa24.83■■□□□ 1.57
PSEN1-210ENST00000554131 EYA1Q99502 592 aa24.83■■□□□ 1.57
PSEN1-210ENST00000554131 THSD7AQ9UPZ6 1657 aa24.82■■□□□ 1.56
PSEN1-210ENST00000554131 IGSF1Q8N6C5 1336 aa24.82■■□□□ 1.56
PSEN1-210ENST00000554131 DISP2A7MBM2 1401 aa24.81■■□□□ 1.56
PSEN1-210ENST00000554131 DIAPH1O60610 1272 aaKnown RBP24.81■■□□□ 1.56
PSEN1-210ENST00000554131 CCDC184Q52MB2 194 aa24.81■■□□□ 1.56
PSEN1-210ENST00000554131 NLRP2Q9NX02 1062 aa24.81■■□□□ 1.56
PSEN1-210ENST00000554131 CFAP53Q96M91 514 aa24.8■■□□□ 1.56
PSEN1-210ENST00000554131 BARGINQ6ZT62 677 aa24.78■■□□□ 1.56
PSEN1-210ENST00000554131 TCP11L2Q8N4U5 519 aa24.78■■□□□ 1.56
PSEN1-210ENST00000554131 USHBP1Q8N6Y0 703 aa24.78■■□□□ 1.56
PSEN1-210ENST00000554131 THRAP3Q9Y2W1 955 aaKnown RBP24.78■■□□□ 1.56
PSEN1-210ENST00000554131 CCDC9Q9Y3X0 531 aaKnown RBP24.78■■□□□ 1.56
PSEN1-210ENST00000554131 ONECUT3O60422 494 aaPredicted RBP24.77■■□□□ 1.56
PSEN1-210ENST00000554131 RBM6P78332 1123 aaKnown RBP24.77■■□□□ 1.56
PSEN1-210ENST00000554131 USP35Q9P2H5 1018 aa24.77■■□□□ 1.56
PSEN1-210ENST00000554131 PARP4Q9UKK3 1724 aaKnown RBP24.77■■□□□ 1.56
PSEN1-210ENST00000554131 KDRP35968 1356 aa24.77■■□□□ 1.56
PSEN1-210ENST00000554131 MEGF6O75095 1541 aa24.76■■□□□ 1.55
PSEN1-210ENST00000554131 LRRC37A3O60309 1634 aa24.75■■□□□ 1.55
PSEN1-210ENST00000554131 RXRBP28702 533 aa24.73■■□□□ 1.55
PSEN1-210ENST00000554131 FAM98CQ17RN3 349 aaKnown RBP24.73■■□□□ 1.55
PSEN1-210ENST00000554131 AEBP1Q8IUX7 1158 aa24.73■■□□□ 1.55
PSEN1-210ENST00000554131 SHANK3Q9BYB0 1731 aa24.72■■□□□ 1.55
PSEN1-210ENST00000554131 RGS12O14924 1447 aa24.72■■□□□ 1.55
PSEN1-210ENST00000554131 PKD1L3Q7Z443 1732 aa24.71■■□□□ 1.55
PSEN1-210ENST00000554131 BRWD3Q6RI45 1802 aa24.7■■□□□ 1.55
PSEN1-210ENST00000554131 MIER1Q8N108 512 aa24.7■■□□□ 1.54
PSEN1-210ENST00000554131 OVOS2A0A0G2JMS6 1433 aa24.69■■□□□ 1.54
PSEN1-210ENST00000554131 U2SURPO15042 1029 aaKnown RBP24.69■■□□□ 1.54
PSEN1-210ENST00000554131 SULT6B1Q6IMI4 303 aa24.69■■□□□ 1.54
PSEN1-210ENST00000554131 IL2RBP14784 551 aa24.68■■□□□ 1.54
PSEN1-210ENST00000554131 NUDCQ9Y266 331 aa24.68■■□□□ 1.54
PSEN1-210ENST00000554131 HMOX1P09601 288 aa24.67■■□□□ 1.54
PSEN1-210ENST00000554131 CDCA7Q9BWT1 371 aaPredicted RBP24.67■■□□□ 1.54
PSEN1-210ENST00000554131 PLEKHG2Q9H7P9 1386 aa24.67■■□□□ 1.54
PSEN1-210ENST00000554131 SEPT12Q8IYM1 358 aa24.66■■□□□ 1.54
PSEN1-210ENST00000554131 RSPH6AQ9H0K4 717 aa24.66■■□□□ 1.54
PSEN1-210ENST00000554131 TNS2Q63HR2 1409 aa24.66■■□□□ 1.54
PSEN1-210ENST00000554131 MRS2Q9HD23 443 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms