RNA–Protein interactions for RNA: ENST00000549128.5

CHPT1-204, Transcript of choline phosphotransferase 1, humanhuman

TSL 5

Gene CHPT1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-204ENST00000549128 HOXC9P31274 260 aa35.75■■■■□ 3.31
CHPT1-204ENST00000549128 IP6K1Q92551 441 aa35.74■■■■□ 3.31
CHPT1-204ENST00000549128 PRKRIP1Q9H875 184 aaPredicted RBP35.73■■■■□ 3.31
CHPT1-204ENST00000549128 PPP2R1AP30153 589 aa35.72■■■■□ 3.31
CHPT1-204ENST00000549128 BCL9LQ86UU0 1499 aa35.72■■■■□ 3.31
CHPT1-204ENST00000549128 HSP90AB2PQ58FF8 381 aa35.72■■■■□ 3.31
CHPT1-204ENST00000549128 RGPD5Q99666 1765 aa35.72■■■■□ 3.31
CHPT1-204ENST00000549128 MTHFSP49914 203 aa35.71■■■■□ 3.31
CHPT1-204ENST00000549128 RALBP1Q15311 655 aa35.71■■■■□ 3.31
CHPT1-204ENST00000549128 USP21Q9UK80 565 aa35.71■■■■□ 3.31
CHPT1-204ENST00000549128 SMG6Q86US8 1419 aaKnown RBP35.69■■■■□ 3.3
CHPT1-204ENST00000549128 FLT4P35916 1363 aa35.69■■■■□ 3.3
CHPT1-204ENST00000549128 RTL1A6NKG5 1358 aa35.68■■■■□ 3.3
CHPT1-204ENST00000549128 RGS17Q9UGC6 210 aaPredicted RBP35.68■■■■□ 3.3
CHPT1-204ENST00000549128 UNC5CLQ8IV45 518 aa35.67■■■■□ 3.3
CHPT1-204ENST00000549128 STRN4Q9NRL3 753 aa35.67■■■■□ 3.3
CHPT1-204ENST00000549128 KIF24Q5T7B8 1368 aa35.66■■■■□ 3.3
CHPT1-204ENST00000549128 ABCC6O95255 1503 aa35.66■■■■□ 3.3
CHPT1-204ENST00000549128 COL5A2P05997 1499 aaPredicted RBP35.66■■■■□ 3.3
CHPT1-204ENST00000549128 NRAPQ86VF7 1730 aa35.66■■■■□ 3.3
CHPT1-204ENST00000549128 NWD2Q9ULI1 1742 aa35.66■■■■□ 3.3
CHPT1-204ENST00000549128 LTV1Q96GA3 475 aaPredicted RBP35.64■■■■□ 3.3
CHPT1-204ENST00000549128 BLMP54132 1417 aaPredicted RBP35.64■■■■□ 3.3
CHPT1-204ENST00000549128 EVA1CP58658 441 aa35.63■■■■□ 3.29
CHPT1-204ENST00000549128 ANKRD24Q8TF21 1146 aa35.63■■■■□ 3.29
CHPT1-204ENST00000549128 INSRP06213 1382 aa35.63■■■■□ 3.29
CHPT1-204ENST00000549128 LARP1Q6PKG0 1096 aaKnown RBP35.62■■■■□ 3.29
CHPT1-204ENST00000549128 PHF23Q9BUL5 403 aaPredicted RBP35.62■■■■□ 3.29
CHPT1-204ENST00000549128 ANP32CO43423 234 aa35.61■■■■□ 3.29
CHPT1-204ENST00000549128 ERBB3P21860 1342 aa35.61■■■■□ 3.29
CHPT1-204ENST00000549128 DIEXFQ68CQ4 756 aaKnown RBP35.6■■■■□ 3.29
CHPT1-204ENST00000549128 CDK12Q9NYV4 1490 aaPredicted RBP35.6■■■■□ 3.29
CHPT1-204ENST00000549128 MYBBP1AQ9BQG0 1328 aaKnown RBP35.58■■■■□ 3.29
CHPT1-204ENST00000549128 ZNF772Q68DY9 489 aaPredicted RBP35.57■■■■□ 3.28
CHPT1-204ENST00000549128 WDR17Q8IZU2 1322 aa35.57■■■■□ 3.28
CHPT1-204ENST00000549128 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.57■■■■□ 3.28
CHPT1-204ENST00000549128 CSB-PGBD3P0DP91 1061 aa35.56■■■■□ 3.28
CHPT1-204ENST00000549128 QTRT2Q9H974 415 aaKnown RBP35.55■■■■□ 3.28
CHPT1-204ENST00000549128 EIF4A2Q14240 407 aaKnown RBP35.55■■■■□ 3.28
CHPT1-204ENST00000549128 VPS72Q15906 364 aa35.55■■■■□ 3.28
CHPT1-204ENST00000549128 ATRNO75882 1429 aa35.53■■■■□ 3.28
CHPT1-204ENST00000549128 TOM1L2Q6ZVM7 507 aa35.53■■■■□ 3.28
CHPT1-204ENST00000549128 TRPC5Q9UL62 973 aaPredicted RBP35.53■■■■□ 3.28
CHPT1-204ENST00000549128 POTEAQ6S8J7 498 aa35.52■■■■□ 3.28
CHPT1-204ENST00000549128 CCDC9Q9Y3X0 531 aaKnown RBP35.52■■■■□ 3.28
CHPT1-204ENST00000549128 COL3A1P02461 1466 aaPredicted RBP35.51■■■■□ 3.27
CHPT1-204ENST00000549128 USP35Q9P2H5 1018 aa35.51■■■■□ 3.27
CHPT1-204ENST00000549128 NLRP2Q9NX02 1062 aa35.5■■■■□ 3.27
CHPT1-204ENST00000549128 CRB1P82279 1406 aa35.49■■■■□ 3.27
CHPT1-204ENST00000549128 SPATA31A5Q5VU36 1347 aa35.49■■■■□ 3.27
CHPT1-204ENST00000549128 SPATA31A7Q8IWB4 1347 aa35.49■■■■□ 3.27
CHPT1-204ENST00000549128 IL13P35225 146 aa35.49■■■■□ 3.27
CHPT1-204ENST00000549128 NBPF6Q5VWK0 638 aa35.49■■■■□ 3.27
CHPT1-204ENST00000549128 NBPF4Q96M43 638 aa35.49■■■■□ 3.27
CHPT1-204ENST00000549128 RGPD2P0DJD1 1756 aa35.48■■■■□ 3.27
CHPT1-204ENST00000549128 SPATA31A1Q5TZJ5 1347 aa35.47■■■■□ 3.27
CHPT1-204ENST00000549128 GJD4Q96KN9 370 aaPredicted RBP35.47■■■■□ 3.27
CHPT1-204ENST00000549128 CFAP53Q96M91 514 aa35.46■■■■□ 3.27
CHPT1-204ENST00000549128 DIAPH1O60610 1272 aaKnown RBP35.45■■■■□ 3.27
CHPT1-204ENST00000549128 USHBP1Q8N6Y0 703 aa35.45■■■■□ 3.27
CHPT1-204ENST00000549128 EYA1Q99502 592 aa35.45■■■■□ 3.27
CHPT1-204ENST00000549128 CARD10Q9BWT7 1032 aa35.45■■■■□ 3.27
CHPT1-204ENST00000549128 CCDC184Q52MB2 194 aa35.44■■■■□ 3.26
CHPT1-204ENST00000549128 GLI3P10071 1580 aa35.43■■■■□ 3.26
CHPT1-204ENST00000549128 FAM208AQ9UK61 1670 aaKnown RBP35.4■■■■□ 3.26
CHPT1-204ENST00000549128 TCP11L2Q8N4U5 519 aa35.39■■■■□ 3.26
CHPT1-204ENST00000549128 RBM6P78332 1123 aaKnown RBP35.38■■■■□ 3.25
CHPT1-204ENST00000549128 IGSF1Q8N6C5 1336 aa35.37■■■■□ 3.25
CHPT1-204ENST00000549128 FAM98CQ17RN3 349 aaKnown RBP35.36■■■■□ 3.25
CHPT1-204ENST00000549128 RGPD1P0DJD0 1748 aa35.34■■■■□ 3.25
CHPT1-204ENST00000549128 U2SURPO15042 1029 aaKnown RBP35.34■■■■□ 3.25
CHPT1-204ENST00000549128 RXRBP28702 533 aa35.34■■■■□ 3.25
CHPT1-204ENST00000549128 AEBP1Q8IUX7 1158 aa35.34■■■■□ 3.25
CHPT1-204ENST00000549128 MIER1Q8N108 512 aa35.33■■■■□ 3.25
CHPT1-204ENST00000549128 THRAP3Q9Y2W1 955 aaKnown RBP35.33■■■■□ 3.25
CHPT1-204ENST00000549128 NCAPD2Q15021 1401 aa35.32■■■■□ 3.25
CHPT1-204ENST00000549128 BARGINQ6ZT62 677 aa35.32■■■■□ 3.24
CHPT1-204ENST00000549128 SULT6B1Q6IMI4 303 aa35.3■■■■□ 3.24
CHPT1-204ENST00000549128 HMOX1P09601 288 aa35.3■■■■□ 3.24
CHPT1-204ENST00000549128 NUDCQ9Y266 331 aa35.3■■■■□ 3.24
CHPT1-204ENST00000549128 ONECUT3O60422 494 aaPredicted RBP35.29■■■■□ 3.24
CHPT1-204ENST00000549128 DISP2A7MBM2 1401 aa35.28■■■■□ 3.24
CHPT1-204ENST00000549128 MRS2Q9HD23 443 aa35.27■■■■□ 3.24
CHPT1-204ENST00000549128 IL2RBP14784 551 aa35.26■■■■□ 3.24
CHPT1-204ENST00000549128 MEGF6O75095 1541 aa35.26■■■■□ 3.23
CHPT1-204ENST00000549128 U2AF1L5P0DN76 240 aaPredicted RBP35.25■■■■□ 3.23
CHPT1-204ENST00000549128 U2AF1Q01081 240 aaKnown RBP eCLIP35.25■■■■□ 3.23
CHPT1-204ENST00000549128 KDRP35968 1356 aa35.24■■■■□ 3.23
CHPT1-204ENST00000549128 A0A0G2JS52 829 aa35.23■■■■□ 3.23
CHPT1-204ENST00000549128 MYT1Q01538 1121 aa35.23■■■■□ 3.23
CHPT1-204ENST00000549128 SEPT12Q8IYM1 358 aa35.23■■■■□ 3.23
CHPT1-204ENST00000549128 WNK3Q9BYP7 1800 aa35.23■■■■□ 3.23
CHPT1-204ENST00000549128 THSD7AQ9UPZ6 1657 aa35.22■■■■□ 3.23
CHPT1-204ENST00000549128 RAPGEF4Q8WZA2 1011 aa35.21■■■■□ 3.23
CHPT1-204ENST00000549128 RGS12O14924 1447 aa35.2■■■■□ 3.23
CHPT1-204ENST00000549128 CDCA7Q9BWT1 371 aaPredicted RBP35.19■■■■□ 3.22
CHPT1-204ENST00000549128 TATP17735 454 aaPredicted RBP35.18■■■■□ 3.22
CHPT1-204ENST00000549128 RSPH6AQ9H0K4 717 aa35.18■■■■□ 3.22
CHPT1-204ENST00000549128 PNISRQ8TF01 805 aaKnown RBP35.17■■■■□ 3.22
CHPT1-204ENST00000549128 OVOS2A0A0G2JMS6 1433 aa35.16■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms