RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 LILRA6Q6PI73 481 aa1.94□□□□□ -2.1
RNU6-542P-201ENST00000516405 POU5F2Q8N7G0 328 aa1.94□□□□□ -2.1
RNU6-542P-201ENST00000516405 NOP53Q9NZM5 478 aaKnown RBP1.94□□□□□ -2.1
RNU6-542P-201ENST00000516405 MX2P20592 715 aa1.93□□□□□ -2.1
RNU6-542P-201ENST00000516405 OSBPP22059 807 aa1.93□□□□□ -2.1
RNU6-542P-201ENST00000516405 SPINT1O43278 529 aa1.92□□□□□ -2.1
RNU6-542P-201ENST00000516405 VARSP26640 1264 aaKnown RBP1.92□□□□□ -2.1
RNU6-542P-201ENST00000516405 GP2P55259 537 aaKnown RBP1.92□□□□□ -2.1
RNU6-542P-201ENST00000516405 DBN1Q16643 649 aa1.92□□□□□ -2.1
RNU6-542P-201ENST00000516405 FAM161AQ3B820 660 aa1.92□□□□□ -2.1
RNU6-542P-201ENST00000516405 CSRNP1Q96S65 589 aa1.92□□□□□ -2.1
RNU6-542P-201ENST00000516405 WDR26Q9H7D7 661 aa1.92□□□□□ -2.1
RNU6-542P-201ENST00000516405 PIK3R2O00459 728 aa1.91□□□□□ -2.1
RNU6-542P-201ENST00000516405 SPATA31C1P0DKV0 1188 aa1.91□□□□□ -2.1
RNU6-542P-201ENST00000516405 GRM5P41594 1212 aa1.91□□□□□ -2.1
RNU6-542P-201ENST00000516405 CTSOP43234 321 aaPredicted RBP1.91□□□□□ -2.1
RNU6-542P-201ENST00000516405 PDIA6Q15084 440 aa1.91□□□□□ -2.1
RNU6-542P-201ENST00000516405 RBM46Q8TBY0 533 aaKnown RBP1.91□□□□□ -2.1
RNU6-542P-201ENST00000516405 TRIM11Q96F44 468 aa1.91□□□□□ -2.1
RNU6-542P-201ENST00000516405 CDK15Q96Q40 435 aa1.91□□□□□ -2.1
RNU6-542P-201ENST00000516405 ADGRG1Q9Y653 693 aa1.91□□□□□ -2.1
RNU6-542P-201ENST00000516405 GRXCR2A6NFK2 248 aa1.9□□□□□ -2.11
RNU6-542P-201ENST00000516405 ADAMTS4O75173 837 aa1.9□□□□□ -2.11
RNU6-542P-201ENST00000516405 AMPD1P23109 780 aa1.9□□□□□ -2.11
RNU6-542P-201ENST00000516405 SSTR4P31391 388 aa1.9□□□□□ -2.11
RNU6-542P-201ENST00000516405 COL9A3Q14050 684 aaPredicted RBP1.9□□□□□ -2.11
RNU6-542P-201ENST00000516405 LINC01559Q495D7 138 aa1.9□□□□□ -2.11
RNU6-542P-201ENST00000516405 TRIM22Q8IYM9 498 aa1.9□□□□□ -2.11
RNU6-542P-201ENST00000516405 KLRG1Q96E93 195 aa1.9□□□□□ -2.11
RNU6-542P-201ENST00000516405 BTBD6Q96KE9 485 aa1.9□□□□□ -2.11
RNU6-542P-201ENST00000516405 USB1Q9BQ65 265 aaKnown RBP1.9□□□□□ -2.11
RNU6-542P-201ENST00000516405 SPTLC1O15269 473 aa1.89□□□□□ -2.11
RNU6-542P-201ENST00000516405 MED26O95402 600 aa1.89□□□□□ -2.11
RNU6-542P-201ENST00000516405 NR5A1Q13285 461 aa1.89□□□□□ -2.11
RNU6-542P-201ENST00000516405 RNF217Q8TC41 542 aa1.89□□□□□ -2.11
RNU6-542P-201ENST00000516405 BAP1Q92560 729 aa1.89□□□□□ -2.11
RNU6-542P-201ENST00000516405 GTPBP3Q969Y2 492 aaKnown RBP1.89□□□□□ -2.11
RNU6-542P-201ENST00000516405 DBX1A6NMT0 343 aa1.88□□□□□ -2.11
RNU6-542P-201ENST00000516405 MAP2K3P46734 347 aa1.88□□□□□ -2.11
RNU6-542P-201ENST00000516405 CD97P48960 835 aa1.88□□□□□ -2.11
RNU6-542P-201ENST00000516405 ARID5BQ14865 1188 aa1.88□□□□□ -2.11
RNU6-542P-201ENST00000516405 ZNF124Q15973 351 aa1.88□□□□□ -2.11
RNU6-542P-201ENST00000516405 FOXR1Q6PIV2 292 aa1.88□□□□□ -2.11
RNU6-542P-201ENST00000516405 GMCL1Q96IK5 515 aa1.88□□□□□ -2.11
RNU6-542P-201ENST00000516405 PLVAPQ9BX97 442 aa1.88□□□□□ -2.11
RNU6-542P-201ENST00000516405 NSFL1CQ9UNZ2 370 aaKnown RBP1.88□□□□□ -2.11
RNU6-542P-201ENST00000516405 RGL2O15211 777 aa1.87□□□□□ -2.11
RNU6-542P-201ENST00000516405 RSPH4AQ5TD94 716 aa1.87□□□□□ -2.11
RNU6-542P-201ENST00000516405 INSM2Q96T92 566 aaPredicted RBP1.87□□□□□ -2.11
RNU6-542P-201ENST00000516405 GDF2Q9UK05 429 aaPredicted RBP1.87□□□□□ -2.11
RNU6-542P-201ENST00000516405 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP1.86□□□□□ -2.11
RNU6-542P-201ENST00000516405 GCGRP47871 477 aa1.86□□□□□ -2.11
RNU6-542P-201ENST00000516405 RGS19P49795 217 aa1.86□□□□□ -2.11
RNU6-542P-201ENST00000516405 CBLBQ13191 982 aa1.86□□□□□ -2.11
RNU6-542P-201ENST00000516405 Q6ZVU0 165 aa1.86□□□□□ -2.11
RNU6-542P-201ENST00000516405 MICALL1Q8N3F8 863 aa1.86□□□□□ -2.11
RNU6-542P-201ENST00000516405 ZNF511Q8NB15 262 aa1.86□□□□□ -2.11
RNU6-542P-201ENST00000516405 NUDT12Q9BQG2 462 aa1.86□□□□□ -2.11
RNU6-542P-201ENST00000516405 ADGRE2Q9UHX3 823 aa1.86□□□□□ -2.11
RNU6-542P-201ENST00000516405 EPXP11678 715 aa1.85□□□□□ -2.11
RNU6-542P-201ENST00000516405 NKX1-1Q15270 411 aaPredicted RBP1.85□□□□□ -2.11
RNU6-542P-201ENST00000516405 Q3C1V9 767 aa1.85□□□□□ -2.11
RNU6-542P-201ENST00000516405 GOLGA6L1Q8N7Z2 621 aa1.85□□□□□ -2.11
RNU6-542P-201ENST00000516405 TRERF1Q96PN7 1200 aa1.85□□□□□ -2.11
RNU6-542P-201ENST00000516405 UNC93B1Q9H1C4 597 aa1.85□□□□□ -2.11
RNU6-542P-201ENST00000516405 APBA3O96018 575 aa1.84□□□□□ -2.11
RNU6-542P-201ENST00000516405 JUNDP17535 347 aa1.84□□□□□ -2.11
RNU6-542P-201ENST00000516405 ZNF648Q5T619 568 aaPredicted RBP1.84□□□□□ -2.11
RNU6-542P-201ENST00000516405 RDH13Q8NBN7 331 aa1.84□□□□□ -2.11
RNU6-542P-201ENST00000516405 FAM174AQ8TBP5 190 aa1.84□□□□□ -2.11
RNU6-542P-201ENST00000516405 TP53INP1Q96A56 240 aa1.84□□□□□ -2.11
RNU6-542P-201ENST00000516405 GGA1Q9UJY5 639 aa1.84□□□□□ -2.11
RNU6-542P-201ENST00000516405 SPDYE16A6NNV3 312 aaPredicted RBP1.83□□□□□ -2.12
RNU6-542P-201ENST00000516405 KIAA1324LA8MWY0 1029 aaPredicted RBP1.83□□□□□ -2.12
RNU6-542P-201ENST00000516405 FAM229AH3BQW9 127 aa1.83□□□□□ -2.12
RNU6-542P-201ENST00000516405 C2CD2LO14523 706 aa1.83□□□□□ -2.12
RNU6-542P-201ENST00000516405 GRIK4Q16099 956 aa1.83□□□□□ -2.12
RNU6-542P-201ENST00000516405 PRPF38BQ5VTL8 546 aaKnown RBP1.83□□□□□ -2.12
RNU6-542P-201ENST00000516405 FOXD4L5Q5VV16 416 aaPredicted RBP1.83□□□□□ -2.12
RNU6-542P-201ENST00000516405 SLCO4C1Q6ZQN7 724 aa1.83□□□□□ -2.12
RNU6-542P-201ENST00000516405 RIPOR1Q6ZS17 1223 aa1.83□□□□□ -2.12
RNU6-542P-201ENST00000516405 CHSY3Q70JA7 882 aa1.83□□□□□ -2.12
RNU6-542P-201ENST00000516405 AGBL1Q96MI9 1066 aa1.83□□□□□ -2.12
RNU6-542P-201ENST00000516405 FCHSD2O94868 740 aa1.82□□□□□ -2.12
RNU6-542P-201ENST00000516405 THBS1P07996 1170 aa1.82□□□□□ -2.12
RNU6-542P-201ENST00000516405 KRTAP5-11Q6L8G4 156 aa1.82□□□□□ -2.12
RNU6-542P-201ENST00000516405 CADPS2Q86UW7 1296 aa1.82□□□□□ -2.12
RNU6-542P-201ENST00000516405 PXYLP1Q8TE99 480 aa1.82□□□□□ -2.12
RNU6-542P-201ENST00000516405 FOXJ1Q92949 421 aa1.82□□□□□ -2.12
RNU6-542P-201ENST00000516405 SSBP4Q9BWG4 385 aaPredicted RBP1.82□□□□□ -2.12
RNU6-542P-201ENST00000516405 POLMQ9NP87 494 aaPredicted RBP1.82□□□□□ -2.12
RNU6-542P-201ENST00000516405 RHOQP17081 205 aa1.81□□□□□ -2.12
RNU6-542P-201ENST00000516405 NRG1Q02297 640 aaPredicted RBP1.81□□□□□ -2.12
RNU6-542P-201ENST00000516405 ADGRE1Q14246 886 aa1.81□□□□□ -2.12
RNU6-542P-201ENST00000516405 MBTPS1Q14703 1052 aa1.81□□□□□ -2.12
RNU6-542P-201ENST00000516405 KRTAP19-4Q3LI73 84 aa1.81□□□□□ -2.12
RNU6-542P-201ENST00000516405 RNF135Q8IUD6 432 aa1.81□□□□□ -2.12
RNU6-542P-201ENST00000516405 HLA-CQ95604 372 aa1.81□□□□□ -2.12
RNU6-542P-201ENST00000516405 EMILIN1Q9Y6C2 1016 aa1.81□□□□□ -2.12
RNU6-542P-201ENST00000516405 DDX11L8A8MPP1 907 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms