RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 AMPHP49418 695 aa30.33■■■□□ 2.45
LRRK1-208ENST00000532029 RRS1Q15050 365 aaKnown RBP30.33■■■□□ 2.45
LRRK1-208ENST00000532029 EVA1CP58658 441 aa30.32■■■□□ 2.44
LRRK1-208ENST00000532029 TRPC5Q9UL62 973 aaPredicted RBP30.32■■■□□ 2.44
LRRK1-208ENST00000532029 CAMTA1Q9Y6Y1 1673 aa30.32■■■□□ 2.44
LRRK1-208ENST00000532029 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.31■■■□□ 2.44
LRRK1-208ENST00000532029 QTRT2Q9H974 415 aaKnown RBP30.31■■■□□ 2.44
LRRK1-208ENST00000532029 STRN4Q9NRL3 753 aa30.31■■■□□ 2.44
LRRK1-208ENST00000532029 COL18A1P39060 1754 aa30.31■■■□□ 2.44
LRRK1-208ENST00000532029 NRAPQ86VF7 1730 aa30.3■■■□□ 2.44
LRRK1-208ENST00000532029 IP6K1Q92551 441 aa30.29■■■□□ 2.44
LRRK1-208ENST00000532029 AXIN2Q9Y2T1 843 aa30.29■■■□□ 2.44
LRRK1-208ENST00000532029 RTL1A6NKG5 1358 aa30.28■■■□□ 2.44
LRRK1-208ENST00000532029 CCDC9Q9Y3X0 531 aaKnown RBP30.28■■■□□ 2.44
LRRK1-208ENST00000532029 ATRNO75882 1429 aa30.28■■■□□ 2.44
LRRK1-208ENST00000532029 KIF24Q5T7B8 1368 aa30.27■■■□□ 2.44
LRRK1-208ENST00000532029 COL5A2P05997 1499 aaPredicted RBP30.26■■■□□ 2.44
LRRK1-208ENST00000532029 PPM1GO15355 546 aaPredicted RBP30.26■■■□□ 2.43
LRRK1-208ENST00000532029 HOXC9P31274 260 aa30.26■■■□□ 2.43
LRRK1-208ENST00000532029 BLMP54132 1417 aaPredicted RBP30.26■■■□□ 2.43
LRRK1-208ENST00000532029 VPS72Q15906 364 aa30.26■■■□□ 2.43
LRRK1-208ENST00000532029 EMILIN1Q9Y6C2 1016 aa30.26■■■□□ 2.43
LRRK1-208ENST00000532029 POLKQ9UBT6 870 aa30.25■■■□□ 2.43
LRRK1-208ENST00000532029 FLT4P35916 1363 aa30.25■■■□□ 2.43
LRRK1-208ENST00000532029 CSB-PGBD3P0DP91 1061 aa30.24■■■□□ 2.43
LRRK1-208ENST00000532029 MAP2P11137 1827 aaKnown RBP30.22■■■□□ 2.43
LRRK1-208ENST00000532029 RGPD5Q99666 1765 aa30.21■■■□□ 2.43
LRRK1-208ENST00000532029 RXRBP28702 533 aa30.21■■■□□ 2.43
LRRK1-208ENST00000532029 RBM6P78332 1123 aaKnown RBP30.21■■■□□ 2.43
LRRK1-208ENST00000532029 LARP1Q6PKG0 1096 aaKnown RBP30.21■■■□□ 2.43
LRRK1-208ENST00000532029 WDR17Q8IZU2 1322 aa30.21■■■□□ 2.43
LRRK1-208ENST00000532029 PEAK1Q9H792 1746 aa30.2■■■□□ 2.43
LRRK1-208ENST00000532029 ANKRD24Q8TF21 1146 aa30.2■■■□□ 2.43
LRRK1-208ENST00000532029 GJD4Q96KN9 370 aaPredicted RBP30.2■■■□□ 2.43
LRRK1-208ENST00000532029 LTV1Q96GA3 475 aaPredicted RBP30.19■■■□□ 2.42
LRRK1-208ENST00000532029 ERBB3P21860 1342 aa30.19■■■□□ 2.42
LRRK1-208ENST00000532029 TOM1L2Q6ZVM7 507 aa30.18■■■□□ 2.42
LRRK1-208ENST00000532029 SPATA31A5Q5VU36 1347 aa30.18■■■□□ 2.42
LRRK1-208ENST00000532029 SPATA31A7Q8IWB4 1347 aa30.18■■■□□ 2.42
LRRK1-208ENST00000532029 INSRP06213 1382 aa30.17■■■□□ 2.42
LRRK1-208ENST00000532029 CRB1P82279 1406 aa30.17■■■□□ 2.42
LRRK1-208ENST00000532029 SMG6Q86US8 1419 aaKnown RBP30.17■■■□□ 2.42
LRRK1-208ENST00000532029 HSP90AB2PQ58FF8 381 aa30.17■■■□□ 2.42
LRRK1-208ENST00000532029 SPATA31A1Q5TZJ5 1347 aa30.15■■■□□ 2.42
LRRK1-208ENST00000532029 USP35Q9P2H5 1018 aa30.14■■■□□ 2.42
LRRK1-208ENST00000532029 GLI3P10071 1580 aa30.13■■■□□ 2.41
LRRK1-208ENST00000532029 MTHFSP49914 203 aa30.13■■■□□ 2.41
LRRK1-208ENST00000532029 NLRP2Q9NX02 1062 aa30.13■■■□□ 2.41
LRRK1-208ENST00000532029 PARD3Q8TEW0 1356 aa30.13■■■□□ 2.41
LRRK1-208ENST00000532029 CDK12Q9NYV4 1490 aaPredicted RBP30.12■■■□□ 2.41
LRRK1-208ENST00000532029 RALBP1Q15311 655 aa30.11■■■□□ 2.41
LRRK1-208ENST00000532029 CARD10Q9BWT7 1032 aa30.11■■■□□ 2.41
LRRK1-208ENST00000532029 TCP11L2Q8N4U5 519 aa30.1■■■□□ 2.41
LRRK1-208ENST00000532029 PPP2R1AP30153 589 aa30.09■■■□□ 2.41
LRRK1-208ENST00000532029 FAM208AQ9UK61 1670 aaKnown RBP30.09■■■□□ 2.41
LRRK1-208ENST00000532029 THRAP3Q9Y2W1 955 aaKnown RBP30.08■■■□□ 2.41
LRRK1-208ENST00000532029 FAM98CQ17RN3 349 aaKnown RBP30.07■■■□□ 2.4
LRRK1-208ENST00000532029 A0A0G2JS52 829 aa30.06■■■□□ 2.4
LRRK1-208ENST00000532029 MYT1Q01538 1121 aa30.06■■■□□ 2.4
LRRK1-208ENST00000532029 EIF4A2Q14240 407 aaKnown RBP30.04■■■□□ 2.4
LRRK1-208ENST00000532029 BARGINQ6ZT62 677 aa30.04■■■□□ 2.4
LRRK1-208ENST00000532029 CFAP53Q96M91 514 aa30.03■■■□□ 2.4
LRRK1-208ENST00000532029 RGS12O14924 1447 aa30.02■■■□□ 2.4
LRRK1-208ENST00000532029 ONECUT3O60422 494 aaPredicted RBP30.01■■■□□ 2.39
LRRK1-208ENST00000532029 NBPF6Q5VWK0 638 aa30.01■■■□□ 2.39
LRRK1-208ENST00000532029 NBPF4Q96M43 638 aa30.01■■■□□ 2.39
LRRK1-208ENST00000532029 PRKRIP1Q9H875 184 aaPredicted RBP30.01■■■□□ 2.39
LRRK1-208ENST00000532029 SEPT12Q8IYM1 358 aa30■■■□□ 2.39
LRRK1-208ENST00000532029 MYBBP1AQ9BQG0 1328 aaKnown RBP29.98■■■□□ 2.39
LRRK1-208ENST00000532029 CDCA7Q9BWT1 371 aaPredicted RBP29.98■■■□□ 2.39
LRRK1-208ENST00000532029 RGPD2P0DJD1 1756 aa29.98■■■□□ 2.39
LRRK1-208ENST00000532029 DIAPH1O60610 1272 aaKnown RBP29.97■■■□□ 2.39
LRRK1-208ENST00000532029 USHBP1Q8N6Y0 703 aa29.97■■■□□ 2.39
LRRK1-208ENST00000532029 EYA1Q99502 592 aa29.97■■■□□ 2.39
LRRK1-208ENST00000532029 ANP32CO43423 234 aa29.96■■■□□ 2.39
LRRK1-208ENST00000532029 THSD7AQ9UPZ6 1657 aa29.95■■■□□ 2.39
LRRK1-208ENST00000532029 IL13P35225 146 aa29.95■■■□□ 2.39
LRRK1-208ENST00000532029 IL2RBP14784 551 aa29.94■■■□□ 2.38
LRRK1-208ENST00000532029 WNK3Q9BYP7 1800 aa29.94■■■□□ 2.38
LRRK1-208ENST00000532029 COL3A1P02461 1466 aaPredicted RBP29.93■■■□□ 2.38
LRRK1-208ENST00000532029 DISP2A7MBM2 1401 aa29.93■■■□□ 2.38
LRRK1-208ENST00000532029 IGSF1Q8N6C5 1336 aa29.92■■■□□ 2.38
LRRK1-208ENST00000532029 RAPGEF4Q8WZA2 1011 aa29.91■■■□□ 2.38
LRRK1-208ENST00000532029 NCAPD2Q15021 1401 aa29.9■■■□□ 2.38
LRRK1-208ENST00000532029 PARP4Q9UKK3 1724 aaKnown RBP29.89■■■□□ 2.38
LRRK1-208ENST00000532029 DDB1Q16531 1140 aa29.89■■■□□ 2.38
LRRK1-208ENST00000532029 NUDCQ9Y266 331 aa29.89■■■□□ 2.38
LRRK1-208ENST00000532029 TATP17735 454 aaPredicted RBP29.88■■■□□ 2.37
LRRK1-208ENST00000532029 PDE3BQ13370 1112 aa29.88■■■□□ 2.37
LRRK1-208ENST00000532029 U2SURPO15042 1029 aaKnown RBP29.87■■■□□ 2.37
LRRK1-208ENST00000532029 EXOC5O00471 708 aa29.86■■■□□ 2.37
LRRK1-208ENST00000532029 KRT27Q7Z3Y8 459 aa29.86■■■□□ 2.37
LRRK1-208ENST00000532029 LRRC37A3O60309 1634 aa29.85■■■□□ 2.37
LRRK1-208ENST00000532029 SULT6B1Q6IMI4 303 aa29.85■■■□□ 2.37
LRRK1-208ENST00000532029 MEGF6O75095 1541 aa29.85■■■□□ 2.37
LRRK1-208ENST00000532029 RGPD1P0DJD0 1748 aa29.85■■■□□ 2.37
LRRK1-208ENST00000532029 BRWD3Q6RI45 1802 aa29.84■■■□□ 2.37
LRRK1-208ENST00000532029 OVOS2A0A0G2JMS6 1433 aa29.82■■■□□ 2.36
LRRK1-208ENST00000532029 TNS2Q63HR2 1409 aa29.82■■■□□ 2.36
LRRK1-208ENST00000532029 AEBP1Q8IUX7 1158 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms