RNA–Protein interactions for RNA: ENST00000518699.3

NKX6-3-201, Transcript of NK6 homeobox 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX6-3, Length 1,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-201ENST00000518699 AFF2P51816 1311 aa31.12■■■□□ 2.57
NKX6-3-201ENST00000518699 RRS1Q15050 365 aaKnown RBP31.12■■■□□ 2.57
NKX6-3-201ENST00000518699 FLT4P35916 1363 aa31.11■■■□□ 2.57
NKX6-3-201ENST00000518699 CDK12Q9NYV4 1490 aaPredicted RBP31.11■■■□□ 2.57
NKX6-3-201ENST00000518699 FAM208AQ9UK61 1670 aaKnown RBP31.11■■■□□ 2.57
NKX6-3-201ENST00000518699 TNNT2P45379 298 aaPredicted RBP31.1■■■□□ 2.57
NKX6-3-201ENST00000518699 ZBTB7CA1YPR0 619 aa31.09■■■□□ 2.57
NKX6-3-201ENST00000518699 BTG4Q9NY30 223 aa31.08■■■□□ 2.57
NKX6-3-201ENST00000518699 POLKQ9UBT6 870 aa31.08■■■□□ 2.57
NKX6-3-201ENST00000518699 EMILIN1Q9Y6C2 1016 aa31.08■■■□□ 2.57
NKX6-3-201ENST00000518699 IP6K1Q92551 441 aa31.07■■■□□ 2.56
NKX6-3-201ENST00000518699 HOXC9P31274 260 aa31.06■■■□□ 2.56
NKX6-3-201ENST00000518699 CNGB1Q14028 1251 aaPredicted RBP31.06■■■□□ 2.56
NKX6-3-201ENST00000518699 AMPHP49418 695 aa31.05■■■□□ 2.56
NKX6-3-201ENST00000518699 USP21Q9UK80 565 aa31.05■■■□□ 2.56
NKX6-3-201ENST00000518699 AXIN2Q9Y2T1 843 aa31.05■■■□□ 2.56
NKX6-3-201ENST00000518699 UNC5CLQ8IV45 518 aa31.05■■■□□ 2.56
NKX6-3-201ENST00000518699 INSRP06213 1382 aa31.04■■■□□ 2.56
NKX6-3-201ENST00000518699 RALBP1Q15311 655 aa31.04■■■□□ 2.56
NKX6-3-201ENST00000518699 ATRNO75882 1429 aa31.03■■■□□ 2.56
NKX6-3-201ENST00000518699 PHF23Q9BUL5 403 aaPredicted RBP31.03■■■□□ 2.56
NKX6-3-201ENST00000518699 ZNF772Q68DY9 489 aaPredicted RBP31.02■■■□□ 2.56
NKX6-3-201ENST00000518699 ERBB3P21860 1342 aa31.02■■■□□ 2.56
NKX6-3-201ENST00000518699 RGS17Q9UGC6 210 aaPredicted RBP31■■■□□ 2.55
NKX6-3-201ENST00000518699 PPP2R1AP30153 589 aa30.99■■■□□ 2.55
NKX6-3-201ENST00000518699 PRKRIP1Q9H875 184 aaPredicted RBP30.99■■■□□ 2.55
NKX6-3-201ENST00000518699 WDR17Q8IZU2 1322 aa30.98■■■□□ 2.55
NKX6-3-201ENST00000518699 PPM1GO15355 546 aaPredicted RBP30.97■■■□□ 2.55
NKX6-3-201ENST00000518699 RGPD2P0DJD1 1756 aa30.97■■■□□ 2.55
NKX6-3-201ENST00000518699 GLI3P10071 1580 aa30.96■■■□□ 2.55
NKX6-3-201ENST00000518699 COL3A1P02461 1466 aaPredicted RBP30.96■■■□□ 2.55
NKX6-3-201ENST00000518699 CRB1P82279 1406 aa30.96■■■□□ 2.55
NKX6-3-201ENST00000518699 MTHFSP49914 203 aa30.96■■■□□ 2.55
NKX6-3-201ENST00000518699 VPS72Q15906 364 aa30.96■■■□□ 2.55
NKX6-3-201ENST00000518699 HSP90AB2PQ58FF8 381 aa30.96■■■□□ 2.55
NKX6-3-201ENST00000518699 TRPC5Q9UL62 973 aaPredicted RBP30.96■■■□□ 2.55
NKX6-3-201ENST00000518699 WNK3Q9BYP7 1800 aa30.96■■■□□ 2.55
NKX6-3-201ENST00000518699 ANKRD24Q8TF21 1146 aa30.95■■■□□ 2.55
NKX6-3-201ENST00000518699 STRN4Q9NRL3 753 aa30.95■■■□□ 2.55
NKX6-3-201ENST00000518699 EVA1CP58658 441 aa30.94■■■□□ 2.54
NKX6-3-201ENST00000518699 MYBBP1AQ9BQG0 1328 aaKnown RBP30.94■■■□□ 2.54
NKX6-3-201ENST00000518699 RGPD1P0DJD0 1748 aa30.92■■■□□ 2.54
NKX6-3-201ENST00000518699 LARP1Q6PKG0 1096 aaKnown RBP30.92■■■□□ 2.54
NKX6-3-201ENST00000518699 SPATA31A5Q5VU36 1347 aa30.91■■■□□ 2.54
NKX6-3-201ENST00000518699 SPATA31A7Q8IWB4 1347 aa30.91■■■□□ 2.54
NKX6-3-201ENST00000518699 QTRT2Q9H974 415 aaKnown RBP30.89■■■□□ 2.54
NKX6-3-201ENST00000518699 SPATA31A1Q5TZJ5 1347 aa30.88■■■□□ 2.53
NKX6-3-201ENST00000518699 NCAPD2Q15021 1401 aa30.88■■■□□ 2.53
NKX6-3-201ENST00000518699 ANP32CO43423 234 aa30.88■■■□□ 2.53
NKX6-3-201ENST00000518699 CSB-PGBD3P0DP91 1061 aa30.88■■■□□ 2.53
NKX6-3-201ENST00000518699 LTV1Q96GA3 475 aaPredicted RBP30.87■■■□□ 2.53
NKX6-3-201ENST00000518699 GJD4Q96KN9 370 aaPredicted RBP30.87■■■□□ 2.53
NKX6-3-201ENST00000518699 EIF4A2Q14240 407 aaKnown RBP30.86■■■□□ 2.53
NKX6-3-201ENST00000518699 POTEAQ6S8J7 498 aa30.86■■■□□ 2.53
NKX6-3-201ENST00000518699 TOM1L2Q6ZVM7 507 aa30.86■■■□□ 2.53
NKX6-3-201ENST00000518699 THSD7AQ9UPZ6 1657 aa30.85■■■□□ 2.53
NKX6-3-201ENST00000518699 CARD10Q9BWT7 1032 aa30.85■■■□□ 2.53
NKX6-3-201ENST00000518699 CFAP53Q96M91 514 aa30.84■■■□□ 2.53
NKX6-3-201ENST00000518699 CCDC9Q9Y3X0 531 aaKnown RBP30.83■■■□□ 2.53
NKX6-3-201ENST00000518699 RBM6P78332 1123 aaKnown RBP30.82■■■□□ 2.52
NKX6-3-201ENST00000518699 NLRP2Q9NX02 1062 aa30.81■■■□□ 2.52
NKX6-3-201ENST00000518699 THRAP3Q9Y2W1 955 aaKnown RBP30.81■■■□□ 2.52
NKX6-3-201ENST00000518699 PARP4Q9UKK3 1724 aaKnown RBP30.81■■■□□ 2.52
NKX6-3-201ENST00000518699 IL13P35225 146 aa30.8■■■□□ 2.52
NKX6-3-201ENST00000518699 DISP2A7MBM2 1401 aa30.8■■■□□ 2.52
NKX6-3-201ENST00000518699 TCP11L2Q8N4U5 519 aa30.79■■■□□ 2.52
NKX6-3-201ENST00000518699 IGSF1Q8N6C5 1336 aa30.79■■■□□ 2.52
NKX6-3-201ENST00000518699 DIAPH1O60610 1272 aaKnown RBP30.79■■■□□ 2.52
NKX6-3-201ENST00000518699 NBPF6Q5VWK0 638 aa30.79■■■□□ 2.52
NKX6-3-201ENST00000518699 BARGINQ6ZT62 677 aa30.79■■■□□ 2.52
NKX6-3-201ENST00000518699 NBPF4Q96M43 638 aa30.79■■■□□ 2.52
NKX6-3-201ENST00000518699 DIEXFQ68CQ4 756 aaKnown RBP30.78■■■□□ 2.52
NKX6-3-201ENST00000518699 LRRC37A3O60309 1634 aa30.77■■■□□ 2.52
NKX6-3-201ENST00000518699 RXRBP28702 533 aa30.77■■■□□ 2.52
NKX6-3-201ENST00000518699 USP35Q9P2H5 1018 aa30.77■■■□□ 2.52
NKX6-3-201ENST00000518699 EYA1Q99502 592 aa30.76■■■□□ 2.51
NKX6-3-201ENST00000518699 RGS12O14924 1447 aa30.73■■■□□ 2.51
NKX6-3-201ENST00000518699 KDRP35968 1356 aa30.73■■■□□ 2.51
NKX6-3-201ENST00000518699 ONECUT3O60422 494 aaPredicted RBP30.73■■■□□ 2.51
NKX6-3-201ENST00000518699 MEGF6O75095 1541 aa30.72■■■□□ 2.51
NKX6-3-201ENST00000518699 FAM98CQ17RN3 349 aaKnown RBP30.71■■■□□ 2.51
NKX6-3-201ENST00000518699 CDCA7Q9BWT1 371 aaPredicted RBP30.71■■■□□ 2.51
NKX6-3-201ENST00000518699 PKD1L3Q7Z443 1732 aa30.7■■■□□ 2.51
NKX6-3-201ENST00000518699 PLEKHG2Q9H7P9 1386 aa30.7■■■□□ 2.51
NKX6-3-201ENST00000518699 USHBP1Q8N6Y0 703 aa30.7■■■□□ 2.51
NKX6-3-201ENST00000518699 BRWD3Q6RI45 1802 aa30.7■■■□□ 2.51
NKX6-3-201ENST00000518699 SHANK3Q9BYB0 1731 aa30.68■■■□□ 2.5
NKX6-3-201ENST00000518699 OVOS2A0A0G2JMS6 1433 aa30.68■■■□□ 2.5
NKX6-3-201ENST00000518699 IL2RBP14784 551 aa30.67■■■□□ 2.5
NKX6-3-201ENST00000518699 NUDCQ9Y266 331 aa30.67■■■□□ 2.5
NKX6-3-201ENST00000518699 TNS2Q63HR2 1409 aa30.66■■■□□ 2.5
NKX6-3-201ENST00000518699 U2SURPO15042 1029 aaKnown RBP30.63■■■□□ 2.49
NKX6-3-201ENST00000518699 SULT6B1Q6IMI4 303 aa30.63■■■□□ 2.49
NKX6-3-201ENST00000518699 AEBP1Q8IUX7 1158 aa30.63■■■□□ 2.49
NKX6-3-201ENST00000518699 SEPT12Q8IYM1 358 aa30.63■■■□□ 2.49
NKX6-3-201ENST00000518699 RAPGEF4Q8WZA2 1011 aa30.63■■■□□ 2.49
NKX6-3-201ENST00000518699 A0A0G2JS52 829 aa30.59■■■□□ 2.49
NKX6-3-201ENST00000518699 TATP17735 454 aaPredicted RBP30.59■■■□□ 2.49
NKX6-3-201ENST00000518699 MYT1Q01538 1121 aa30.59■■■□□ 2.49
NKX6-3-201ENST00000518699 CCDC184Q52MB2 194 aa30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms