RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 NUTM2AQ8IVF1 878 aaPredicted RBP7.91□□□□□ -1.14
ABCF1-207ENST00000542772 PRDM11Q9NQV5 511 aa7.91□□□□□ -1.14
ABCF1-207ENST00000542772 RTL1A6NKG5 1358 aa7.91□□□□□ -1.14
ABCF1-207ENST00000542772 FLT4P35916 1363 aa7.91□□□□□ -1.14
ABCF1-207ENST00000542772 BLMP54132 1417 aaPredicted RBP7.91□□□□□ -1.14
ABCF1-207ENST00000542772 SLIT2O94813 1529 aa7.91□□□□□ -1.14
ABCF1-207ENST00000542772 LMO7Q8WWI1 1683 aa7.91□□□□□ -1.14
ABCF1-207ENST00000542772 CAMTA1Q9Y6Y1 1673 aa7.91□□□□□ -1.14
ABCF1-207ENST00000542772 PEAK1Q9H792 1746 aa7.91□□□□□ -1.14
ABCF1-207ENST00000542772 COL14A1Q05707 1796 aaKnown RBP7.9□□□□□ -1.14
ABCF1-207ENST00000542772 RGPD5Q99666 1765 aa7.9□□□□□ -1.14
ABCF1-207ENST00000542772 LRP6O75581 1613 aa7.9□□□□□ -1.14
ABCF1-207ENST00000542772 PLEKHG5O94827 1062 aa7.9□□□□□ -1.14
ABCF1-207ENST00000542772 ADAMTS2O95450 1211 aa7.9□□□□□ -1.14
ABCF1-207ENST00000542772 PNISRQ8TF01 805 aaKnown RBP7.9□□□□□ -1.14
ABCF1-207ENST00000542772 NGLY1Q96IV0 654 aa7.9□□□□□ -1.14
ABCF1-207ENST00000542772 CDK12Q9NYV4 1490 aaPredicted RBP7.89□□□□□ -1.15
ABCF1-207ENST00000542772 DIAPH1O60610 1272 aaKnown RBP7.89□□□□□ -1.15
ABCF1-207ENST00000542772 EIF4A2Q14240 407 aaKnown RBP7.89□□□□□ -1.15
ABCF1-207ENST00000542772 UNC5CLQ8IV45 518 aa7.89□□□□□ -1.15
ABCF1-207ENST00000542772 CFAP53Q96M91 514 aa7.89□□□□□ -1.15
ABCF1-207ENST00000542772 BTG4Q9NY30 223 aa7.89□□□□□ -1.15
ABCF1-207ENST00000542772 COL3A1P02461 1466 aaPredicted RBP7.88□□□□□ -1.15
ABCF1-207ENST00000542772 BCL9LQ86UU0 1499 aa7.88□□□□□ -1.15
ABCF1-207ENST00000542772 ERBB3P21860 1342 aa7.88□□□□□ -1.15
ABCF1-207ENST00000542772 WDR17Q8IZU2 1322 aa7.88□□□□□ -1.15
ABCF1-207ENST00000542772 PPM1GO15355 546 aaPredicted RBP7.88□□□□□ -1.15
ABCF1-207ENST00000542772 ONECUT3O60422 494 aaPredicted RBP7.88□□□□□ -1.15
ABCF1-207ENST00000542772 NBPF6Q5VWK0 638 aa7.88□□□□□ -1.15
ABCF1-207ENST00000542772 ANKRD24Q8TF21 1146 aa7.88□□□□□ -1.15
ABCF1-207ENST00000542772 NBPF4Q96M43 638 aa7.88□□□□□ -1.15
ABCF1-207ENST00000542772 EYA1Q99502 592 aa7.88□□□□□ -1.15
ABCF1-207ENST00000542772 CARD10Q9BWT7 1032 aa7.88□□□□□ -1.15
ABCF1-207ENST00000542772 NWD2Q9ULI1 1742 aa7.88□□□□□ -1.15
ABCF1-207ENST00000542772 EVA1CP58658 441 aa7.87□□□□□ -1.15
ABCF1-207ENST00000542772 VPS72Q15906 364 aa7.87□□□□□ -1.15
ABCF1-207ENST00000542772 C8orf37Q96NL8 207 aa7.87□□□□□ -1.15
ABCF1-207ENST00000542772 USP21Q9UK80 565 aa7.87□□□□□ -1.15
ABCF1-207ENST00000542772 NUDCQ9Y266 331 aa7.87□□□□□ -1.15
ABCF1-207ENST00000542772 THRAP3Q9Y2W1 955 aaKnown RBP7.87□□□□□ -1.15
ABCF1-207ENST00000542772 COL5A2P05997 1499 aaPredicted RBP7.87□□□□□ -1.15
ABCF1-207ENST00000542772 NCAPD2Q15021 1401 aa7.86□□□□□ -1.15
ABCF1-207ENST00000542772 IGSF1Q8N6C5 1336 aa7.86□□□□□ -1.15
ABCF1-207ENST00000542772 ZBTB7CA1YPR0 619 aa7.86□□□□□ -1.15
ABCF1-207ENST00000542772 FCHSD2O94868 740 aa7.86□□□□□ -1.15
ABCF1-207ENST00000542772 LARP1Q6PKG0 1096 aaKnown RBP7.86□□□□□ -1.15
ABCF1-207ENST00000542772 RGS17Q9UGC6 210 aaPredicted RBP7.86□□□□□ -1.15
ABCF1-207ENST00000542772 ADAMTS8Q9UP79 889 aa7.86□□□□□ -1.15
ABCF1-207ENST00000542772 KDRP35968 1356 aa7.85□□□□□ -1.15
ABCF1-207ENST00000542772 AFF2P51816 1311 aa7.85□□□□□ -1.15
ABCF1-207ENST00000542772 SPATA31A1Q5TZJ5 1347 aa7.85□□□□□ -1.15
ABCF1-207ENST00000542772 SPATA31A5Q5VU36 1347 aa7.85□□□□□ -1.15
ABCF1-207ENST00000542772 SPATA31A7Q8IWB4 1347 aa7.85□□□□□ -1.15
ABCF1-207ENST00000542772 MEX3CQ5U5Q3 659 aaKnown RBP7.85□□□□□ -1.15
ABCF1-207ENST00000542772 ZNF772Q68DY9 489 aaPredicted RBP7.85□□□□□ -1.15
ABCF1-207ENST00000542772 BARGINQ6ZT62 677 aa7.85□□□□□ -1.15
ABCF1-207ENST00000542772 LTV1Q96GA3 475 aaPredicted RBP7.85□□□□□ -1.15
ABCF1-207ENST00000542772 PLEKHF1Q96S99 279 aa7.85□□□□□ -1.15
ABCF1-207ENST00000542772 QTRT2Q9H974 415 aaKnown RBP7.85□□□□□ -1.15
ABCF1-207ENST00000542772 MRS2Q9HD23 443 aa7.85□□□□□ -1.15
ABCF1-207ENST00000542772 TRPC5Q9UL62 973 aaPredicted RBP7.85□□□□□ -1.15
ABCF1-207ENST00000542772 RGPD1P0DJD0 1748 aa7.85□□□□□ -1.15
ABCF1-207ENST00000542772 NRAPQ86VF7 1730 aa7.85□□□□□ -1.15
ABCF1-207ENST00000542772 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.85□□□□□ -1.15
ABCF1-207ENST00000542772 PLCH1Q4KWH8 1693 aa7.85□□□□□ -1.15
ABCF1-207ENST00000542772 CRB1P82279 1406 aa7.85□□□□□ -1.15
ABCF1-207ENST00000542772 PLEKHG2Q9H7P9 1386 aa7.84□□□□□ -1.15
ABCF1-207ENST00000542772 RGPD2P0DJD1 1756 aa7.84□□□□□ -1.15
ABCF1-207ENST00000542772 FAM208AQ9UK61 1670 aaKnown RBP7.84□□□□□ -1.15
ABCF1-207ENST00000542772 TOM1L2Q6ZVM7 507 aa7.84□□□□□ -1.15
ABCF1-207ENST00000542772 GJD4Q96KN9 370 aaPredicted RBP7.84□□□□□ -1.15
ABCF1-207ENST00000542772 RSPH6AQ9H0K4 717 aa7.84□□□□□ -1.15
ABCF1-207ENST00000542772 PNNQ9H307 717 aaKnown RBP7.84□□□□□ -1.15
ABCF1-207ENST00000542772 STRN4Q9NRL3 753 aa7.84□□□□□ -1.15
ABCF1-207ENST00000542772 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.84□□□□□ -1.152e-6■■■■□ 24.7
ABCF1-207ENST00000542772 ATRNO75882 1429 aa7.84□□□□□ -1.15
ABCF1-207ENST00000542772 U2SURPO15042 1029 aaKnown RBP7.83□□□□□ -1.16
ABCF1-207ENST00000542772 U2AF1L5P0DN76 240 aaPredicted RBP7.83□□□□□ -1.16
ABCF1-207ENST00000542772 CSB-PGBD3P0DP91 1061 aa7.83□□□□□ -1.16
ABCF1-207ENST00000542772 U2AF1Q01081 240 aaKnown RBP eCLIP7.83□□□□□ -1.16
ABCF1-207ENST00000542772 NCBP3Q53F19 620 aaKnown RBP7.83□□□□□ -1.16
ABCF1-207ENST00000542772 SULT6B1Q6IMI4 303 aa7.83□□□□□ -1.16
ABCF1-207ENST00000542772 TCP11L2Q8N4U5 519 aa7.83□□□□□ -1.16
ABCF1-207ENST00000542772 CDCA7Q9BWT1 371 aaPredicted RBP7.83□□□□□ -1.16
ABCF1-207ENST00000542772 NLRP2Q9NX02 1062 aa7.83□□□□□ -1.16
ABCF1-207ENST00000542772 RBM6P78332 1123 aaKnown RBP7.82□□□□□ -1.16
ABCF1-207ENST00000542772 DISP2A7MBM2 1401 aa7.81□□□□□ -1.16
ABCF1-207ENST00000542772 HMOX1P09601 288 aa7.81□□□□□ -1.16
ABCF1-207ENST00000542772 IL2RBP14784 551 aa7.81□□□□□ -1.16
ABCF1-207ENST00000542772 WDR43Q15061 677 aaKnown RBP eCLIP7.81□□□□□ -1.16
ABCF1-207ENST00000542772 AMOTQ4VCS5 1084 aa7.81□□□□□ -1.16
ABCF1-207ENST00000542772 AEBP1Q8IUX7 1158 aa7.81□□□□□ -1.16
ABCF1-207ENST00000542772 RUNDC1Q96C34 613 aa7.81□□□□□ -1.16
ABCF1-207ENST00000542772 PHACTR3Q96KR7 559 aa7.81□□□□□ -1.16
ABCF1-207ENST00000542772 EXOC5O00471 708 aa7.8□□□□□ -1.16
ABCF1-207ENST00000542772 TATP17735 454 aaPredicted RBP7.8□□□□□ -1.16
ABCF1-207ENST00000542772 PRKAR2BP31323 418 aa7.8□□□□□ -1.16
ABCF1-207ENST00000542772 POTEAQ6S8J7 498 aa7.8□□□□□ -1.16
ABCF1-207ENST00000542772 FAM9BQ8IZU0 186 aa7.8□□□□□ -1.16
ABCF1-207ENST00000542772 USHBP1Q8N6Y0 703 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms