RNA–Protein interactions for RNA: ENST00000546992.5

LETMD1-205, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-205ENST00000546992 ADAMTS2O95450 1211 aa22.12■■□□□ 1.13
LETMD1-205ENST00000546992 RTL1A6NKG5 1358 aa22.12■■□□□ 1.13
LETMD1-205ENST00000546992 ZBTB7CA1YPR0 619 aa22.11■■□□□ 1.13
LETMD1-205ENST00000546992 MTHFSP49914 203 aa22.11■■□□□ 1.13
LETMD1-205ENST00000546992 FAM83GA6ND36 823 aa22.1■■□□□ 1.13
LETMD1-205ENST00000546992 FLT4P35916 1363 aa22.1■■□□□ 1.13
LETMD1-205ENST00000546992 HOXC9P31274 260 aa22.09■■□□□ 1.13
LETMD1-205ENST00000546992 CCDC184Q52MB2 194 aa22.09■■□□□ 1.13
LETMD1-205ENST00000546992 PRDM11Q9NQV5 511 aa22.09■■□□□ 1.13
LETMD1-205ENST00000546992 AXIN2Q9Y2T1 843 aa22.09■■□□□ 1.13
LETMD1-205ENST00000546992 KIF24Q5T7B8 1368 aa22.09■■□□□ 1.13
LETMD1-205ENST00000546992 RGPD1P0DJD0 1748 aa22.09■■□□□ 1.13
LETMD1-205ENST00000546992 SLIT2O94813 1529 aa22.08■■□□□ 1.13
LETMD1-205ENST00000546992 MIER1Q8N108 512 aa22.08■■□□□ 1.13
LETMD1-205ENST00000546992 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.07■■□□□ 1.12
LETMD1-205ENST00000546992 PPM1GO15355 546 aaPredicted RBP22.07■■□□□ 1.12
LETMD1-205ENST00000546992 HSP90AB2PQ58FF8 381 aa22.07■■□□□ 1.12
LETMD1-205ENST00000546992 IP6K1Q92551 441 aa22.07■■□□□ 1.12
LETMD1-205ENST00000546992 FAM208AQ9UK61 1670 aaKnown RBP22.07■■□□□ 1.12
LETMD1-205ENST00000546992 BLMP54132 1417 aaPredicted RBP22.06■■□□□ 1.12
LETMD1-205ENST00000546992 AMPHP49418 695 aa22.06■■□□□ 1.12
LETMD1-205ENST00000546992 INSRP06213 1382 aa22.06■■□□□ 1.12
LETMD1-205ENST00000546992 COL5A2P05997 1499 aaPredicted RBP22.06■■□□□ 1.12
LETMD1-205ENST00000546992 C8orf37Q96NL8 207 aa22.02■■□□□ 1.12
LETMD1-205ENST00000546992 BCL9LQ86UU0 1499 aa22.01■■□□□ 1.11
LETMD1-205ENST00000546992 ERBB3P21860 1342 aa22.01■■□□□ 1.11
LETMD1-205ENST00000546992 EIF4A2Q14240 407 aaKnown RBP22■■□□□ 1.11
LETMD1-205ENST00000546992 BTG4Q9NY30 223 aa22■■□□□ 1.11
LETMD1-205ENST00000546992 WNK3Q9BYP7 1800 aa22■■□□□ 1.11
LETMD1-205ENST00000546992 MEX3CQ5U5Q3 659 aaKnown RBP21.98■■□□□ 1.11
LETMD1-205ENST00000546992 ANKRD24Q8TF21 1146 aa21.98■■□□□ 1.11
LETMD1-205ENST00000546992 IL13P35225 146 aa21.97■■□□□ 1.11
LETMD1-205ENST00000546992 FNBP4Q8N3X1 1017 aaPredicted RBP21.97■■□□□ 1.11
LETMD1-205ENST00000546992 LTV1Q96GA3 475 aaPredicted RBP21.97■■□□□ 1.11
LETMD1-205ENST00000546992 NGLY1Q96IV0 654 aa21.96■■□□□ 1.11
LETMD1-205ENST00000546992 AFF2P51816 1311 aa21.96■■□□□ 1.11
LETMD1-205ENST00000546992 NCAPD2Q15021 1401 aa21.96■■□□□ 1.11
LETMD1-205ENST00000546992 CFAP53Q96M91 514 aa21.94■■□□□ 1.1
LETMD1-205ENST00000546992 MRS2Q9HD23 443 aa21.94■■□□□ 1.1
LETMD1-205ENST00000546992 STRN4Q9NRL3 753 aa21.94■■□□□ 1.1
LETMD1-205ENST00000546992 WDR17Q8IZU2 1322 aa21.94■■□□□ 1.1
LETMD1-205ENST00000546992 CCER2I3L3R5 266 aa21.93■■□□□ 1.1
LETMD1-205ENST00000546992 DIAPH1O60610 1272 aaKnown RBP21.93■■□□□ 1.1
LETMD1-205ENST00000546992 LARP1Q6PKG0 1096 aaKnown RBP21.93■■□□□ 1.1
LETMD1-205ENST00000546992 GLI3P10071 1580 aa21.92■■□□□ 1.1
LETMD1-205ENST00000546992 IGSF1Q8N6C5 1336 aa21.92■■□□□ 1.1
LETMD1-205ENST00000546992 CRB1P82279 1406 aa21.91■■□□□ 1.1
LETMD1-205ENST00000546992 NBPF6Q5VWK0 638 aa21.91■■□□□ 1.1
LETMD1-205ENST00000546992 UNC5CLQ8IV45 518 aa21.91■■□□□ 1.1
LETMD1-205ENST00000546992 NBPF4Q96M43 638 aa21.91■■□□□ 1.1
LETMD1-205ENST00000546992 EYA1Q99502 592 aa21.91■■□□□ 1.1
LETMD1-205ENST00000546992 ATRNO75882 1429 aa21.9■■□□□ 1.1
LETMD1-205ENST00000546992 USHBP1Q8N6Y0 703 aa21.89■■□□□ 1.09
LETMD1-205ENST00000546992 USP21Q9UK80 565 aa21.89■■□□□ 1.09
LETMD1-205ENST00000546992 CSB-PGBD3P0DP91 1061 aa21.88■■□□□ 1.09
LETMD1-205ENST00000546992 AEBP1Q8IUX7 1158 aa21.88■■□□□ 1.09
LETMD1-205ENST00000546992 PNISRQ8TF01 805 aaKnown RBP21.88■■□□□ 1.09
LETMD1-205ENST00000546992 SHANK3Q9BYB0 1731 aa21.87■■□□□ 1.09
LETMD1-205ENST00000546992 PARP4Q9UKK3 1724 aaKnown RBP21.87■■□□□ 1.09
LETMD1-205ENST00000546992 EVA1CP58658 441 aa21.87■■□□□ 1.09
LETMD1-205ENST00000546992 RGS17Q9UGC6 210 aaPredicted RBP21.87■■□□□ 1.09
LETMD1-205ENST00000546992 KDRP35968 1356 aa21.87■■□□□ 1.09
LETMD1-205ENST00000546992 U2SURPO15042 1029 aaKnown RBP21.86■■□□□ 1.09
LETMD1-205ENST00000546992 NLRP2Q9NX02 1062 aa21.86■■□□□ 1.09
LETMD1-205ENST00000546992 MEGF6O75095 1541 aa21.85■■□□□ 1.09
LETMD1-205ENST00000546992 SPATA31A1Q5TZJ5 1347 aa21.85■■□□□ 1.09
LETMD1-205ENST00000546992 SPATA31A5Q5VU36 1347 aa21.85■■□□□ 1.09
LETMD1-205ENST00000546992 SPATA31A7Q8IWB4 1347 aa21.85■■□□□ 1.09
LETMD1-205ENST00000546992 VPS72Q15906 364 aa21.85■■□□□ 1.09
LETMD1-205ENST00000546992 TOM1L2Q6ZVM7 507 aa21.85■■□□□ 1.09
LETMD1-205ENST00000546992 CARD10Q9BWT7 1032 aa21.85■■□□□ 1.09
LETMD1-205ENST00000546992 DISP2A7MBM2 1401 aa21.85■■□□□ 1.09
LETMD1-205ENST00000546992 PKD1L3Q7Z443 1732 aa21.85■■□□□ 1.09
LETMD1-205ENST00000546992 HMOX1P09601 288 aa21.84■■□□□ 1.09
LETMD1-205ENST00000546992 THSD7AQ9UPZ6 1657 aa21.84■■□□□ 1.09
LETMD1-205ENST00000546992 LRRC37A3O60309 1634 aa21.83■■□□□ 1.08
LETMD1-205ENST00000546992 U2AF1L5P0DN76 240 aaPredicted RBP21.82■■□□□ 1.08
LETMD1-205ENST00000546992 U2AF1Q01081 240 aaKnown RBP eCLIP21.82■■□□□ 1.08
LETMD1-205ENST00000546992 SULT6B1Q6IMI4 303 aa21.82■■□□□ 1.08
LETMD1-205ENST00000546992 RSPH6AQ9H0K4 717 aa21.82■■□□□ 1.08
LETMD1-205ENST00000546992 ADAMTS8Q9UP79 889 aa21.82■■□□□ 1.08
LETMD1-205ENST00000546992 NUDCQ9Y266 331 aa21.82■■□□□ 1.08
LETMD1-205ENST00000546992 USP35Q9P2H5 1018 aa21.81■■□□□ 1.08
LETMD1-205ENST00000546992 DLG5Q8TDM6 1919 aa21.8■■□□□ 1.08
LETMD1-205ENST00000546992 WDR43Q15061 677 aaKnown RBP eCLIP21.79■■□□□ 1.08
LETMD1-205ENST00000546992 TRPC5Q9UL62 973 aaPredicted RBP21.79■■□□□ 1.08
LETMD1-205ENST00000546992 CCDC9Q9Y3X0 531 aaKnown RBP21.78■■□□□ 1.08
LETMD1-205ENST00000546992 OVOS2A0A0G2JMS6 1433 aa21.78■■□□□ 1.08
LETMD1-205ENST00000546992 VIRMAQ69YN4 1812 aaKnown RBP21.78■■□□□ 1.08
LETMD1-205ENST00000546992 BRWD3Q6RI45 1802 aa21.78■■□□□ 1.08
LETMD1-205ENST00000546992 ZNF772Q68DY9 489 aaPredicted RBP21.77■■□□□ 1.08
LETMD1-205ENST00000546992 FAM9BQ8IZU0 186 aa21.77■■□□□ 1.08
LETMD1-205ENST00000546992 TCP11L2Q8N4U5 519 aa21.77■■□□□ 1.08
LETMD1-205ENST00000546992 GJD4Q96KN9 370 aaPredicted RBP21.77■■□□□ 1.08
LETMD1-205ENST00000546992 PLEKHF1Q96S99 279 aa21.77■■□□□ 1.08
LETMD1-205ENST00000546992 QTRT2Q9H974 415 aaKnown RBP21.77■■□□□ 1.08
LETMD1-205ENST00000546992 PRKAR2BP31323 418 aa21.76■■□□□ 1.07
LETMD1-205ENST00000546992 POTEAQ6S8J7 498 aa21.76■■□□□ 1.07
LETMD1-205ENST00000546992 FCHSD2O94868 740 aa21.74■■□□□ 1.07
LETMD1-205ENST00000546992 BARGINQ6ZT62 677 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms