RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 CABLES1Q8TDN4 633 aa13.68□□□□□ -0.22
CLPB-210ENST00000539148 IP6K1Q92551 441 aa13.68□□□□□ -0.22
CLPB-210ENST00000539148 PNNQ9H307 717 aaKnown RBP13.68□□□□□ -0.22
CLPB-210ENST00000539148 NUTM2BA6NNL0 878 aaPredicted RBP13.67□□□□□ -0.22
CLPB-210ENST00000539148 NUTM2EB1AL46 878 aaPredicted RBP13.67□□□□□ -0.22
CLPB-210ENST00000539148 NUTM2AQ8IVF1 878 aaPredicted RBP13.67□□□□□ -0.22
CLPB-210ENST00000539148 MRS2Q9HD23 443 aa13.67□□□□□ -0.22
CLPB-210ENST00000539148 INSRP06213 1382 aa13.67□□□□□ -0.22
CLPB-210ENST00000539148 KIAA0232Q92628 1395 aa13.67□□□□□ -0.22
CLPB-210ENST00000539148 DIAPH1O60610 1272 aaKnown RBP13.66□□□□□ -0.22
CLPB-210ENST00000539148 NEFMP07197 916 aa13.66□□□□□ -0.22
CLPB-210ENST00000539148 RRS1Q15050 365 aaKnown RBP13.66□□□□□ -0.22
CLPB-210ENST00000539148 WDR43Q15061 677 aaKnown RBP eCLIP13.66□□□□□ -0.22
CLPB-210ENST00000539148 RGPD5Q99666 1765 aa13.66□□□□□ -0.22
CLPB-210ENST00000539148 HOXC9P31274 260 aa13.65□□□□□ -0.22
CLPB-210ENST00000539148 EVA1CP58658 441 aa13.65□□□□□ -0.22
CLPB-210ENST00000539148 EMILIN1Q9Y6C2 1016 aa13.65□□□□□ -0.22
CLPB-210ENST00000539148 PLCH1Q4KWH8 1693 aa13.64□□□□□ -0.23
CLPB-210ENST00000539148 ADAMTS2O95450 1211 aa13.64□□□□□ -0.23
CLPB-210ENST00000539148 COL18A1P39060 1754 aa13.63□□□□□ -0.23
CLPB-210ENST00000539148 CSB-PGBD3P0DP91 1061 aa13.63□□□□□ -0.23
CLPB-210ENST00000539148 NGLY1Q96IV0 654 aa13.63□□□□□ -0.23
CLPB-210ENST00000539148 PEAK1Q9H792 1746 aa13.62□□□□□ -0.23
CLPB-210ENST00000539148 RGS17Q9UGC6 210 aaPredicted RBP13.62□□□□□ -0.23
CLPB-210ENST00000539148 LMO7Q8WWI1 1683 aa13.62□□□□□ -0.23
CLPB-210ENST00000539148 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.61□□□□□ -0.23
CLPB-210ENST00000539148 FAM83GA6ND36 823 aa13.6□□□□□ -0.23
CLPB-210ENST00000539148 U2SURPO15042 1029 aaKnown RBP13.6□□□□□ -0.23
CLPB-210ENST00000539148 CHRNA2Q15822 529 aa13.6□□□□□ -0.23
CLPB-210ENST00000539148 HSP90AB2PQ58FF8 381 aa13.6□□□□□ -0.23
CLPB-210ENST00000539148 ANKRD24Q8TF21 1146 aa13.6□□□□□ -0.23
CLPB-210ENST00000539148 BTG4Q9NY30 223 aa13.6□□□□□ -0.23
CLPB-210ENST00000539148 FBLN1P23142 703 aa13.59□□□□□ -0.23
CLPB-210ENST00000539148 C8orf37Q96NL8 207 aa13.59□□□□□ -0.23
CLPB-210ENST00000539148 ERBB3P21860 1342 aa13.59□□□□□ -0.23
CLPB-210ENST00000539148 WDR17Q8IZU2 1322 aa13.59□□□□□ -0.23
CLPB-210ENST00000539148 U2AF1L5P0DN76 240 aaPredicted RBP13.58□□□□□ -0.24
CLPB-210ENST00000539148 U2AF1Q01081 240 aaKnown RBP eCLIP13.58□□□□□ -0.24
CLPB-210ENST00000539148 LTV1Q96GA3 475 aaPredicted RBP13.58□□□□□ -0.24
CLPB-210ENST00000539148 CAMTA1Q9Y6Y1 1673 aa13.58□□□□□ -0.24
CLPB-210ENST00000539148 PLEKHG2Q9H7P9 1386 aa13.58□□□□□ -0.24
CLPB-210ENST00000539148 COL3A1P02461 1466 aaPredicted RBP13.57□□□□□ -0.24
CLPB-210ENST00000539148 COL5A2P05997 1499 aaPredicted RBP13.57□□□□□ -0.24
CLPB-210ENST00000539148 FCHSD2O94868 740 aa13.57□□□□□ -0.24
CLPB-210ENST00000539148 IL13P35225 146 aa13.57□□□□□ -0.24
CLPB-210ENST00000539148 EIF4A2Q14240 407 aaKnown RBP13.57□□□□□ -0.24
CLPB-210ENST00000539148 TOM1L2Q6ZVM7 507 aa13.57□□□□□ -0.24
CLPB-210ENST00000539148 NLRP2Q9NX02 1062 aa13.57□□□□□ -0.24
CLPB-210ENST00000539148 CRB1P82279 1406 aa13.56□□□□□ -0.24
CLPB-210ENST00000539148 SLIT2O94813 1529 aa13.56□□□□□ -0.24
CLPB-210ENST00000539148 ZNF772Q68DY9 489 aaPredicted RBP13.56□□□□□ -0.24
CLPB-210ENST00000539148 UNC5CLQ8IV45 518 aa13.56□□□□□ -0.24
CLPB-210ENST00000539148 FNBP4Q8N3X1 1017 aaPredicted RBP13.56□□□□□ -0.24
CLPB-210ENST00000539148 CDCA7Q9BWT1 371 aaPredicted RBP13.56□□□□□ -0.24
CLPB-210ENST00000539148 STRN4Q9NRL3 753 aa13.56□□□□□ -0.24
CLPB-210ENST00000539148 THRAP3Q9Y2W1 955 aaKnown RBP13.56□□□□□ -0.24
CLPB-210ENST00000539148 LRP6O75581 1613 aa13.56□□□□□ -0.24
CLPB-210ENST00000539148 RGPD1P0DJD0 1748 aa13.56□□□□□ -0.24
CLPB-210ENST00000539148 NRAPQ86VF7 1730 aa13.56□□□□□ -0.24
CLPB-210ENST00000539148 PNISRQ8TF01 805 aaKnown RBP13.55□□□□□ -0.24
CLPB-210ENST00000539148 RAPGEF4Q8WZA2 1011 aa13.55□□□□□ -0.24
CLPB-210ENST00000539148 CARD10Q9BWT7 1032 aa13.55□□□□□ -0.24
CLPB-210ENST00000539148 USP21Q9UK80 565 aa13.55□□□□□ -0.24
CLPB-210ENST00000539148 AXIN2Q9Y2T1 843 aa13.55□□□□□ -0.24
CLPB-210ENST00000539148 IGSF1Q8N6C5 1336 aa13.55□□□□□ -0.24
CLPB-210ENST00000539148 MAPK8IP3Q9UPT6 1336 aa13.55□□□□□ -0.24
CLPB-210ENST00000539148 RGPD2P0DJD1 1756 aa13.55□□□□□ -0.24
CLPB-210ENST00000539148 PARP4Q9UKK3 1724 aaKnown RBP13.54□□□□□ -0.24
CLPB-210ENST00000539148 POTEAQ6S8J7 498 aa13.54□□□□□ -0.24
CLPB-210ENST00000539148 FAM9BQ8IZU0 186 aa13.54□□□□□ -0.24
CLPB-210ENST00000539148 NGEFQ8N5V2 710 aa13.54□□□□□ -0.24
CLPB-210ENST00000539148 TRPC5Q9UL62 973 aaPredicted RBP13.54□□□□□ -0.24
CLPB-210ENST00000539148 CCDC9Q9Y3X0 531 aaKnown RBP13.54□□□□□ -0.24
CLPB-210ENST00000539148 EYA1Q99502 592 aa13.53□□□□□ -0.24
CLPB-210ENST00000539148 AFF2P51816 1311 aa13.53□□□□□ -0.24
CLPB-210ENST00000539148 TATP17735 454 aaPredicted RBP13.52□□□□□ -0.25
CLPB-210ENST00000539148 VPS72Q15906 364 aa13.52□□□□□ -0.25
CLPB-210ENST00000539148 SULT6B1Q6IMI4 303 aa13.52□□□□□ -0.25
CLPB-210ENST00000539148 KDRP35968 1356 aa13.51□□□□□ -0.25
CLPB-210ENST00000539148 AMOTQ4VCS5 1084 aa13.51□□□□□ -0.25
CLPB-210ENST00000539148 NBPF6Q5VWK0 638 aa13.51□□□□□ -0.25
CLPB-210ENST00000539148 TCP11L2Q8N4U5 519 aa13.51□□□□□ -0.25
CLPB-210ENST00000539148 RUNDC1Q96C34 613 aa13.51□□□□□ -0.25
CLPB-210ENST00000539148 NBPF4Q96M43 638 aa13.51□□□□□ -0.25
CLPB-210ENST00000539148 YTHDC1Q96MU7 727 aaKnown RBP13.51□□□□□ -0.25
CLPB-210ENST00000539148 PLEKHO1Q53GL0 409 aaPredicted RBP13.5□□□□□ -0.25
CLPB-210ENST00000539148 LARP1Q6PKG0 1096 aaKnown RBP13.5□□□□□ -0.25
CLPB-210ENST00000539148 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.5□□□□□ -0.25
CLPB-210ENST00000539148 ADAMTS8Q9UP79 889 aa13.5□□□□□ -0.25
CLPB-210ENST00000539148 SPG7Q9UQ90 795 aa13.5□□□□□ -0.25
CLPB-210ENST00000539148 WNK3Q9BYP7 1800 aa13.5□□□□□ -0.25
CLPB-210ENST00000539148 NCAPD2Q15021 1401 aa13.49□□□□□ -0.25
CLPB-210ENST00000539148 SPATA31A5Q5VU36 1347 aa13.49□□□□□ -0.25
CLPB-210ENST00000539148 SPATA31A7Q8IWB4 1347 aa13.49□□□□□ -0.25
CLPB-210ENST00000539148 HMOX1P09601 288 aa13.49□□□□□ -0.25
CLPB-210ENST00000539148 IL2RBP14784 551 aa13.49□□□□□ -0.25
CLPB-210ENST00000539148 CCDC184Q52MB2 194 aa13.49□□□□□ -0.25
CLPB-210ENST00000539148 BCL9LQ86UU0 1499 aa13.48□□□□□ -0.25
CLPB-210ENST00000539148 SPATA31A1Q5TZJ5 1347 aa13.48□□□□□ -0.25
CLPB-210ENST00000539148 PRKAR2BP31323 418 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms