RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 EVA1CP58658 441 aa16.06■□□□□ 0.16
PPFIA1-220ENST00000532024 FLT4P35916 1363 aa16.05■□□□□ 0.16
PPFIA1-220ENST00000532024 CNGB1Q14028 1251 aaPredicted RBP16.05■□□□□ 0.16
PPFIA1-220ENST00000532024 TRPC5Q9UL62 973 aaPredicted RBP16.05■□□□□ 0.16
PPFIA1-220ENST00000532024 NRAPQ86VF7 1730 aa16.05■□□□□ 0.16
PPFIA1-220ENST00000532024 BCL9LQ86UU0 1499 aa16.04■□□□□ 0.16
PPFIA1-220ENST00000532024 SMG6Q86US8 1419 aaKnown RBP16.04■□□□□ 0.16
PPFIA1-220ENST00000532024 RRS1Q15050 365 aaKnown RBP16.04■□□□□ 0.16
PPFIA1-220ENST00000532024 IP6K1Q92551 441 aa16.04■□□□□ 0.16
PPFIA1-220ENST00000532024 CCDC9Q9Y3X0 531 aaKnown RBP16.04■□□□□ 0.16
PPFIA1-220ENST00000532024 CAMTA1Q9Y6Y1 1673 aa16.04■□□□□ 0.16
PPFIA1-220ENST00000532024 COL5A2P05997 1499 aaPredicted RBP16.03■□□□□ 0.16
PPFIA1-220ENST00000532024 COL18A1P39060 1754 aa16.03■□□□□ 0.16
PPFIA1-220ENST00000532024 PPM1GO15355 546 aaPredicted RBP16.03■□□□□ 0.16
PPFIA1-220ENST00000532024 STRN4Q9NRL3 753 aa16.03■□□□□ 0.16
PPFIA1-220ENST00000532024 CSB-PGBD3P0DP91 1061 aa16.02■□□□□ 0.16
PPFIA1-220ENST00000532024 HOXC9P31274 260 aa16.02■□□□□ 0.16
PPFIA1-220ENST00000532024 VPS72Q15906 364 aa16.02■□□□□ 0.16
PPFIA1-220ENST00000532024 QTRT2Q9H974 415 aaKnown RBP16.02■□□□□ 0.16
PPFIA1-220ENST00000532024 ATRNO75882 1429 aa16.02■□□□□ 0.15
PPFIA1-220ENST00000532024 FAM208AQ9UK61 1670 aaKnown RBP16.02■□□□□ 0.15
PPFIA1-220ENST00000532024 MAP2P11137 1827 aaKnown RBP16.01■□□□□ 0.15
PPFIA1-220ENST00000532024 RGS17Q9UGC6 210 aaPredicted RBP16.01■□□□□ 0.15
PPFIA1-220ENST00000532024 EMILIN1Q9Y6C2 1016 aa16.01■□□□□ 0.15
PPFIA1-220ENST00000532024 CDK12Q9NYV4 1490 aaPredicted RBP16.01■□□□□ 0.15
PPFIA1-220ENST00000532024 INSRP06213 1382 aa16■□□□□ 0.15
PPFIA1-220ENST00000532024 WDR17Q8IZU2 1322 aa16■□□□□ 0.15
PPFIA1-220ENST00000532024 FBLN1P23142 703 aa16■□□□□ 0.15
PPFIA1-220ENST00000532024 POLKQ9UBT6 870 aa16■□□□□ 0.15
PPFIA1-220ENST00000532024 CRB1P82279 1406 aa16■□□□□ 0.15
PPFIA1-220ENST00000532024 ERBB3P21860 1342 aa15.99■□□□□ 0.15
PPFIA1-220ENST00000532024 RALBP1Q15311 655 aa15.99■□□□□ 0.15
PPFIA1-220ENST00000532024 TOM1L2Q6ZVM7 507 aa15.99■□□□□ 0.15
PPFIA1-220ENST00000532024 ANKRD24Q8TF21 1146 aa15.99■□□□□ 0.15
PPFIA1-220ENST00000532024 AXIN2Q9Y2T1 843 aa15.99■□□□□ 0.15
PPFIA1-220ENST00000532024 RGPD5Q99666 1765 aa15.99■□□□□ 0.15
PPFIA1-220ENST00000532024 PEAK1Q9H792 1746 aa15.99■□□□□ 0.15
PPFIA1-220ENST00000532024 PARD3Q8TEW0 1356 aa15.99■□□□□ 0.15
PPFIA1-220ENST00000532024 RXRBP28702 533 aa15.98■□□□□ 0.15
PPFIA1-220ENST00000532024 RBM6P78332 1123 aaKnown RBP15.98■□□□□ 0.15
PPFIA1-220ENST00000532024 GJD4Q96KN9 370 aaPredicted RBP15.97■□□□□ 0.15
PPFIA1-220ENST00000532024 CFAP53Q96M91 514 aa15.97■□□□□ 0.15
PPFIA1-220ENST00000532024 SPATA31A5Q5VU36 1347 aa15.96■□□□□ 0.15
PPFIA1-220ENST00000532024 SPATA31A7Q8IWB4 1347 aa15.96■□□□□ 0.15
PPFIA1-220ENST00000532024 LARP1Q6PKG0 1096 aaKnown RBP15.96■□□□□ 0.15
PPFIA1-220ENST00000532024 LTV1Q96GA3 475 aaPredicted RBP15.96■□□□□ 0.15
PPFIA1-220ENST00000532024 NLRP2Q9NX02 1062 aa15.96■□□□□ 0.15
PPFIA1-220ENST00000532024 MTHFSP49914 203 aa15.95■□□□□ 0.14
PPFIA1-220ENST00000532024 HSP90AB2PQ58FF8 381 aa15.95■□□□□ 0.14
PPFIA1-220ENST00000532024 POTEAQ6S8J7 498 aa15.95■□□□□ 0.14
PPFIA1-220ENST00000532024 THRAP3Q9Y2W1 955 aaKnown RBP15.95■□□□□ 0.14
PPFIA1-220ENST00000532024 SPATA31A1Q5TZJ5 1347 aa15.94■□□□□ 0.14
PPFIA1-220ENST00000532024 PPP2R1AP30153 589 aa15.94■□□□□ 0.14
PPFIA1-220ENST00000532024 TCP11L2Q8N4U5 519 aa15.94■□□□□ 0.14
PPFIA1-220ENST00000532024 CARD10Q9BWT7 1032 aa15.94■□□□□ 0.14
PPFIA1-220ENST00000532024 USP35Q9P2H5 1018 aa15.94■□□□□ 0.14
PPFIA1-220ENST00000532024 GLI3P10071 1580 aa15.93■□□□□ 0.14
PPFIA1-220ENST00000532024 A0A0G2JS52 829 aa15.93■□□□□ 0.14
PPFIA1-220ENST00000532024 ANP32CO43423 234 aa15.93■□□□□ 0.14
PPFIA1-220ENST00000532024 MYT1Q01538 1121 aa15.93■□□□□ 0.14
PPFIA1-220ENST00000532024 MYBBP1AQ9BQG0 1328 aaKnown RBP15.93■□□□□ 0.14
PPFIA1-220ENST00000532024 CDCA7Q9BWT1 371 aaPredicted RBP15.92■□□□□ 0.14
PPFIA1-220ENST00000532024 PRKRIP1Q9H875 184 aaPredicted RBP15.91■□□□□ 0.14
PPFIA1-220ENST00000532024 EIF4A2Q14240 407 aaKnown RBP15.9■□□□□ 0.14
PPFIA1-220ENST00000532024 FAM98CQ17RN3 349 aaKnown RBP15.9■□□□□ 0.14
PPFIA1-220ENST00000532024 BARGINQ6ZT62 677 aa15.9■□□□□ 0.14
PPFIA1-220ENST00000532024 DIAPH1O60610 1272 aaKnown RBP15.89■□□□□ 0.13
PPFIA1-220ENST00000532024 NUDCQ9Y266 331 aa15.88■□□□□ 0.13
PPFIA1-220ENST00000532024 WNK3Q9BYP7 1800 aa15.88■□□□□ 0.13
PPFIA1-220ENST00000532024 RGS12O14924 1447 aa15.87■□□□□ 0.13
PPFIA1-220ENST00000532024 THSD7AQ9UPZ6 1657 aa15.87■□□□□ 0.13
PPFIA1-220ENST00000532024 RAPGEF4Q8WZA2 1011 aa15.87■□□□□ 0.13
PPFIA1-220ENST00000532024 COL3A1P02461 1466 aaPredicted RBP15.86■□□□□ 0.13
PPFIA1-220ENST00000532024 PARP4Q9UKK3 1724 aaKnown RBP15.86■□□□□ 0.13
PPFIA1-220ENST00000532024 ONECUT3O60422 494 aaPredicted RBP15.86■□□□□ 0.13
PPFIA1-220ENST00000532024 IL2RBP14784 551 aa15.86■□□□□ 0.13
PPFIA1-220ENST00000532024 NBPF6Q5VWK0 638 aa15.86■□□□□ 0.13
PPFIA1-220ENST00000532024 NBPF4Q96M43 638 aa15.86■□□□□ 0.13
PPFIA1-220ENST00000532024 RGPD2P0DJD1 1756 aa15.85■□□□□ 0.13
PPFIA1-220ENST00000532024 SEPT12Q8IYM1 358 aa15.85■□□□□ 0.13
PPFIA1-220ENST00000532024 EYA1Q99502 592 aa15.85■□□□□ 0.13
PPFIA1-220ENST00000532024 IGSF1Q8N6C5 1336 aa15.85■□□□□ 0.13
PPFIA1-220ENST00000532024 PLEKHG2Q9H7P9 1386 aa15.85■□□□□ 0.13
PPFIA1-220ENST00000532024 NCAPD2Q15021 1401 aa15.85■□□□□ 0.13
PPFIA1-220ENST00000532024 U2SURPO15042 1029 aaKnown RBP15.84■□□□□ 0.13
PPFIA1-220ENST00000532024 TATP17735 454 aaPredicted RBP15.84■□□□□ 0.13
PPFIA1-220ENST00000532024 IL13P35225 146 aa15.84■□□□□ 0.13
PPFIA1-220ENST00000532024 USHBP1Q8N6Y0 703 aa15.84■□□□□ 0.13
PPFIA1-220ENST00000532024 DISP2A7MBM2 1401 aa15.84■□□□□ 0.13
PPFIA1-220ENST00000532024 RGPD1P0DJD0 1748 aa15.83■□□□□ 0.13
PPFIA1-220ENST00000532024 PDE3BQ13370 1112 aa15.83■□□□□ 0.12
PPFIA1-220ENST00000532024 DDB1Q16531 1140 aa15.83■□□□□ 0.12
PPFIA1-220ENST00000532024 LRRC37A3O60309 1634 aa15.83■□□□□ 0.12
PPFIA1-220ENST00000532024 OVOS2A0A0G2JMS6 1433 aa15.82■□□□□ 0.12
PPFIA1-220ENST00000532024 TNS2Q63HR2 1409 aa15.82■□□□□ 0.12
PPFIA1-220ENST00000532024 EXOC5O00471 708 aa15.81■□□□□ 0.12
PPFIA1-220ENST00000532024 DIEXFQ68CQ4 756 aaKnown RBP15.81■□□□□ 0.12
PPFIA1-220ENST00000532024 MEGF6O75095 1541 aa15.8■□□□□ 0.12
PPFIA1-220ENST00000532024 KDRP35968 1356 aa15.8■□□□□ 0.12
PPFIA1-220ENST00000532024 SULT6B1Q6IMI4 303 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms