RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 MARF1Q9Y4F3 1742 aaKnown RBP15.22■□□□□ 0.03
TRAPPC4-211ENST00000533012 KIF24Q5T7B8 1368 aa15.22■□□□□ 0.03
TRAPPC4-211ENST00000533012 BCL9LQ86UU0 1499 aa15.21■□□□□ 0.03
TRAPPC4-211ENST00000533012 CSB-PGBD3P0DP91 1061 aa15.21■□□□□ 0.03
TRAPPC4-211ENST00000533012 RALBP1Q15311 655 aa15.21■□□□□ 0.03
TRAPPC4-211ENST00000533012 CCDC9Q9Y3X0 531 aaKnown RBP15.21■□□□□ 0.03
TRAPPC4-211ENST00000533012 MTHFSP49914 203 aa15.2■□□□□ 0.02
TRAPPC4-211ENST00000533012 VPS72Q15906 364 aa15.2■□□□□ 0.02
TRAPPC4-211ENST00000533012 COL14A1Q05707 1796 aaKnown RBP15.2■□□□□ 0.02
TRAPPC4-211ENST00000533012 HSP90AB2PQ58FF8 381 aa15.19■□□□□ 0.02
TRAPPC4-211ENST00000533012 ANKRD24Q8TF21 1146 aa15.19■□□□□ 0.02
TRAPPC4-211ENST00000533012 LTV1Q96GA3 475 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC4-211ENST00000533012 RTL1A6NKG5 1358 aa15.19■□□□□ 0.02
TRAPPC4-211ENST00000533012 FLT4P35916 1363 aa15.19■□□□□ 0.02
TRAPPC4-211ENST00000533012 CAMTA1Q9Y6Y1 1673 aa15.19■□□□□ 0.02
TRAPPC4-211ENST00000533012 LARP1Q6PKG0 1096 aaKnown RBP15.18■□□□□ 0.02
TRAPPC4-211ENST00000533012 TOM1L2Q6ZVM7 507 aa15.18■□□□□ 0.02
TRAPPC4-211ENST00000533012 GJD4Q96KN9 370 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC4-211ENST00000533012 BLMP54132 1417 aaPredicted RBP15.17■□□□□ 0.02
TRAPPC4-211ENST00000533012 RXRBP28702 533 aa15.17■□□□□ 0.02
TRAPPC4-211ENST00000533012 PPP2R1AP30153 589 aa15.17■□□□□ 0.02
TRAPPC4-211ENST00000533012 POTEAQ6S8J7 498 aa15.17■□□□□ 0.02
TRAPPC4-211ENST00000533012 WDR17Q8IZU2 1322 aa15.17■□□□□ 0.02
TRAPPC4-211ENST00000533012 COL5A2P05997 1499 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC4-211ENST00000533012 INSRP06213 1382 aa15.16■□□□□ 0.02
TRAPPC4-211ENST00000533012 RBM6P78332 1123 aaKnown RBP15.16■□□□□ 0.02
TRAPPC4-211ENST00000533012 NLRP2Q9NX02 1062 aa15.16■□□□□ 0.02
TRAPPC4-211ENST00000533012 USP35Q9P2H5 1018 aa15.16■□□□□ 0.02
TRAPPC4-211ENST00000533012 ERBB3P21860 1342 aa15.16■□□□□ 0.02
TRAPPC4-211ENST00000533012 ANKRD26Q9UPS8 1709 aa15.15■□□□□ 0.02
TRAPPC4-211ENST00000533012 PARD3Q8TEW0 1356 aa15.15■□□□□ 0.02
TRAPPC4-211ENST00000533012 ANP32CO43423 234 aa15.15■□□□□ 0.02
TRAPPC4-211ENST00000533012 CARD10Q9BWT7 1032 aa15.15■□□□□ 0.02
TRAPPC4-211ENST00000533012 PRKRIP1Q9H875 184 aaPredicted RBP15.15■□□□□ 0.02
TRAPPC4-211ENST00000533012 ABCC6O95255 1503 aa15.15■□□□□ 0.02
TRAPPC4-211ENST00000533012 ATRNO75882 1429 aa15.15■□□□□ 0.02
TRAPPC4-211ENST00000533012 SPATA31A5Q5VU36 1347 aa15.15■□□□□ 0.02
TRAPPC4-211ENST00000533012 SPATA31A7Q8IWB4 1347 aa15.15■□□□□ 0.02
TRAPPC4-211ENST00000533012 TCP11L2Q8N4U5 519 aa15.14■□□□□ 0.01
TRAPPC4-211ENST00000533012 CFAP53Q96M91 514 aa15.14■□□□□ 0.01
TRAPPC4-211ENST00000533012 SPATA31A1Q5TZJ5 1347 aa15.14■□□□□ 0.01
TRAPPC4-211ENST00000533012 LMO7Q8WWI1 1683 aa15.13■□□□□ 0.01
TRAPPC4-211ENST00000533012 CRB1P82279 1406 aa15.13■□□□□ 0.01
TRAPPC4-211ENST00000533012 SMG6Q86US8 1419 aaKnown RBP15.13■□□□□ 0.01
TRAPPC4-211ENST00000533012 NWD2Q9ULI1 1742 aa15.13■□□□□ 0.01
TRAPPC4-211ENST00000533012 THRAP3Q9Y2W1 955 aaKnown RBP15.13■□□□□ 0.01
TRAPPC4-211ENST00000533012 COL18A1P39060 1754 aa15.13■□□□□ 0.01
TRAPPC4-211ENST00000533012 EIF4A2Q14240 407 aaKnown RBP15.12■□□□□ 0.01
TRAPPC4-211ENST00000533012 PLCH1Q4KWH8 1693 aa15.12■□□□□ 0.01
TRAPPC4-211ENST00000533012 MYBBP1AQ9BQG0 1328 aaKnown RBP15.12■□□□□ 0.01
TRAPPC4-211ENST00000533012 LTN1O94822 1766 aa15.11■□□□□ 0.01
TRAPPC4-211ENST00000533012 DIAPH1O60610 1272 aaKnown RBP15.11■□□□□ 0.01
TRAPPC4-211ENST00000533012 NBPF6Q5VWK0 638 aa15.11■□□□□ 0.01
TRAPPC4-211ENST00000533012 NBPF4Q96M43 638 aa15.11■□□□□ 0.01
TRAPPC4-211ENST00000533012 ONECUT3O60422 494 aaPredicted RBP15.1■□□□□ 0.01
TRAPPC4-211ENST00000533012 IL13P35225 146 aa15.1■□□□□ 0.01
TRAPPC4-211ENST00000533012 FAM98CQ17RN3 349 aaKnown RBP15.1■□□□□ 0.01
TRAPPC4-211ENST00000533012 BARGINQ6ZT62 677 aa15.1■□□□□ 0.01
TRAPPC4-211ENST00000533012 MAP2P11137 1827 aaKnown RBP15.1■□□□□ 0.01
TRAPPC4-211ENST00000533012 CDK12Q9NYV4 1490 aaPredicted RBP15.09■□□□□ 0.01
TRAPPC4-211ENST00000533012 A0A0G2JS52 829 aa15.09■□□□□ 0.01
TRAPPC4-211ENST00000533012 MYT1Q01538 1121 aa15.09■□□□□ 0.01
TRAPPC4-211ENST00000533012 EYA1Q99502 592 aa15.09■□□□□ 0.01
TRAPPC4-211ENST00000533012 CDCA7Q9BWT1 371 aaPredicted RBP15.09■□□□□ 0.01
TRAPPC4-211ENST00000533012 NUDCQ9Y266 331 aa15.09■□□□□ 0.01
TRAPPC4-211ENST00000533012 NRAPQ86VF7 1730 aa15.08■□□□□ 0
TRAPPC4-211ENST00000533012 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.08■□□□□ 0
TRAPPC4-211ENST00000533012 PEAK1Q9H792 1746 aa15.08■□□□□ 0
TRAPPC4-211ENST00000533012 DIEXFQ68CQ4 756 aaKnown RBP15.07■□□□□ 0
TRAPPC4-211ENST00000533012 SEPT12Q8IYM1 358 aa15.07■□□□□ 0
TRAPPC4-211ENST00000533012 IL2RBP14784 551 aa15.06■□□□□ 0
TRAPPC4-211ENST00000533012 USHBP1Q8N6Y0 703 aa15.06■□□□□ 0
TRAPPC4-211ENST00000533012 U2SURPO15042 1029 aaKnown RBP15.05■□□□□ -0
TRAPPC4-211ENST00000533012 RAPGEF4Q8WZA2 1011 aa15.05■□□□□ -0
TRAPPC4-211ENST00000533012 RGPD5Q99666 1765 aa15.05■□□□□ -0
TRAPPC4-211ENST00000533012 IGSF1Q8N6C5 1336 aa15.04■□□□□ -0
TRAPPC4-211ENST00000533012 EXOC5O00471 708 aa15.04■□□□□ -0
TRAPPC4-211ENST00000533012 SULT6B1Q6IMI4 303 aa15.04■□□□□ -0
TRAPPC4-211ENST00000533012 GLI3P10071 1580 aa15.03■□□□□ -0
TRAPPC4-211ENST00000533012 TATP17735 454 aaPredicted RBP15.03■□□□□ -0
TRAPPC4-211ENST00000533012 PDE3BQ13370 1112 aa15.03■□□□□ -0
TRAPPC4-211ENST00000533012 DDB1Q16531 1140 aa15.03■□□□□ -0
TRAPPC4-211ENST00000533012 U2AF1L5P0DN76 240 aaPredicted RBP15.02■□□□□ -0
TRAPPC4-211ENST00000533012 U2AF1Q01081 240 aaKnown RBP eCLIP15.02■□□□□ -0
TRAPPC4-211ENST00000533012 HMOX1P09601 288 aa15.01□□□□□ -0.01
TRAPPC4-211ENST00000533012 KRT27Q7Z3Y8 459 aa15□□□□□ -0.01
TRAPPC4-211ENST00000533012 AEBP1Q8IUX7 1158 aa15□□□□□ -0.01
TRAPPC4-211ENST00000533012 ZCRB1Q8TBF4 217 aaKnown RBP15□□□□□ -0.01
TRAPPC4-211ENST00000533012 COL3A1P02461 1466 aaPredicted RBP15□□□□□ -0.01
TRAPPC4-211ENST00000533012 RGS12O14924 1447 aa15□□□□□ -0.01
TRAPPC4-211ENST00000533012 SPG7Q9UQ90 795 aa14.99□□□□□ -0.01
TRAPPC4-211ENST00000533012 FAM208AQ9UK61 1670 aaKnown RBP14.99□□□□□ -0.01
TRAPPC4-211ENST00000533012 DISP2A7MBM2 1401 aa14.99□□□□□ -0.01
TRAPPC4-211ENST00000533012 FCHSD2O94868 740 aa14.98□□□□□ -0.01
TRAPPC4-211ENST00000533012 WDR43Q15061 677 aaKnown RBP eCLIP14.98□□□□□ -0.01
TRAPPC4-211ENST00000533012 PLEKHO1Q53GL0 409 aaPredicted RBP14.98□□□□□ -0.01
TRAPPC4-211ENST00000533012 ILDR2Q71H61 639 aa14.98□□□□□ -0.01
TRAPPC4-211ENST00000533012 PNNQ9H307 717 aaKnown RBP14.98□□□□□ -0.01
TRAPPC4-211ENST00000533012 MRS2Q9HD23 443 aa14.98□□□□□ -0.01
TRAPPC4-211ENST00000533012 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms