RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 AMPHP49418 695 aa18.53■□□□□ 0.56
SP140-213ENST00000543928 ZNF772Q68DY9 489 aaPredicted RBP18.53■□□□□ 0.56
SP140-213ENST00000543928 UNC5CLQ8IV45 518 aa18.53■□□□□ 0.56
SP140-213ENST00000543928 RGS17Q9UGC6 210 aaPredicted RBP18.53■□□□□ 0.56
SP140-213ENST00000543928 AXIN2Q9Y2T1 843 aa18.52■□□□□ 0.56
SP140-213ENST00000543928 EMILIN1Q9Y6C2 1016 aa18.52■□□□□ 0.56
SP140-213ENST00000543928 ABCC6O95255 1503 aa18.52■□□□□ 0.56
SP140-213ENST00000543928 IP6K1Q92551 441 aa18.51■□□□□ 0.55
SP140-213ENST00000543928 STRN4Q9NRL3 753 aa18.51■□□□□ 0.55
SP140-213ENST00000543928 POLKQ9UBT6 870 aa18.51■□□□□ 0.55
SP140-213ENST00000543928 NRAPQ86VF7 1730 aa18.51■□□□□ 0.55
SP140-213ENST00000543928 MAP2P11137 1827 aaKnown RBP18.51■□□□□ 0.55
SP140-213ENST00000543928 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.5■□□□□ 0.55
SP140-213ENST00000543928 PPM1GO15355 546 aaPredicted RBP18.5■□□□□ 0.55
SP140-213ENST00000543928 HOXC9P31274 260 aa18.5■□□□□ 0.55
SP140-213ENST00000543928 RTL1A6NKG5 1358 aa18.5■□□□□ 0.55
SP140-213ENST00000543928 RGPD5Q99666 1765 aa18.5■□□□□ 0.55
SP140-213ENST00000543928 PEAK1Q9H792 1746 aa18.49■□□□□ 0.55
SP140-213ENST00000543928 EVA1CP58658 441 aa18.49■□□□□ 0.55
SP140-213ENST00000543928 COL5A2P05997 1499 aaPredicted RBP18.49■□□□□ 0.55
SP140-213ENST00000543928 FLT4P35916 1363 aa18.48■□□□□ 0.55
SP140-213ENST00000543928 KIF24Q5T7B8 1368 aa18.48■□□□□ 0.55
SP140-213ENST00000543928 QTRT2Q9H974 415 aaKnown RBP18.48■□□□□ 0.55
SP140-213ENST00000543928 TRPC5Q9UL62 973 aaPredicted RBP18.48■□□□□ 0.55
SP140-213ENST00000543928 BLMP54132 1417 aaPredicted RBP18.48■□□□□ 0.55
SP140-213ENST00000543928 VPS72Q15906 364 aa18.47■□□□□ 0.55
SP140-213ENST00000543928 ATRNO75882 1429 aa18.47■□□□□ 0.55
SP140-213ENST00000543928 SMG6Q86US8 1419 aaKnown RBP18.47■□□□□ 0.55
SP140-213ENST00000543928 PARD3Q8TEW0 1356 aa18.46■□□□□ 0.55
SP140-213ENST00000543928 HSP90AB2PQ58FF8 381 aa18.46■□□□□ 0.55
SP140-213ENST00000543928 LARP1Q6PKG0 1096 aaKnown RBP18.46■□□□□ 0.55
SP140-213ENST00000543928 POTEAQ6S8J7 498 aa18.46■□□□□ 0.55
SP140-213ENST00000543928 CCDC9Q9Y3X0 531 aaKnown RBP18.46■□□□□ 0.55
SP140-213ENST00000543928 CSB-PGBD3P0DP91 1061 aa18.45■□□□□ 0.54
SP140-213ENST00000543928 ANKRD24Q8TF21 1146 aa18.45■□□□□ 0.54
SP140-213ENST00000543928 LTV1Q96GA3 475 aaPredicted RBP18.45■□□□□ 0.54
SP140-213ENST00000543928 ERBB3P21860 1342 aa18.45■□□□□ 0.54
SP140-213ENST00000543928 INSRP06213 1382 aa18.44■□□□□ 0.54
SP140-213ENST00000543928 PPP2R1AP30153 589 aa18.44■□□□□ 0.54
SP140-213ENST00000543928 MTHFSP49914 203 aa18.44■□□□□ 0.54
SP140-213ENST00000543928 RALBP1Q15311 655 aa18.44■□□□□ 0.54
SP140-213ENST00000543928 WDR17Q8IZU2 1322 aa18.44■□□□□ 0.54
SP140-213ENST00000543928 TOM1L2Q6ZVM7 507 aa18.43■□□□□ 0.54
SP140-213ENST00000543928 GJD4Q96KN9 370 aaPredicted RBP18.43■□□□□ 0.54
SP140-213ENST00000543928 CDK12Q9NYV4 1490 aaPredicted RBP18.43■□□□□ 0.54
SP140-213ENST00000543928 SPATA31A5Q5VU36 1347 aa18.43■□□□□ 0.54
SP140-213ENST00000543928 SPATA31A7Q8IWB4 1347 aa18.43■□□□□ 0.54
SP140-213ENST00000543928 CRB1P82279 1406 aa18.41■□□□□ 0.54
SP140-213ENST00000543928 RBM6P78332 1123 aaKnown RBP18.41■□□□□ 0.54
SP140-213ENST00000543928 USP35Q9P2H5 1018 aa18.41■□□□□ 0.54
SP140-213ENST00000543928 SPATA31A1Q5TZJ5 1347 aa18.41■□□□□ 0.54
SP140-213ENST00000543928 GLI3P10071 1580 aa18.4■□□□□ 0.54
SP140-213ENST00000543928 RXRBP28702 533 aa18.4■□□□□ 0.54
SP140-213ENST00000543928 PRKRIP1Q9H875 184 aaPredicted RBP18.4■□□□□ 0.54
SP140-213ENST00000543928 NLRP2Q9NX02 1062 aa18.4■□□□□ 0.54
SP140-213ENST00000543928 EIF4A2Q14240 407 aaKnown RBP18.38■□□□□ 0.53
SP140-213ENST00000543928 CARD10Q9BWT7 1032 aa18.38■□□□□ 0.53
SP140-213ENST00000543928 FAM208AQ9UK61 1670 aaKnown RBP18.38■□□□□ 0.53
SP140-213ENST00000543928 TCP11L2Q8N4U5 519 aa18.37■□□□□ 0.53
SP140-213ENST00000543928 ANP32CO43423 234 aa18.36■□□□□ 0.53
SP140-213ENST00000543928 RGPD2P0DJD1 1756 aa18.36■□□□□ 0.53
SP140-213ENST00000543928 NBPF6Q5VWK0 638 aa18.36■□□□□ 0.53
SP140-213ENST00000543928 NBPF4Q96M43 638 aa18.36■□□□□ 0.53
SP140-213ENST00000543928 MYBBP1AQ9BQG0 1328 aaKnown RBP18.36■□□□□ 0.53
SP140-213ENST00000543928 FAM98CQ17RN3 349 aaKnown RBP18.35■□□□□ 0.53
SP140-213ENST00000543928 CFAP53Q96M91 514 aa18.35■□□□□ 0.53
SP140-213ENST00000543928 THRAP3Q9Y2W1 955 aaKnown RBP18.35■□□□□ 0.53
SP140-213ENST00000543928 COL3A1P02461 1466 aaPredicted RBP18.34■□□□□ 0.53
SP140-213ENST00000543928 BARGINQ6ZT62 677 aa18.34■□□□□ 0.53
SP140-213ENST00000543928 USHBP1Q8N6Y0 703 aa18.34■□□□□ 0.53
SP140-213ENST00000543928 DIAPH1O60610 1272 aaKnown RBP18.33■□□□□ 0.52
SP140-213ENST00000543928 IL13P35225 146 aa18.33■□□□□ 0.52
SP140-213ENST00000543928 EYA1Q99502 592 aa18.33■□□□□ 0.52
SP140-213ENST00000543928 A0A0G2JS52 829 aa18.32■□□□□ 0.52
SP140-213ENST00000543928 MYT1Q01538 1121 aa18.32■□□□□ 0.52
SP140-213ENST00000543928 ONECUT3O60422 494 aaPredicted RBP18.31■□□□□ 0.52
SP140-213ENST00000543928 RGS12O14924 1447 aa18.31■□□□□ 0.52
SP140-213ENST00000543928 SEPT12Q8IYM1 358 aa18.3■□□□□ 0.52
SP140-213ENST00000543928 IGSF1Q8N6C5 1336 aa18.29■□□□□ 0.52
SP140-213ENST00000543928 THSD7AQ9UPZ6 1657 aa18.29■□□□□ 0.52
SP140-213ENST00000543928 WNK3Q9BYP7 1800 aa18.29■□□□□ 0.52
SP140-213ENST00000543928 IL2RBP14784 551 aa18.29■□□□□ 0.52
SP140-213ENST00000543928 CDCA7Q9BWT1 371 aaPredicted RBP18.29■□□□□ 0.52
SP140-213ENST00000543928 DISP2A7MBM2 1401 aa18.29■□□□□ 0.52
SP140-213ENST00000543928 NCAPD2Q15021 1401 aa18.29■□□□□ 0.52
SP140-213ENST00000543928 DIEXFQ68CQ4 756 aaKnown RBP18.28■□□□□ 0.52
SP140-213ENST00000543928 RGPD1P0DJD0 1748 aa18.28■□□□□ 0.52
SP140-213ENST00000543928 U2SURPO15042 1029 aaKnown RBP18.27■□□□□ 0.52
SP140-213ENST00000543928 AEBP1Q8IUX7 1158 aa18.26■□□□□ 0.51
SP140-213ENST00000543928 RAPGEF4Q8WZA2 1011 aa18.26■□□□□ 0.51
SP140-213ENST00000543928 NUDCQ9Y266 331 aa18.26■□□□□ 0.51
SP140-213ENST00000543928 MEGF6O75095 1541 aa18.26■□□□□ 0.51
SP140-213ENST00000543928 SULT6B1Q6IMI4 303 aa18.25■□□□□ 0.51
SP140-213ENST00000543928 PARP4Q9UKK3 1724 aaKnown RBP18.25■□□□□ 0.51
SP140-213ENST00000543928 HMOX1P09601 288 aa18.24■□□□□ 0.51
SP140-213ENST00000543928 TATP17735 454 aaPredicted RBP18.24■□□□□ 0.51
SP140-213ENST00000543928 DDB1Q16531 1140 aa18.24■□□□□ 0.51
SP140-213ENST00000543928 ILDR2Q71H61 639 aa18.24■□□□□ 0.51
SP140-213ENST00000543928 LRRC37A3O60309 1634 aa18.23■□□□□ 0.51
SP140-213ENST00000543928 BRWD3Q6RI45 1802 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms