RNA–Protein interactions for RNA: ENST00000553343.5

SDR39U1-204, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-204ENST00000553343 AMPHP49418 695 aa27.73■■■□□ 2.03
SDR39U1-204ENST00000553343 INSRP06213 1382 aa27.73■■■□□ 2.03
SDR39U1-204ENST00000553343 NRAPQ86VF7 1730 aa27.72■■■□□ 2.03
SDR39U1-204ENST00000553343 RRS1Q15050 365 aaKnown RBP27.72■■■□□ 2.03
SDR39U1-204ENST00000553343 PPP2R1AP30153 589 aa27.71■■■□□ 2.03
SDR39U1-204ENST00000553343 HOXC9P31274 260 aa27.71■■■□□ 2.03
SDR39U1-204ENST00000553343 TNNT2P45379 298 aaPredicted RBP27.71■■■□□ 2.03
SDR39U1-204ENST00000553343 NGLY1Q96IV0 654 aa27.7■■■□□ 2.02
SDR39U1-204ENST00000553343 C8orf37Q96NL8 207 aa27.7■■■□□ 2.02
SDR39U1-204ENST00000553343 CAMTA1Q9Y6Y1 1673 aa27.7■■■□□ 2.02
SDR39U1-204ENST00000553343 COL5A2P05997 1499 aaPredicted RBP27.7■■■□□ 2.02
SDR39U1-204ENST00000553343 EMILIN1Q9Y6C2 1016 aa27.69■■■□□ 2.02
SDR39U1-204ENST00000553343 DIEXFQ68CQ4 756 aaKnown RBP27.68■■■□□ 2.02
SDR39U1-204ENST00000553343 MTHFSP49914 203 aa27.67■■■□□ 2.02
SDR39U1-204ENST00000553343 CHRNA2Q15822 529 aa27.67■■■□□ 2.02
SDR39U1-204ENST00000553343 FBLN1P23142 703 aa27.66■■■□□ 2.02
SDR39U1-204ENST00000553343 BTG4Q9NY30 223 aa27.66■■■□□ 2.02
SDR39U1-204ENST00000553343 ERBB3P21860 1342 aa27.66■■■□□ 2.02
SDR39U1-204ENST00000553343 RGPD5Q99666 1765 aa27.65■■■□□ 2.02
SDR39U1-204ENST00000553343 BCL9LQ86UU0 1499 aa27.65■■■□□ 2.02
SDR39U1-204ENST00000553343 CFAP53Q96M91 514 aa27.65■■■□□ 2.02
SDR39U1-204ENST00000553343 CNGB1Q14028 1251 aaPredicted RBP27.64■■■□□ 2.02
SDR39U1-204ENST00000553343 UNC5CLQ8IV45 518 aa27.64■■■□□ 2.02
SDR39U1-204ENST00000553343 ZBTB7CA1YPR0 619 aa27.63■■■□□ 2.01
SDR39U1-204ENST00000553343 ZNF772Q68DY9 489 aaPredicted RBP27.63■■■□□ 2.01
SDR39U1-204ENST00000553343 AXIN2Q9Y2T1 843 aa27.63■■■□□ 2.01
SDR39U1-204ENST00000553343 AFF2P51816 1311 aa27.63■■■□□ 2.01
SDR39U1-204ENST00000553343 WDR17Q8IZU2 1322 aa27.63■■■□□ 2.01
SDR39U1-204ENST00000553343 USP21Q9UK80 565 aa27.62■■■□□ 2.01
SDR39U1-204ENST00000553343 PPM1GO15355 546 aaPredicted RBP27.61■■■□□ 2.01
SDR39U1-204ENST00000553343 COL3A1P02461 1466 aaPredicted RBP27.61■■■□□ 2.01
SDR39U1-204ENST00000553343 CRB1P82279 1406 aa27.6■■■□□ 2.01
SDR39U1-204ENST00000553343 HSP90AB2PQ58FF8 381 aa27.6■■■□□ 2.01
SDR39U1-204ENST00000553343 EVA1CP58658 441 aa27.59■■■□□ 2.01
SDR39U1-204ENST00000553343 ANKRD24Q8TF21 1146 aa27.59■■■□□ 2.01
SDR39U1-204ENST00000553343 VPS72Q15906 364 aa27.58■■■□□ 2.01
SDR39U1-204ENST00000553343 ATRNO75882 1429 aa27.58■■■□□ 2
SDR39U1-204ENST00000553343 TRPC5Q9UL62 973 aaPredicted RBP27.57■■■□□ 2
SDR39U1-204ENST00000553343 PLEKHG2Q9H7P9 1386 aa27.56■■■□□ 2
SDR39U1-204ENST00000553343 NCAPD2Q15021 1401 aa27.56■■■□□ 2
SDR39U1-204ENST00000553343 DIAPH1O60610 1272 aaKnown RBP27.54■■■□□ 2
SDR39U1-204ENST00000553343 RGPD1P0DJD0 1748 aa27.54■■■□□ 2
SDR39U1-204ENST00000553343 THRAP3Q9Y2W1 955 aaKnown RBP27.54■■■□□ 2
SDR39U1-204ENST00000553343 CSB-PGBD3P0DP91 1061 aa27.53■■■□□ 2
SDR39U1-204ENST00000553343 EIF4A2Q14240 407 aaKnown RBP27.53■■■□□ 2
SDR39U1-204ENST00000553343 PHF23Q9BUL5 403 aaPredicted RBP27.53■■■□□ 2
SDR39U1-204ENST00000553343 CARD10Q9BWT7 1032 aa27.53■■■□□ 2
SDR39U1-204ENST00000553343 IL13P35225 146 aa27.52■■■□□ 2
SDR39U1-204ENST00000553343 STRN4Q9NRL3 753 aa27.52■■■□□ 2
SDR39U1-204ENST00000553343 NUDCQ9Y266 331 aa27.52■■■□□ 2
SDR39U1-204ENST00000553343 SPATA31A5Q5VU36 1347 aa27.51■■□□□ 1.99
SDR39U1-204ENST00000553343 SPATA31A7Q8IWB4 1347 aa27.51■■□□□ 1.99
SDR39U1-204ENST00000553343 TOM1L2Q6ZVM7 507 aa27.51■■□□□ 1.99
SDR39U1-204ENST00000553343 IGSF1Q8N6C5 1336 aa27.5■■□□□ 1.99
SDR39U1-204ENST00000553343 LARP1Q6PKG0 1096 aaKnown RBP27.5■■□□□ 1.99
SDR39U1-204ENST00000553343 SPATA31A1Q5TZJ5 1347 aa27.49■■□□□ 1.99
SDR39U1-204ENST00000553343 CCER2I3L3R5 266 aa27.48■■□□□ 1.99
SDR39U1-204ENST00000553343 WNK3Q9BYP7 1800 aa27.48■■□□□ 1.99
SDR39U1-204ENST00000553343 KDRP35968 1356 aa27.47■■□□□ 1.99
SDR39U1-204ENST00000553343 BARGINQ6ZT62 677 aa27.46■■□□□ 1.99
SDR39U1-204ENST00000553343 LTV1Q96GA3 475 aaPredicted RBP27.46■■□□□ 1.99
SDR39U1-204ENST00000553343 GJD4Q96KN9 370 aaPredicted RBP27.46■■□□□ 1.99
SDR39U1-204ENST00000553343 CDCA7Q9BWT1 371 aaPredicted RBP27.46■■□□□ 1.99
SDR39U1-204ENST00000553343 QTRT2Q9H974 415 aaKnown RBP27.46■■□□□ 1.99
SDR39U1-204ENST00000553343 NLRP2Q9NX02 1062 aa27.46■■□□□ 1.99
SDR39U1-204ENST00000553343 RGPD2P0DJD1 1756 aa27.45■■□□□ 1.99
SDR39U1-204ENST00000553343 GLI3P10071 1580 aa27.45■■□□□ 1.99
SDR39U1-204ENST00000553343 TCP11L2Q8N4U5 519 aa27.45■■□□□ 1.98
SDR39U1-204ENST00000553343 EYA1Q99502 592 aa27.44■■□□□ 1.98
SDR39U1-204ENST00000553343 NBPF6Q5VWK0 638 aa27.43■■□□□ 1.98
SDR39U1-204ENST00000553343 NBPF4Q96M43 638 aa27.43■■□□□ 1.98
SDR39U1-204ENST00000553343 PARP4Q9UKK3 1724 aaKnown RBP27.43■■□□□ 1.98
SDR39U1-204ENST00000553343 RBM6P78332 1123 aaKnown RBP27.42■■□□□ 1.98
SDR39U1-204ENST00000553343 RGS17Q9UGC6 210 aaPredicted RBP27.42■■□□□ 1.98
SDR39U1-204ENST00000553343 CCDC9Q9Y3X0 531 aaKnown RBP27.42■■□□□ 1.98
SDR39U1-204ENST00000553343 DISP2A7MBM2 1401 aa27.41■■□□□ 1.98
SDR39U1-204ENST00000553343 THSD7AQ9UPZ6 1657 aa27.4■■□□□ 1.98
SDR39U1-204ENST00000553343 ONECUT3O60422 494 aaPredicted RBP27.39■■□□□ 1.98
SDR39U1-204ENST00000553343 MRS2Q9HD23 443 aa27.39■■□□□ 1.98
SDR39U1-204ENST00000553343 PNNQ9H307 717 aaKnown RBP27.38■■□□□ 1.97
SDR39U1-204ENST00000553343 U2SURPO15042 1029 aaKnown RBP27.36■■□□□ 1.97
SDR39U1-204ENST00000553343 FCHSD2O94868 740 aa27.36■■□□□ 1.97
SDR39U1-204ENST00000553343 IL2RBP14784 551 aa27.36■■□□□ 1.97
SDR39U1-204ENST00000553343 RXRBP28702 533 aa27.36■■□□□ 1.97
SDR39U1-204ENST00000553343 WDR43Q15061 677 aaKnown RBP eCLIP27.35■■□□□ 1.97
SDR39U1-204ENST00000553343 RAPGEF4Q8WZA2 1011 aa27.35■■□□□ 1.97
SDR39U1-204ENST00000553343 OVOS2A0A0G2JMS6 1433 aa27.34■■□□□ 1.97
SDR39U1-204ENST00000553343 U2AF1L5P0DN76 240 aaPredicted RBP27.34■■□□□ 1.97
SDR39U1-204ENST00000553343 U2AF1Q01081 240 aaKnown RBP eCLIP27.34■■□□□ 1.976e-10■■■■□ 25.3
SDR39U1-204ENST00000553343 SULT6B1Q6IMI4 303 aa27.34■■□□□ 1.97
SDR39U1-204ENST00000553343 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.34■■□□□ 1.97
SDR39U1-204ENST00000553343 PKD1L3Q7Z443 1732 aa27.33■■□□□ 1.97
SDR39U1-204ENST00000553343 USP35Q9P2H5 1018 aa27.33■■□□□ 1.97
SDR39U1-204ENST00000553343 TATP17735 454 aaPredicted RBP27.32■■□□□ 1.96
SDR39U1-204ENST00000553343 MIER1Q8N108 512 aa27.32■■□□□ 1.96
SDR39U1-204ENST00000553343 MEGF6O75095 1541 aa27.31■■□□□ 1.96
SDR39U1-204ENST00000553343 LRRC37A3O60309 1634 aa27.31■■□□□ 1.96
SDR39U1-204ENST00000553343 POTEAQ6S8J7 498 aa27.31■■□□□ 1.96
SDR39U1-204ENST00000553343 PNISRQ8TF01 805 aaKnown RBP27.31■■□□□ 1.96
SDR39U1-204ENST00000553343 TNS2Q63HR2 1409 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms