RNA–Protein interactions for RNA: ENST00000518951.6

TOP1MT-206, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 5

Gene TOP1MT, Length 1,461 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-206ENST00000518951 NRAPQ86VF7 1730 aa28.5■■■□□ 2.15
TOP1MT-206ENST00000518951 AMPHP49418 695 aa28.48■■■□□ 2.15
TOP1MT-206ENST00000518951 IP6K1Q92551 441 aa28.48■■■□□ 2.15
TOP1MT-206ENST00000518951 BCL9LQ86UU0 1499 aa28.48■■■□□ 2.15
TOP1MT-206ENST00000518951 HOXC9P31274 260 aa28.47■■■□□ 2.15
TOP1MT-206ENST00000518951 ABCC6O95255 1503 aa28.47■■■□□ 2.15
TOP1MT-206ENST00000518951 PPM1GO15355 546 aaPredicted RBP28.46■■■□□ 2.15
TOP1MT-206ENST00000518951 SMG6Q86US8 1419 aaKnown RBP28.46■■■□□ 2.15
TOP1MT-206ENST00000518951 PRKRIP1Q9H875 184 aaPredicted RBP28.46■■■□□ 2.15
TOP1MT-206ENST00000518951 PPP2R1AP30153 589 aa28.45■■■□□ 2.14
TOP1MT-206ENST00000518951 MTHFSP49914 203 aa28.44■■■□□ 2.14
TOP1MT-206ENST00000518951 RALBP1Q15311 655 aa28.44■■■□□ 2.14
TOP1MT-206ENST00000518951 HSP90AB2PQ58FF8 381 aa28.44■■■□□ 2.14
TOP1MT-206ENST00000518951 USP21Q9UK80 565 aa28.44■■■□□ 2.14
TOP1MT-206ENST00000518951 RTL1A6NKG5 1358 aa28.44■■■□□ 2.14
TOP1MT-206ENST00000518951 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.44■■■□□ 2.14
TOP1MT-206ENST00000518951 COL5A2P05997 1499 aaPredicted RBP28.43■■■□□ 2.14
TOP1MT-206ENST00000518951 FLT4P35916 1363 aa28.43■■■□□ 2.14
TOP1MT-206ENST00000518951 KIF24Q5T7B8 1368 aa28.43■■■□□ 2.14
TOP1MT-206ENST00000518951 RGS17Q9UGC6 210 aaPredicted RBP28.43■■■□□ 2.14
TOP1MT-206ENST00000518951 UNC5CLQ8IV45 518 aa28.42■■■□□ 2.14
TOP1MT-206ENST00000518951 BLMP54132 1417 aaPredicted RBP28.41■■■□□ 2.14
TOP1MT-206ENST00000518951 STRN4Q9NRL3 753 aa28.4■■■□□ 2.14
TOP1MT-206ENST00000518951 INSRP06213 1382 aa28.39■■■□□ 2.14
TOP1MT-206ENST00000518951 CDK12Q9NYV4 1490 aaPredicted RBP28.39■■■□□ 2.13
TOP1MT-206ENST00000518951 RGPD2P0DJD1 1756 aa28.38■■■□□ 2.13
TOP1MT-206ENST00000518951 ANKRD24Q8TF21 1146 aa28.38■■■□□ 2.13
TOP1MT-206ENST00000518951 LTV1Q96GA3 475 aaPredicted RBP28.38■■■□□ 2.13
TOP1MT-206ENST00000518951 ERBB3P21860 1342 aa28.37■■■□□ 2.13
TOP1MT-206ENST00000518951 EVA1CP58658 441 aa28.37■■■□□ 2.13
TOP1MT-206ENST00000518951 LARP1Q6PKG0 1096 aaKnown RBP28.37■■■□□ 2.13
TOP1MT-206ENST00000518951 PHF23Q9BUL5 403 aaPredicted RBP28.36■■■□□ 2.13
TOP1MT-206ENST00000518951 MYBBP1AQ9BQG0 1328 aaKnown RBP28.35■■■□□ 2.13
TOP1MT-206ENST00000518951 ANP32CO43423 234 aa28.34■■■□□ 2.13
TOP1MT-206ENST00000518951 WDR17Q8IZU2 1322 aa28.34■■■□□ 2.13
TOP1MT-206ENST00000518951 ATRNO75882 1429 aa28.34■■■□□ 2.13
TOP1MT-206ENST00000518951 DIEXFQ68CQ4 756 aaKnown RBP28.34■■■□□ 2.13
TOP1MT-206ENST00000518951 ZNF772Q68DY9 489 aaPredicted RBP28.34■■■□□ 2.13
TOP1MT-206ENST00000518951 VPS72Q15906 364 aa28.33■■■□□ 2.13
TOP1MT-206ENST00000518951 QTRT2Q9H974 415 aaKnown RBP28.33■■■□□ 2.13
TOP1MT-206ENST00000518951 COL3A1P02461 1466 aaPredicted RBP28.32■■■□□ 2.12
TOP1MT-206ENST00000518951 EIF4A2Q14240 407 aaKnown RBP28.32■■■□□ 2.12
TOP1MT-206ENST00000518951 CSB-PGBD3P0DP91 1061 aa28.31■■■□□ 2.12
TOP1MT-206ENST00000518951 TRPC5Q9UL62 973 aaPredicted RBP28.31■■■□□ 2.12
TOP1MT-206ENST00000518951 FAM208AQ9UK61 1670 aaKnown RBP28.31■■■□□ 2.12
TOP1MT-206ENST00000518951 POTEAQ6S8J7 498 aa28.3■■■□□ 2.12
TOP1MT-206ENST00000518951 TOM1L2Q6ZVM7 507 aa28.29■■■□□ 2.12
TOP1MT-206ENST00000518951 CRB1P82279 1406 aa28.29■■■□□ 2.12
TOP1MT-206ENST00000518951 GLI3P10071 1580 aa28.28■■■□□ 2.12
TOP1MT-206ENST00000518951 SPATA31A5Q5VU36 1347 aa28.28■■■□□ 2.12
TOP1MT-206ENST00000518951 SPATA31A7Q8IWB4 1347 aa28.28■■■□□ 2.12
TOP1MT-206ENST00000518951 CCDC9Q9Y3X0 531 aaKnown RBP28.27■■■□□ 2.12
TOP1MT-206ENST00000518951 IL13P35225 146 aa28.27■■■□□ 2.12
TOP1MT-206ENST00000518951 NBPF6Q5VWK0 638 aa28.27■■■□□ 2.12
TOP1MT-206ENST00000518951 NBPF4Q96M43 638 aa28.27■■■□□ 2.12
TOP1MT-206ENST00000518951 NLRP2Q9NX02 1062 aa28.27■■■□□ 2.12
TOP1MT-206ENST00000518951 SPATA31A1Q5TZJ5 1347 aa28.26■■■□□ 2.12
TOP1MT-206ENST00000518951 GJD4Q96KN9 370 aaPredicted RBP28.26■■■□□ 2.11
TOP1MT-206ENST00000518951 USP35Q9P2H5 1018 aa28.26■■■□□ 2.11
TOP1MT-206ENST00000518951 EYA1Q99502 592 aa28.24■■■□□ 2.11
TOP1MT-206ENST00000518951 CARD10Q9BWT7 1032 aa28.24■■■□□ 2.11
TOP1MT-206ENST00000518951 RGPD1P0DJD0 1748 aa28.24■■■□□ 2.11
TOP1MT-206ENST00000518951 DIAPH1O60610 1272 aaKnown RBP28.23■■■□□ 2.11
TOP1MT-206ENST00000518951 CFAP53Q96M91 514 aa28.23■■■□□ 2.11
TOP1MT-206ENST00000518951 CCDC184Q52MB2 194 aa28.22■■■□□ 2.11
TOP1MT-206ENST00000518951 USHBP1Q8N6Y0 703 aa28.22■■■□□ 2.11
TOP1MT-206ENST00000518951 TCP11L2Q8N4U5 519 aa28.2■■■□□ 2.1
TOP1MT-206ENST00000518951 WNK3Q9BYP7 1800 aa28.2■■■□□ 2.1
TOP1MT-206ENST00000518951 RBM6P78332 1123 aaKnown RBP28.19■■■□□ 2.1
TOP1MT-206ENST00000518951 NCAPD2Q15021 1401 aa28.18■■■□□ 2.1
TOP1MT-206ENST00000518951 IGSF1Q8N6C5 1336 aa28.18■■■□□ 2.1
TOP1MT-206ENST00000518951 RXRBP28702 533 aa28.16■■■□□ 2.1
TOP1MT-206ENST00000518951 FAM98CQ17RN3 349 aaKnown RBP28.16■■■□□ 2.1
TOP1MT-206ENST00000518951 THRAP3Q9Y2W1 955 aaKnown RBP28.15■■■□□ 2.1
TOP1MT-206ENST00000518951 BARGINQ6ZT62 677 aa28.15■■■□□ 2.1
TOP1MT-206ENST00000518951 U2SURPO15042 1029 aaKnown RBP28.14■■■□□ 2.09
TOP1MT-206ENST00000518951 AEBP1Q8IUX7 1158 aa28.14■■■□□ 2.09
TOP1MT-206ENST00000518951 DISP2A7MBM2 1401 aa28.13■■■□□ 2.09
TOP1MT-206ENST00000518951 THSD7AQ9UPZ6 1657 aa28.13■■■□□ 2.09
TOP1MT-206ENST00000518951 ONECUT3O60422 494 aaPredicted RBP28.13■■■□□ 2.09
TOP1MT-206ENST00000518951 MIER1Q8N108 512 aa28.13■■■□□ 2.09
TOP1MT-206ENST00000518951 SULT6B1Q6IMI4 303 aa28.11■■■□□ 2.09
TOP1MT-206ENST00000518951 MEGF6O75095 1541 aa28.11■■■□□ 2.09
TOP1MT-206ENST00000518951 HMOX1P09601 288 aa28.1■■■□□ 2.09
TOP1MT-206ENST00000518951 NUDCQ9Y266 331 aa28.1■■■□□ 2.09
TOP1MT-206ENST00000518951 BRWD3Q6RI45 1802 aa28.09■■■□□ 2.09
TOP1MT-206ENST00000518951 PARP4Q9UKK3 1724 aaKnown RBP28.09■■■□□ 2.09
TOP1MT-206ENST00000518951 KDRP35968 1356 aa28.09■■■□□ 2.09
TOP1MT-206ENST00000518951 IL2RBP14784 551 aa28.08■■■□□ 2.09
TOP1MT-206ENST00000518951 MRS2Q9HD23 443 aa28.08■■■□□ 2.09
TOP1MT-206ENST00000518951 RGS12O14924 1447 aa28.07■■■□□ 2.08
TOP1MT-206ENST00000518951 U2AF1L5P0DN76 240 aaPredicted RBP28.07■■■□□ 2.08
TOP1MT-206ENST00000518951 U2AF1Q01081 240 aaKnown RBP eCLIP28.07■■■□□ 2.08
TOP1MT-206ENST00000518951 SEPT12Q8IYM1 358 aa28.07■■■□□ 2.08
TOP1MT-206ENST00000518951 LRRC37A3O60309 1634 aa28.06■■■□□ 2.08
TOP1MT-206ENST00000518951 A0A0G2JS52 829 aa28.04■■■□□ 2.08
TOP1MT-206ENST00000518951 MYT1Q01538 1121 aa28.04■■■□□ 2.08
TOP1MT-206ENST00000518951 RAPGEF4Q8WZA2 1011 aa28.04■■■□□ 2.08
TOP1MT-206ENST00000518951 CDCA7Q9BWT1 371 aaPredicted RBP28.03■■■□□ 2.08
TOP1MT-206ENST00000518951 SHANK3Q9BYB0 1731 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms