RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 FNBP4Q8N3X1 1017 aaPredicted RBP16.15■□□□□ 0.18
AP3B1-203ENST00000517940 C8orf37Q96NL8 207 aa16.15■□□□□ 0.18
AP3B1-203ENST00000517940 PRDM11Q9NQV5 511 aa16.15■□□□□ 0.18
AP3B1-203ENST00000517940 CDK12Q9NYV4 1490 aaPredicted RBP16.14■□□□□ 0.17
AP3B1-203ENST00000517940 RTL1A6NKG5 1358 aa16.13■□□□□ 0.17
AP3B1-203ENST00000517940 HAP1P54257 671 aaPredicted RBP16.13■□□□□ 0.17
AP3B1-203ENST00000517940 FAM208AQ9UK61 1670 aaKnown RBP16.13■□□□□ 0.17
AP3B1-203ENST00000517940 AFF2P51816 1311 aa16.13■□□□□ 0.17
AP3B1-203ENST00000517940 RGPD1P0DJD0 1748 aa16.12■□□□□ 0.17
AP3B1-203ENST00000517940 HOXC9P31274 260 aa16.12■□□□□ 0.17
AP3B1-203ENST00000517940 PRKRIP1Q9H875 184 aaPredicted RBP16.12■□□□□ 0.17
AP3B1-203ENST00000517940 GLI3P10071 1580 aa16.12■□□□□ 0.17
AP3B1-203ENST00000517940 ATRNO75882 1429 aa16.11■□□□□ 0.17
AP3B1-203ENST00000517940 PPP2R1AP30153 589 aa16.11■□□□□ 0.17
AP3B1-203ENST00000517940 HSP90AB2PQ58FF8 381 aa16.11■□□□□ 0.17
AP3B1-203ENST00000517940 IP6K1Q92551 441 aa16.11■□□□□ 0.17
AP3B1-203ENST00000517940 BTG4Q9NY30 223 aa16.11■□□□□ 0.17
AP3B1-203ENST00000517940 FLT4P35916 1363 aa16.11■□□□□ 0.17
AP3B1-203ENST00000517940 KIF24Q5T7B8 1368 aa16.11■□□□□ 0.17
AP3B1-203ENST00000517940 BLMP54132 1417 aaPredicted RBP16.11■□□□□ 0.17
AP3B1-203ENST00000517940 ZBTB7CA1YPR0 619 aa16.1■□□□□ 0.17
AP3B1-203ENST00000517940 ERBB3P21860 1342 aa16.1■□□□□ 0.17
AP3B1-203ENST00000517940 INSRP06213 1382 aa16.1■□□□□ 0.17
AP3B1-203ENST00000517940 WNK3Q9BYP7 1800 aa16.1■□□□□ 0.17
AP3B1-203ENST00000517940 MEX3CQ5U5Q3 659 aaKnown RBP16.09■□□□□ 0.17
AP3B1-203ENST00000517940 NGLY1Q96IV0 654 aa16.09■□□□□ 0.17
AP3B1-203ENST00000517940 MTHFSP49914 203 aa16.08■□□□□ 0.16
AP3B1-203ENST00000517940 NCAPD2Q15021 1401 aa16.08■□□□□ 0.16
AP3B1-203ENST00000517940 LARP1Q6PKG0 1096 aaKnown RBP16.07■□□□□ 0.16
AP3B1-203ENST00000517940 UNC5CLQ8IV45 518 aa16.07■□□□□ 0.16
AP3B1-203ENST00000517940 AMPHP49418 695 aa16.06■□□□□ 0.16
AP3B1-203ENST00000517940 RALBP1Q15311 655 aa16.06■□□□□ 0.16
AP3B1-203ENST00000517940 POTEAQ6S8J7 498 aa16.06■□□□□ 0.16
AP3B1-203ENST00000517940 USP21Q9UK80 565 aa16.06■□□□□ 0.16
AP3B1-203ENST00000517940 WDR17Q8IZU2 1322 aa16.05■□□□□ 0.16
AP3B1-203ENST00000517940 ANKRD24Q8TF21 1146 aa16.05■□□□□ 0.16
AP3B1-203ENST00000517940 THSD7AQ9UPZ6 1657 aa16.05■□□□□ 0.16
AP3B1-203ENST00000517940 MYBBP1AQ9BQG0 1328 aaKnown RBP16.04■□□□□ 0.16
AP3B1-203ENST00000517940 PPM1GO15355 546 aaPredicted RBP16.04■□□□□ 0.16
AP3B1-203ENST00000517940 EIF4A2Q14240 407 aaKnown RBP16.04■□□□□ 0.16
AP3B1-203ENST00000517940 CCDC184Q52MB2 194 aa16.04■□□□□ 0.16
AP3B1-203ENST00000517940 CRB1P82279 1406 aa16.03■□□□□ 0.16
AP3B1-203ENST00000517940 SPATA31A5Q5VU36 1347 aa16.03■□□□□ 0.16
AP3B1-203ENST00000517940 SPATA31A7Q8IWB4 1347 aa16.03■□□□□ 0.16
AP3B1-203ENST00000517940 IL13P35225 146 aa16.03■□□□□ 0.16
AP3B1-203ENST00000517940 VPS72Q15906 364 aa16.03■□□□□ 0.16
AP3B1-203ENST00000517940 STRN4Q9NRL3 753 aa16.03■□□□□ 0.16
AP3B1-203ENST00000517940 DISP2A7MBM2 1401 aa16.02■□□□□ 0.16
AP3B1-203ENST00000517940 EP400Q96L91 3159 aa16.02■□□□□ 0.16
AP3B1-203ENST00000517940 SPATA31A1Q5TZJ5 1347 aa16.02■□□□□ 0.16
AP3B1-203ENST00000517940 LTV1Q96GA3 475 aaPredicted RBP16.02■□□□□ 0.16
AP3B1-203ENST00000517940 SHANK3Q9BYB0 1731 aa16.02■□□□□ 0.15
AP3B1-203ENST00000517940 NBPF6Q5VWK0 638 aa16.01■□□□□ 0.15
AP3B1-203ENST00000517940 NBPF4Q96M43 638 aa16.01■□□□□ 0.15
AP3B1-203ENST00000517940 DIEXFQ68CQ4 756 aaKnown RBP16■□□□□ 0.15
AP3B1-203ENST00000517940 EYA1Q99502 592 aa16■□□□□ 0.15
AP3B1-203ENST00000517940 LRRC37A3O60309 1634 aa16■□□□□ 0.15
AP3B1-203ENST00000517940 MEGF6O75095 1541 aa15.99■□□□□ 0.15
AP3B1-203ENST00000517940 IGSF1Q8N6C5 1336 aa15.99■□□□□ 0.15
AP3B1-203ENST00000517940 QTRT2Q9H974 415 aaKnown RBP15.99■□□□□ 0.15
AP3B1-203ENST00000517940 PARP4Q9UKK3 1724 aaKnown RBP15.99■□□□□ 0.15
AP3B1-203ENST00000517940 BRWD3Q6RI45 1802 aa15.98■□□□□ 0.15
AP3B1-203ENST00000517940 ZNF772Q68DY9 489 aaPredicted RBP15.98■□□□□ 0.15
AP3B1-203ENST00000517940 USHBP1Q8N6Y0 703 aa15.98■□□□□ 0.15
AP3B1-203ENST00000517940 GJD4Q96KN9 370 aaPredicted RBP15.98■□□□□ 0.15
AP3B1-203ENST00000517940 CARD10Q9BWT7 1032 aa15.98■□□□□ 0.15
AP3B1-203ENST00000517940 TRPC5Q9UL62 973 aaPredicted RBP15.98■□□□□ 0.15
AP3B1-203ENST00000517940 RGS12O14924 1447 aa15.97■□□□□ 0.15
AP3B1-203ENST00000517940 AEBP1Q8IUX7 1158 aa15.97■□□□□ 0.15
AP3B1-203ENST00000517940 KDRP35968 1356 aa15.97■□□□□ 0.15
AP3B1-203ENST00000517940 PKD1L3Q7Z443 1732 aa15.97■□□□□ 0.15
AP3B1-203ENST00000517940 ANP32CO43423 234 aa15.96■□□□□ 0.15
AP3B1-203ENST00000517940 EVA1CP58658 441 aa15.96■□□□□ 0.15
AP3B1-203ENST00000517940 TOM1L2Q6ZVM7 507 aa15.96■□□□□ 0.15
AP3B1-203ENST00000517940 PHF23Q9BUL5 403 aaPredicted RBP15.95■□□□□ 0.14
AP3B1-203ENST00000517940 NLRP2Q9NX02 1062 aa15.95■□□□□ 0.14
AP3B1-203ENST00000517940 ONECUT3O60422 494 aaPredicted RBP15.94■□□□□ 0.14
AP3B1-203ENST00000517940 DIAPH1O60610 1272 aaKnown RBP15.94■□□□□ 0.14
AP3B1-203ENST00000517940 CSB-PGBD3P0DP91 1061 aa15.94■□□□□ 0.14
AP3B1-203ENST00000517940 TCP11L2Q8N4U5 519 aa15.94■□□□□ 0.14
AP3B1-203ENST00000517940 USP35Q9P2H5 1018 aa15.94■□□□□ 0.14
AP3B1-203ENST00000517940 BARGINQ6ZT62 677 aa15.93■□□□□ 0.14
AP3B1-203ENST00000517940 MIER1Q8N108 512 aa15.93■□□□□ 0.14
AP3B1-203ENST00000517940 OVOS2A0A0G2JMS6 1433 aa15.93■□□□□ 0.14
AP3B1-203ENST00000517940 RBM6P78332 1123 aaKnown RBP15.92■□□□□ 0.14
AP3B1-203ENST00000517940 FAM98CQ17RN3 349 aaKnown RBP15.92■□□□□ 0.14
AP3B1-203ENST00000517940 THRAP3Q9Y2W1 955 aaKnown RBP15.91■□□□□ 0.14
AP3B1-203ENST00000517940 CCDC9Q9Y3X0 531 aaKnown RBP15.9■□□□□ 0.14
AP3B1-203ENST00000517940 TNS2Q63HR2 1409 aa15.9■□□□□ 0.14
AP3B1-203ENST00000517940 HMOX1P09601 288 aa15.89■□□□□ 0.13
AP3B1-203ENST00000517940 SULT6B1Q6IMI4 303 aa15.89■□□□□ 0.13
AP3B1-203ENST00000517940 CFAP53Q96M91 514 aa15.89■□□□□ 0.13
AP3B1-203ENST00000517940 RSPH6AQ9H0K4 717 aa15.89■□□□□ 0.13
AP3B1-203ENST00000517940 RXRBP28702 533 aa15.88■□□□□ 0.13
AP3B1-203ENST00000517940 IL2RBP14784 551 aa15.87■□□□□ 0.13
AP3B1-203ENST00000517940 SEPT12Q8IYM1 358 aa15.87■□□□□ 0.13
AP3B1-203ENST00000517940 PNISRQ8TF01 805 aaKnown RBP15.87■□□□□ 0.13
AP3B1-203ENST00000517940 TOGARAM1Q9Y4F4 1720 aa15.87■□□□□ 0.13
AP3B1-203ENST00000517940 U2SURPO15042 1029 aaKnown RBP15.86■□□□□ 0.13
AP3B1-203ENST00000517940 PLEKHF1Q96S99 279 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms