RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 RGPD5Q99666 1765 aa34.47■■■■□ 3.11
NKX2-1-204ENST00000522719 ZBTB7CA1YPR0 619 aa34.47■■■■□ 3.11
NKX2-1-204ENST00000522719 MRS2Q9HD23 443 aa34.47■■■■□ 3.11
NKX2-1-204ENST00000522719 NUTM2BA6NNL0 878 aaPredicted RBP34.47■■■■□ 3.11
NKX2-1-204ENST00000522719 NUTM2EB1AL46 878 aaPredicted RBP34.47■■■■□ 3.11
NKX2-1-204ENST00000522719 NUTM2AQ8IVF1 878 aaPredicted RBP34.47■■■■□ 3.11
NKX2-1-204ENST00000522719 BLMP54132 1417 aaPredicted RBP34.46■■■■□ 3.11
NKX2-1-204ENST00000522719 COL3A1P02461 1466 aaPredicted RBP34.46■■■■□ 3.11
NKX2-1-204ENST00000522719 LMO7Q8WWI1 1683 aa34.45■■■■□ 3.11
NKX2-1-204ENST00000522719 CCDC184Q52MB2 194 aa34.45■■■■□ 3.11
NKX2-1-204ENST00000522719 HSP90AB2PQ58FF8 381 aa34.44■■■■□ 3.1
NKX2-1-204ENST00000522719 FAM83GA6ND36 823 aa34.42■■■■□ 3.1
NKX2-1-204ENST00000522719 CHRNA2Q15822 529 aa34.42■■■■□ 3.1
NKX2-1-204ENST00000522719 DIAPH1O60610 1272 aaKnown RBP34.4■■■■□ 3.1
NKX2-1-204ENST00000522719 ADAMTS2O95450 1211 aa34.4■■■■□ 3.1
NKX2-1-204ENST00000522719 AXIN2Q9Y2T1 843 aa34.39■■■■□ 3.1
NKX2-1-204ENST00000522719 LRP6O75581 1613 aa34.39■■■■□ 3.1
NKX2-1-204ENST00000522719 NUDCQ9Y266 331 aa34.37■■■■□ 3.09
NKX2-1-204ENST00000522719 PLCH1Q4KWH8 1693 aa34.37■■■■□ 3.09
NKX2-1-204ENST00000522719 CAMTA1Q9Y6Y1 1673 aa34.37■■■■□ 3.09
NKX2-1-204ENST00000522719 EIF4A2Q14240 407 aaKnown RBP34.36■■■■□ 3.09
NKX2-1-204ENST00000522719 NWD2Q9ULI1 1742 aa34.35■■■■□ 3.09
NKX2-1-204ENST00000522719 IL13P35225 146 aa34.35■■■■□ 3.09
NKX2-1-204ENST00000522719 FAM208AQ9UK61 1670 aaKnown RBP34.34■■■■□ 3.09
NKX2-1-204ENST00000522719 PNISRQ8TF01 805 aaKnown RBP34.33■■■■□ 3.09
NKX2-1-204ENST00000522719 ERBB3P21860 1342 aa34.32■■■■□ 3.08
NKX2-1-204ENST00000522719 ANKRD24Q8TF21 1146 aa34.31■■■■□ 3.08
NKX2-1-204ENST00000522719 RGPD1P0DJD0 1748 aa34.3■■■■□ 3.08
NKX2-1-204ENST00000522719 COL5A2P05997 1499 aaPredicted RBP34.3■■■■□ 3.08
NKX2-1-204ENST00000522719 BTG4Q9NY30 223 aa34.3■■■■□ 3.08
NKX2-1-204ENST00000522719 SLIT2O94813 1529 aa34.29■■■■□ 3.08
NKX2-1-204ENST00000522719 WDR43Q15061 677 aaKnown RBP eCLIP34.29■■■■□ 3.08
NKX2-1-204ENST00000522719 MEX3CQ5U5Q3 659 aaKnown RBP34.29■■■■□ 3.08
NKX2-1-204ENST00000522719 LTV1Q96GA3 475 aaPredicted RBP34.29■■■■□ 3.08
NKX2-1-204ENST00000522719 RGPD2P0DJD1 1756 aa34.28■■■■□ 3.08
NKX2-1-204ENST00000522719 C8orf37Q96NL8 207 aa34.27■■■■□ 3.08
NKX2-1-204ENST00000522719 NRAPQ86VF7 1730 aa34.26■■■■□ 3.08
NKX2-1-204ENST00000522719 NGLY1Q96IV0 654 aa34.26■■■■□ 3.07
NKX2-1-204ENST00000522719 U2SURPO15042 1029 aaKnown RBP34.25■■■■□ 3.07
NKX2-1-204ENST00000522719 EVA1CP58658 441 aa34.24■■■■□ 3.07
NKX2-1-204ENST00000522719 WDR17Q8IZU2 1322 aa34.24■■■■□ 3.07
NKX2-1-204ENST00000522719 CSB-PGBD3P0DP91 1061 aa34.23■■■■□ 3.07
NKX2-1-204ENST00000522719 FNBP4Q8N3X1 1017 aaPredicted RBP34.23■■■■□ 3.07
NKX2-1-204ENST00000522719 U2AF1L5P0DN76 240 aaPredicted RBP34.22■■■■□ 3.07
NKX2-1-204ENST00000522719 U2AF1Q01081 240 aaKnown RBP eCLIP34.22■■■■□ 3.07
NKX2-1-204ENST00000522719 IGSF1Q8N6C5 1336 aa34.22■■■■□ 3.07
NKX2-1-204ENST00000522719 EYA1Q99502 592 aa34.22■■■■□ 3.07
NKX2-1-204ENST00000522719 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.21■■■■□ 3.07
NKX2-1-204ENST00000522719 FAM9BQ8IZU0 186 aa34.2■■■■□ 3.06
NKX2-1-204ENST00000522719 STRN4Q9NRL3 753 aa34.2■■■■□ 3.06
NKX2-1-204ENST00000522719 ADAMTS8Q9UP79 889 aa34.2■■■■□ 3.06
NKX2-1-204ENST00000522719 NBPF6Q5VWK0 638 aa34.19■■■■□ 3.06
NKX2-1-204ENST00000522719 NBPF4Q96M43 638 aa34.19■■■■□ 3.06
NKX2-1-204ENST00000522719 NCAPD2Q15021 1401 aa34.18■■■■□ 3.06
NKX2-1-204ENST00000522719 UNC5CLQ8IV45 518 aa34.17■■■■□ 3.06
NKX2-1-204ENST00000522719 NLRP2Q9NX02 1062 aa34.17■■■■□ 3.06
NKX2-1-204ENST00000522719 CRB1P82279 1406 aa34.17■■■■□ 3.06
NKX2-1-204ENST00000522719 BCL9LQ86UU0 1499 aa34.16■■■■□ 3.06
NKX2-1-204ENST00000522719 FCHSD2O94868 740 aa34.16■■■■□ 3.06
NKX2-1-204ENST00000522719 TOM1L2Q6ZVM7 507 aa34.16■■■■□ 3.06
NKX2-1-204ENST00000522719 KDRP35968 1356 aa34.16■■■■□ 3.06
NKX2-1-204ENST00000522719 LARP1Q6PKG0 1096 aaKnown RBP34.15■■■■□ 3.06
NKX2-1-204ENST00000522719 PNNQ9H307 717 aaKnown RBP34.14■■■■□ 3.06
NKX2-1-204ENST00000522719 SULT6B1Q6IMI4 303 aa34.13■■■■□ 3.05
NKX2-1-204ENST00000522719 CARD10Q9BWT7 1032 aa34.13■■■■□ 3.05
NKX2-1-204ENST00000522719 USP21Q9UK80 565 aa34.13■■■■□ 3.05
NKX2-1-204ENST00000522719 AFF2P51816 1311 aa34.12■■■■□ 3.05
NKX2-1-204ENST00000522719 HMOX1P09601 288 aa34.12■■■■□ 3.05
NKX2-1-204ENST00000522719 RSPH6AQ9H0K4 717 aa34.11■■■■□ 3.05
NKX2-1-204ENST00000522719 ILDR2Q71H61 639 aa34.1■■■■□ 3.05
NKX2-1-204ENST00000522719 SOCS7O14512 581 aa34.09■■■■□ 3.05
NKX2-1-204ENST00000522719 AEBP1Q8IUX7 1158 aa34.09■■■■□ 3.05
NKX2-1-204ENST00000522719 USHBP1Q8N6Y0 703 aa34.08■■■■□ 3.05
NKX2-1-204ENST00000522719 VPS72Q15906 364 aa34.07■■■■□ 3.04
NKX2-1-204ENST00000522719 PRKAR2BP31323 418 aa34.04■■■■□ 3.04
NKX2-1-204ENST00000522719 SPATA31A5Q5VU36 1347 aa34.04■■■■□ 3.04
NKX2-1-204ENST00000522719 SPATA31A7Q8IWB4 1347 aa34.04■■■■□ 3.04
NKX2-1-204ENST00000522719 RUNDC1Q96C34 613 aa34.04■■■■□ 3.04
NKX2-1-204ENST00000522719 PLEKHF1Q96S99 279 aa34.04■■■■□ 3.04
NKX2-1-204ENST00000522719 SPATA31A1Q5TZJ5 1347 aa34.03■■■■□ 3.04
NKX2-1-204ENST00000522719 PLEKHG2Q9H7P9 1386 aa34.03■■■■□ 3.04
NKX2-1-204ENST00000522719 NEFMP07197 916 aa34.03■■■■□ 3.04
NKX2-1-204ENST00000522719 THRAP3Q9Y2W1 955 aaKnown RBP34.03■■■■□ 3.04
NKX2-1-204ENST00000522719 TCP11L2Q8N4U5 519 aa34.01■■■■□ 3.03
NKX2-1-204ENST00000522719 PARP4Q9UKK3 1724 aaKnown RBP34.01■■■■□ 3.03
NKX2-1-204ENST00000522719 WNK3Q9BYP7 1800 aa34■■■■□ 3.03
NKX2-1-204ENST00000522719 RAPGEF4Q8WZA2 1011 aa34■■■■□ 3.03
NKX2-1-204ENST00000522719 TRPC5Q9UL62 973 aaPredicted RBP34■■■■□ 3.03
NKX2-1-204ENST00000522719 ATRNO75882 1429 aa33.99■■■■□ 3.03
NKX2-1-204ENST00000522719 MAPK8IP3Q9UPT6 1336 aa33.99■■■■□ 3.03
NKX2-1-204ENST00000522719 ZNF772Q68DY9 489 aaPredicted RBP33.99■■■■□ 3.03
NKX2-1-204ENST00000522719 CCDC146Q8IYE0 955 aa33.99■■■■□ 3.03
NKX2-1-204ENST00000522719 USP35Q9P2H5 1018 aa33.99■■■■□ 3.03
NKX2-1-204ENST00000522719 CCDC9Q9Y3X0 531 aaKnown RBP33.99■■■■□ 3.03
NKX2-1-204ENST00000522719 IL2RBP14784 551 aa33.96■■■■□ 3.03
NKX2-1-204ENST00000522719 TATP17735 454 aaPredicted RBP33.96■■■■□ 3.03
NKX2-1-204ENST00000522719 MEGF6O75095 1541 aa33.95■■■■□ 3.02
NKX2-1-204ENST00000522719 BARGINQ6ZT62 677 aa33.95■■■■□ 3.02
NKX2-1-204ENST00000522719 CDCA7Q9BWT1 371 aaPredicted RBP33.95■■■■□ 3.02
NKX2-1-204ENST00000522719 PHACTR3Q96KR7 559 aa33.94■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms