RNA–Protein interactions for RNA: ENST00000518720.5

TSNARE1-202, Transcript of t-SNARE domain containing 1, humanhuman

TSL 4

Gene TSNARE1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-202ENST00000518720 SMG6Q86US8 1419 aaKnown RBP23.22■■□□□ 1.31
TSNARE1-202ENST00000518720 ANP32CO43423 234 aa23.21■■□□□ 1.31
TSNARE1-202ENST00000518720 RALBP1Q15311 655 aa23.21■■□□□ 1.31
TSNARE1-202ENST00000518720 FLT4P35916 1363 aa23.21■■□□□ 1.31
TSNARE1-202ENST00000518720 CAMTA1Q9Y6Y1 1673 aa23.21■■□□□ 1.31
TSNARE1-202ENST00000518720 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.2■■□□□ 1.3
TSNARE1-202ENST00000518720 CDK12Q9NYV4 1490 aaPredicted RBP23.2■■□□□ 1.3
TSNARE1-202ENST00000518720 DIEXFQ68CQ4 756 aaKnown RBP23.2■■□□□ 1.3
TSNARE1-202ENST00000518720 PRKRIP1Q9H875 184 aaPredicted RBP23.2■■□□□ 1.3
TSNARE1-202ENST00000518720 POLKQ9UBT6 870 aa23.2■■□□□ 1.3
TSNARE1-202ENST00000518720 SLIT2O94813 1529 aa23.19■■□□□ 1.3
TSNARE1-202ENST00000518720 PPP2R1AP30153 589 aa23.19■■□□□ 1.3
TSNARE1-202ENST00000518720 AFF2P51816 1311 aa23.18■■□□□ 1.3
TSNARE1-202ENST00000518720 HOXC9P31274 260 aa23.18■■□□□ 1.3
TSNARE1-202ENST00000518720 BTG4Q9NY30 223 aa23.18■■□□□ 1.3
TSNARE1-202ENST00000518720 BLMP54132 1417 aaPredicted RBP23.17■■□□□ 1.3
TSNARE1-202ENST00000518720 IP6K1Q92551 441 aa23.17■■□□□ 1.3
TSNARE1-202ENST00000518720 COL5A2P05997 1499 aaPredicted RBP23.17■■□□□ 1.3
TSNARE1-202ENST00000518720 RGPD2P0DJD1 1756 aa23.17■■□□□ 1.3
TSNARE1-202ENST00000518720 KIF24Q5T7B8 1368 aa23.16■■□□□ 1.3
TSNARE1-202ENST00000518720 FAM208AQ9UK61 1670 aaKnown RBP23.16■■□□□ 1.3
TSNARE1-202ENST00000518720 MYBBP1AQ9BQG0 1328 aaKnown RBP23.16■■□□□ 1.3
TSNARE1-202ENST00000518720 MTHFSP49914 203 aa23.16■■□□□ 1.3
TSNARE1-202ENST00000518720 STRN4Q9NRL3 753 aa23.16■■□□□ 1.3
TSNARE1-202ENST00000518720 LTV1Q96GA3 475 aaPredicted RBP23.15■■□□□ 1.3
TSNARE1-202ENST00000518720 AXIN2Q9Y2T1 843 aa23.15■■□□□ 1.3
TSNARE1-202ENST00000518720 HSP90AB2PQ58FF8 381 aa23.13■■□□□ 1.29
TSNARE1-202ENST00000518720 PHF23Q9BUL5 403 aaPredicted RBP23.13■■□□□ 1.29
TSNARE1-202ENST00000518720 USP21Q9UK80 565 aa23.13■■□□□ 1.29
TSNARE1-202ENST00000518720 INSRP06213 1382 aa23.13■■□□□ 1.29
TSNARE1-202ENST00000518720 BCL9LQ86UU0 1499 aa23.12■■□□□ 1.29
TSNARE1-202ENST00000518720 CSB-PGBD3P0DP91 1061 aa23.12■■□□□ 1.29
TSNARE1-202ENST00000518720 EVA1CP58658 441 aa23.12■■□□□ 1.29
TSNARE1-202ENST00000518720 FNBP4Q8N3X1 1017 aaPredicted RBP23.12■■□□□ 1.29
TSNARE1-202ENST00000518720 ANKRD24Q8TF21 1146 aa23.11■■□□□ 1.29
TSNARE1-202ENST00000518720 COL3A1P02461 1466 aaPredicted RBP23.11■■□□□ 1.29
TSNARE1-202ENST00000518720 ERBB3P21860 1342 aa23.1■■□□□ 1.29
TSNARE1-202ENST00000518720 UNC5CLQ8IV45 518 aa23.1■■□□□ 1.29
TSNARE1-202ENST00000518720 CFAP53Q96M91 514 aa23.09■■□□□ 1.29
TSNARE1-202ENST00000518720 CCDC9Q9Y3X0 531 aaKnown RBP23.08■■□□□ 1.29
TSNARE1-202ENST00000518720 LARP1Q6PKG0 1096 aaKnown RBP23.07■■□□□ 1.28
TSNARE1-202ENST00000518720 WDR17Q8IZU2 1322 aa23.07■■□□□ 1.28
TSNARE1-202ENST00000518720 WNK3Q9BYP7 1800 aa23.06■■□□□ 1.28
TSNARE1-202ENST00000518720 EIF4A2Q14240 407 aaKnown RBP23.06■■□□□ 1.28
TSNARE1-202ENST00000518720 TOM1L2Q6ZVM7 507 aa23.06■■□□□ 1.28
TSNARE1-202ENST00000518720 ZNF772Q68DY9 489 aaPredicted RBP23.05■■□□□ 1.28
TSNARE1-202ENST00000518720 ATRNO75882 1429 aa23.05■■□□□ 1.28
TSNARE1-202ENST00000518720 CRB1P82279 1406 aa23.05■■□□□ 1.28
TSNARE1-202ENST00000518720 RGPD1P0DJD0 1748 aa23.05■■□□□ 1.28
TSNARE1-202ENST00000518720 NLRP2Q9NX02 1062 aa23.04■■□□□ 1.28
TSNARE1-202ENST00000518720 DIAPH1O60610 1272 aaKnown RBP23.03■■□□□ 1.28
TSNARE1-202ENST00000518720 USP35Q9P2H5 1018 aa23.03■■□□□ 1.28
TSNARE1-202ENST00000518720 TRPC5Q9UL62 973 aaPredicted RBP23.03■■□□□ 1.28
TSNARE1-202ENST00000518720 VPS72Q15906 364 aa23.02■■□□□ 1.28
TSNARE1-202ENST00000518720 GLI3P10071 1580 aa23.01■■□□□ 1.27
TSNARE1-202ENST00000518720 USHBP1Q8N6Y0 703 aa23■■□□□ 1.27
TSNARE1-202ENST00000518720 QTRT2Q9H974 415 aaKnown RBP23■■□□□ 1.27
TSNARE1-202ENST00000518720 RGS17Q9UGC6 210 aaPredicted RBP23■■□□□ 1.27
TSNARE1-202ENST00000518720 IL13P35225 146 aa22.99■■□□□ 1.27
TSNARE1-202ENST00000518720 SPATA31A5Q5VU36 1347 aa22.99■■□□□ 1.27
TSNARE1-202ENST00000518720 SPATA31A7Q8IWB4 1347 aa22.99■■□□□ 1.27
TSNARE1-202ENST00000518720 U2SURPO15042 1029 aaKnown RBP22.98■■□□□ 1.27
TSNARE1-202ENST00000518720 SPATA31A1Q5TZJ5 1347 aa22.98■■□□□ 1.27
TSNARE1-202ENST00000518720 PARP4Q9UKK3 1724 aaKnown RBP22.97■■□□□ 1.27
TSNARE1-202ENST00000518720 NBPF6Q5VWK0 638 aa22.97■■□□□ 1.27
TSNARE1-202ENST00000518720 NBPF4Q96M43 638 aa22.97■■□□□ 1.27
TSNARE1-202ENST00000518720 EYA1Q99502 592 aa22.97■■□□□ 1.27
TSNARE1-202ENST00000518720 CARD10Q9BWT7 1032 aa22.97■■□□□ 1.27
TSNARE1-202ENST00000518720 CCDC184Q52MB2 194 aa22.96■■□□□ 1.27
TSNARE1-202ENST00000518720 MIER1Q8N108 512 aa22.96■■□□□ 1.27
TSNARE1-202ENST00000518720 MRS2Q9HD23 443 aa22.96■■□□□ 1.27
TSNARE1-202ENST00000518720 NUDCQ9Y266 331 aa22.96■■□□□ 1.27
TSNARE1-202ENST00000518720 IGSF1Q8N6C5 1336 aa22.96■■□□□ 1.27
TSNARE1-202ENST00000518720 GJD4Q96KN9 370 aaPredicted RBP22.95■■□□□ 1.26
TSNARE1-202ENST00000518720 POTEAQ6S8J7 498 aa22.94■■□□□ 1.26
TSNARE1-202ENST00000518720 TCP11L2Q8N4U5 519 aa22.94■■□□□ 1.26
TSNARE1-202ENST00000518720 NCAPD2Q15021 1401 aa22.93■■□□□ 1.26
TSNARE1-202ENST00000518720 A0A0G2JS52 829 aa22.92■■□□□ 1.26
TSNARE1-202ENST00000518720 HMOX1P09601 288 aa22.92■■□□□ 1.26
TSNARE1-202ENST00000518720 MYT1Q01538 1121 aa22.92■■□□□ 1.26
TSNARE1-202ENST00000518720 FAM98CQ17RN3 349 aaKnown RBP22.92■■□□□ 1.26
TSNARE1-202ENST00000518720 THSD7AQ9UPZ6 1657 aa22.92■■□□□ 1.26
TSNARE1-202ENST00000518720 MEGF6O75095 1541 aa22.92■■□□□ 1.26
TSNARE1-202ENST00000518720 LRRC37A3O60309 1634 aa22.91■■□□□ 1.26
TSNARE1-202ENST00000518720 U2AF1L5P0DN76 240 aaPredicted RBP22.91■■□□□ 1.26
TSNARE1-202ENST00000518720 U2AF1Q01081 240 aaKnown RBP eCLIP22.91■■□□□ 1.26
TSNARE1-202ENST00000518720 WDR43Q15061 677 aaKnown RBP eCLIP22.91■■□□□ 1.26
TSNARE1-202ENST00000518720 SULT6B1Q6IMI4 303 aa22.91■■□□□ 1.26
TSNARE1-202ENST00000518720 AEBP1Q8IUX7 1158 aa22.91■■□□□ 1.26
TSNARE1-202ENST00000518720 RBM6P78332 1123 aaKnown RBP22.9■■□□□ 1.26
TSNARE1-202ENST00000518720 THRAP3Q9Y2W1 955 aaKnown RBP22.9■■□□□ 1.26
TSNARE1-202ENST00000518720 RXRBP28702 533 aa22.89■■□□□ 1.25
TSNARE1-202ENST00000518720 DISP2A7MBM2 1401 aa22.89■■□□□ 1.25
TSNARE1-202ENST00000518720 BRWD3Q6RI45 1802 aa22.88■■□□□ 1.25
TSNARE1-202ENST00000518720 RAPGEF4Q8WZA2 1011 aa22.88■■□□□ 1.25
TSNARE1-202ENST00000518720 PKD1L3Q7Z443 1732 aa22.88■■□□□ 1.25
TSNARE1-202ENST00000518720 KDRP35968 1356 aa22.88■■□□□ 1.25
TSNARE1-202ENST00000518720 CCER2I3L3R5 266 aa22.87■■□□□ 1.25
TSNARE1-202ENST00000518720 IL2RBP14784 551 aa22.87■■□□□ 1.25
TSNARE1-202ENST00000518720 BARGINQ6ZT62 677 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms