RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 COL18A1P39060 1754 aa26.09■■□□□ 1.77
PSEN1-207ENST00000553599 HOXC9P31274 260 aa26.08■■□□□ 1.77
PSEN1-207ENST00000553599 LMO7Q8WWI1 1683 aa26.08■■□□□ 1.77
PSEN1-207ENST00000553599 INSRP06213 1382 aa26.07■■□□□ 1.76
PSEN1-207ENST00000553599 ZBTB7CA1YPR0 619 aa26.07■■□□□ 1.76
PSEN1-207ENST00000553599 PEAK1Q9H792 1746 aa26.06■■□□□ 1.76
PSEN1-207ENST00000553599 PPM1GO15355 546 aaPredicted RBP26.06■■□□□ 1.76
PSEN1-207ENST00000553599 CHRNA2Q15822 529 aa26.06■■□□□ 1.76
PSEN1-207ENST00000553599 CFAP53Q96M91 514 aa26.06■■□□□ 1.76
PSEN1-207ENST00000553599 NGLY1Q96IV0 654 aa26.05■■□□□ 1.76
PSEN1-207ENST00000553599 NWD2Q9ULI1 1742 aa26.05■■□□□ 1.76
PSEN1-207ENST00000553599 SLIT2O94813 1529 aa26.04■■□□□ 1.76
PSEN1-207ENST00000553599 C8orf37Q96NL8 207 aa26.04■■□□□ 1.76
PSEN1-207ENST00000553599 PLCH1Q4KWH8 1693 aa26.03■■□□□ 1.76
PSEN1-207ENST00000553599 FNBP4Q8N3X1 1017 aaPredicted RBP26.03■■□□□ 1.76
PSEN1-207ENST00000553599 CAMTA1Q9Y6Y1 1673 aa26.03■■□□□ 1.76
PSEN1-207ENST00000553599 BTG4Q9NY30 223 aa26.02■■□□□ 1.76
PSEN1-207ENST00000553599 AXIN2Q9Y2T1 843 aa26.02■■□□□ 1.76
PSEN1-207ENST00000553599 HSP90AB2PQ58FF8 381 aa26.01■■□□□ 1.75
PSEN1-207ENST00000553599 COL5A2P05997 1499 aaPredicted RBP25.99■■□□□ 1.75
PSEN1-207ENST00000553599 ERBB3P21860 1342 aa25.98■■□□□ 1.75
PSEN1-207ENST00000553599 RGPD5Q99666 1765 aa25.97■■□□□ 1.75
PSEN1-207ENST00000553599 EVA1CP58658 441 aa25.97■■□□□ 1.75
PSEN1-207ENST00000553599 UNC5CLQ8IV45 518 aa25.97■■□□□ 1.75
PSEN1-207ENST00000553599 ANKRD24Q8TF21 1146 aa25.97■■□□□ 1.75
PSEN1-207ENST00000553599 COL3A1P02461 1466 aaPredicted RBP25.97■■□□□ 1.75
PSEN1-207ENST00000553599 NRAPQ86VF7 1730 aa25.97■■□□□ 1.75
PSEN1-207ENST00000553599 FAM208AQ9UK61 1670 aaKnown RBP25.96■■□□□ 1.75
PSEN1-207ENST00000553599 WDR17Q8IZU2 1322 aa25.96■■□□□ 1.75
PSEN1-207ENST00000553599 DIAPH1O60610 1272 aaKnown RBP25.96■■□□□ 1.75
PSEN1-207ENST00000553599 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.96■■□□□ 1.75
PSEN1-207ENST00000553599 BCL9LQ86UU0 1499 aa25.96■■□□□ 1.75
PSEN1-207ENST00000553599 AFF2P51816 1311 aa25.95■■□□□ 1.75
PSEN1-207ENST00000553599 CCER2I3L3R5 266 aa25.94■■□□□ 1.74
PSEN1-207ENST00000553599 EIF4A2Q14240 407 aaKnown RBP25.94■■□□□ 1.74
PSEN1-207ENST00000553599 USP21Q9UK80 565 aa25.94■■□□□ 1.74
PSEN1-207ENST00000553599 NUDCQ9Y266 331 aa25.93■■□□□ 1.74
PSEN1-207ENST00000553599 CSB-PGBD3P0DP91 1061 aa25.92■■□□□ 1.74
PSEN1-207ENST00000553599 IL13P35225 146 aa25.92■■□□□ 1.74
PSEN1-207ENST00000553599 ZNF772Q68DY9 489 aaPredicted RBP25.91■■□□□ 1.74
PSEN1-207ENST00000553599 LTV1Q96GA3 475 aaPredicted RBP25.91■■□□□ 1.74
PSEN1-207ENST00000553599 STRN4Q9NRL3 753 aa25.91■■□□□ 1.74
PSEN1-207ENST00000553599 CRB1P82279 1406 aa25.9■■□□□ 1.74
PSEN1-207ENST00000553599 MIER1Q8N108 512 aa25.9■■□□□ 1.74
PSEN1-207ENST00000553599 VPS72Q15906 364 aa25.89■■□□□ 1.74
PSEN1-207ENST00000553599 LARP1Q6PKG0 1096 aaKnown RBP25.88■■□□□ 1.73
PSEN1-207ENST00000553599 TOM1L2Q6ZVM7 507 aa25.88■■□□□ 1.73
PSEN1-207ENST00000553599 CARD10Q9BWT7 1032 aa25.88■■□□□ 1.73
PSEN1-207ENST00000553599 MRS2Q9HD23 443 aa25.88■■□□□ 1.73
PSEN1-207ENST00000553599 NLRP2Q9NX02 1062 aa25.87■■□□□ 1.73
PSEN1-207ENST00000553599 TRPC5Q9UL62 973 aaPredicted RBP25.87■■□□□ 1.73
PSEN1-207ENST00000553599 ATRNO75882 1429 aa25.86■■□□□ 1.73
PSEN1-207ENST00000553599 NCAPD2Q15021 1401 aa25.86■■□□□ 1.73
PSEN1-207ENST00000553599 IGSF1Q8N6C5 1336 aa25.86■■□□□ 1.73
PSEN1-207ENST00000553599 RGPD1P0DJD0 1748 aa25.85■■□□□ 1.73
PSEN1-207ENST00000553599 EYA1Q99502 592 aa25.85■■□□□ 1.73
PSEN1-207ENST00000553599 SPATA31A5Q5VU36 1347 aa25.85■■□□□ 1.73
PSEN1-207ENST00000553599 SPATA31A7Q8IWB4 1347 aa25.85■■□□□ 1.73
PSEN1-207ENST00000553599 NBPF6Q5VWK0 638 aa25.84■■□□□ 1.73
PSEN1-207ENST00000553599 NBPF4Q96M43 638 aa25.84■■□□□ 1.73
PSEN1-207ENST00000553599 PHF23Q9BUL5 403 aaPredicted RBP25.84■■□□□ 1.73
PSEN1-207ENST00000553599 THRAP3Q9Y2W1 955 aaKnown RBP25.84■■□□□ 1.73
PSEN1-207ENST00000553599 SPATA31A1Q5TZJ5 1347 aa25.83■■□□□ 1.73
PSEN1-207ENST00000553599 U2SURPO15042 1029 aaKnown RBP25.82■■□□□ 1.72
PSEN1-207ENST00000553599 CCDC184Q52MB2 194 aa25.82■■□□□ 1.72
PSEN1-207ENST00000553599 WDR43Q15061 677 aaKnown RBP eCLIP25.81■■□□□ 1.72
PSEN1-207ENST00000553599 QTRT2Q9H974 415 aaKnown RBP25.81■■□□□ 1.72
PSEN1-207ENST00000553599 CCDC9Q9Y3X0 531 aaKnown RBP25.81■■□□□ 1.72
PSEN1-207ENST00000553599 KDRP35968 1356 aa25.81■■□□□ 1.72
PSEN1-207ENST00000553599 PLEKHG2Q9H7P9 1386 aa25.81■■□□□ 1.72
PSEN1-207ENST00000553599 TCP11L2Q8N4U5 519 aa25.8■■□□□ 1.72
PSEN1-207ENST00000553599 RGPD2P0DJD1 1756 aa25.79■■□□□ 1.72
PSEN1-207ENST00000553599 U2AF1L5P0DN76 240 aaPredicted RBP25.79■■□□□ 1.72
PSEN1-207ENST00000553599 U2AF1Q01081 240 aaKnown RBP eCLIP25.79■■□□□ 1.72
PSEN1-207ENST00000553599 GJD4Q96KN9 370 aaPredicted RBP25.79■■□□□ 1.72
PSEN1-207ENST00000553599 BARGINQ6ZT62 677 aa25.78■■□□□ 1.72
PSEN1-207ENST00000553599 PNISRQ8TF01 805 aaKnown RBP25.78■■□□□ 1.72
PSEN1-207ENST00000553599 CDCA7Q9BWT1 371 aaPredicted RBP25.78■■□□□ 1.72
PSEN1-207ENST00000553599 FCHSD2O94868 740 aa25.77■■□□□ 1.72
PSEN1-207ENST00000553599 SULT6B1Q6IMI4 303 aa25.77■■□□□ 1.72
PSEN1-207ENST00000553599 PNNQ9H307 717 aaKnown RBP25.77■■□□□ 1.72
PSEN1-207ENST00000553599 USP35Q9P2H5 1018 aa25.75■■□□□ 1.71
PSEN1-207ENST00000553599 RGS17Q9UGC6 210 aaPredicted RBP25.75■■□□□ 1.71
PSEN1-207ENST00000553599 RBM6P78332 1123 aaKnown RBP25.74■■□□□ 1.71
PSEN1-207ENST00000553599 USHBP1Q8N6Y0 703 aa25.74■■□□□ 1.71
PSEN1-207ENST00000553599 RAPGEF4Q8WZA2 1011 aa25.74■■□□□ 1.71
PSEN1-207ENST00000553599 IL2RBP14784 551 aa25.73■■□□□ 1.71
PSEN1-207ENST00000553599 GLI3P10071 1580 aa25.73■■□□□ 1.71
PSEN1-207ENST00000553599 DISP2A7MBM2 1401 aa25.71■■□□□ 1.71
PSEN1-207ENST00000553599 ONECUT3O60422 494 aaPredicted RBP25.71■■□□□ 1.71
PSEN1-207ENST00000553599 HMOX1P09601 288 aa25.71■■□□□ 1.71
PSEN1-207ENST00000553599 TATP17735 454 aaPredicted RBP25.71■■□□□ 1.71
PSEN1-207ENST00000553599 AEBP1Q8IUX7 1158 aa25.71■■□□□ 1.71
PSEN1-207ENST00000553599 RSPH6AQ9H0K4 717 aa25.71■■□□□ 1.71
PSEN1-207ENST00000553599 ADAMTS8Q9UP79 889 aa25.71■■□□□ 1.71
PSEN1-207ENST00000553599 WNK3Q9BYP7 1800 aa25.71■■□□□ 1.71
PSEN1-207ENST00000553599 PARP4Q9UKK3 1724 aaKnown RBP25.71■■□□□ 1.71
PSEN1-207ENST00000553599 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.69■■□□□ 1.76e-6■□□□□ 8.9
PSEN1-207ENST00000553599 NEFMP07197 916 aa25.68■■□□□ 1.7
PSEN1-207ENST00000553599 RXRBP28702 533 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms