RNA–Protein interactions for RNA: ENST00000511130.6

CSNK1G3-206, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 2 BASIC

Gene CSNK1G3, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-206ENST00000511130 IP6K1Q92551 441 aa28.69■■■□□ 2.18
CSNK1G3-206ENST00000511130 LMO7Q8WWI1 1683 aa28.69■■■□□ 2.18
CSNK1G3-206ENST00000511130 CAMTA1Q9Y6Y1 1673 aa28.69■■■□□ 2.18
CSNK1G3-206ENST00000511130 SMG6Q86US8 1419 aaKnown RBP28.68■■■□□ 2.18
CSNK1G3-206ENST00000511130 HSP90AB2PQ58FF8 381 aa28.67■■■□□ 2.18
CSNK1G3-206ENST00000511130 BTG4Q9NY30 223 aa28.67■■■□□ 2.18
CSNK1G3-206ENST00000511130 PLCH1Q4KWH8 1693 aa28.66■■■□□ 2.18
CSNK1G3-206ENST00000511130 RGPD5Q99666 1765 aa28.65■■■□□ 2.18
CSNK1G3-206ENST00000511130 RTL1A6NKG5 1358 aa28.65■■■□□ 2.18
CSNK1G3-206ENST00000511130 FLT4P35916 1363 aa28.65■■■□□ 2.18
CSNK1G3-206ENST00000511130 SLIT2O94813 1529 aa28.65■■■□□ 2.18
CSNK1G3-206ENST00000511130 MYBBP1AQ9BQG0 1328 aaKnown RBP28.64■■■□□ 2.18
CSNK1G3-206ENST00000511130 FNBP4Q8N3X1 1017 aaPredicted RBP28.63■■■□□ 2.17
CSNK1G3-206ENST00000511130 AFF2P51816 1311 aa28.63■■■□□ 2.17
CSNK1G3-206ENST00000511130 LTV1Q96GA3 475 aaPredicted RBP28.62■■■□□ 2.17
CSNK1G3-206ENST00000511130 KIF24Q5T7B8 1368 aa28.62■■■□□ 2.17
CSNK1G3-206ENST00000511130 STRN4Q9NRL3 753 aa28.62■■■□□ 2.17
CSNK1G3-206ENST00000511130 ABCC6O95255 1503 aa28.61■■■□□ 2.17
CSNK1G3-206ENST00000511130 BCL9LQ86UU0 1499 aa28.61■■■□□ 2.17
CSNK1G3-206ENST00000511130 INSRP06213 1382 aa28.61■■■□□ 2.17
CSNK1G3-206ENST00000511130 CDK12Q9NYV4 1490 aaPredicted RBP28.6■■■□□ 2.17
CSNK1G3-206ENST00000511130 ANKRD24Q8TF21 1146 aa28.6■■■□□ 2.17
CSNK1G3-206ENST00000511130 COL5A2P05997 1499 aaPredicted RBP28.59■■■□□ 2.17
CSNK1G3-206ENST00000511130 BLMP54132 1417 aaPredicted RBP28.59■■■□□ 2.17
CSNK1G3-206ENST00000511130 USP21Q9UK80 565 aa28.59■■■□□ 2.17
CSNK1G3-206ENST00000511130 NRAPQ86VF7 1730 aa28.58■■■□□ 2.17
CSNK1G3-206ENST00000511130 EVA1CP58658 441 aa28.58■■■□□ 2.17
CSNK1G3-206ENST00000511130 NWD2Q9ULI1 1742 aa28.57■■■□□ 2.16
CSNK1G3-206ENST00000511130 UNC5CLQ8IV45 518 aa28.57■■■□□ 2.16
CSNK1G3-206ENST00000511130 ERBB3P21860 1342 aa28.56■■■□□ 2.16
CSNK1G3-206ENST00000511130 EIF4A2Q14240 407 aaKnown RBP28.56■■■□□ 2.16
CSNK1G3-206ENST00000511130 LARP1Q6PKG0 1096 aaKnown RBP28.56■■■□□ 2.16
CSNK1G3-206ENST00000511130 COL3A1P02461 1466 aaPredicted RBP28.55■■■□□ 2.16
CSNK1G3-206ENST00000511130 CCDC184Q52MB2 194 aa28.55■■■□□ 2.16
CSNK1G3-206ENST00000511130 CSB-PGBD3P0DP91 1061 aa28.53■■■□□ 2.16
CSNK1G3-206ENST00000511130 RGS17Q9UGC6 210 aaPredicted RBP28.53■■■□□ 2.16
CSNK1G3-206ENST00000511130 MIER1Q8N108 512 aa28.52■■■□□ 2.16
CSNK1G3-206ENST00000511130 WDR17Q8IZU2 1322 aa28.52■■■□□ 2.16
CSNK1G3-206ENST00000511130 IL13P35225 146 aa28.51■■■□□ 2.16
CSNK1G3-206ENST00000511130 CFAP53Q96M91 514 aa28.51■■■□□ 2.16
CSNK1G3-206ENST00000511130 DIAPH1O60610 1272 aaKnown RBP28.5■■■□□ 2.15
CSNK1G3-206ENST00000511130 VPS72Q15906 364 aa28.49■■■□□ 2.15
CSNK1G3-206ENST00000511130 NBPF6Q5VWK0 638 aa28.49■■■□□ 2.15
CSNK1G3-206ENST00000511130 TOM1L2Q6ZVM7 507 aa28.49■■■□□ 2.15
CSNK1G3-206ENST00000511130 NBPF4Q96M43 638 aa28.49■■■□□ 2.15
CSNK1G3-206ENST00000511130 PHF23Q9BUL5 403 aaPredicted RBP28.49■■■□□ 2.15
CSNK1G3-206ENST00000511130 NLRP2Q9NX02 1062 aa28.49■■■□□ 2.15
CSNK1G3-206ENST00000511130 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.48■■■□□ 2.15
CSNK1G3-206ENST00000511130 RGPD2P0DJD1 1756 aa28.48■■■□□ 2.15
CSNK1G3-206ENST00000511130 USHBP1Q8N6Y0 703 aa28.47■■■□□ 2.15
CSNK1G3-206ENST00000511130 EYA1Q99502 592 aa28.47■■■□□ 2.15
CSNK1G3-206ENST00000511130 QTRT2Q9H974 415 aaKnown RBP28.47■■■□□ 2.15
CSNK1G3-206ENST00000511130 CCDC9Q9Y3X0 531 aaKnown RBP28.47■■■□□ 2.15
CSNK1G3-206ENST00000511130 ATRNO75882 1429 aa28.47■■■□□ 2.15
CSNK1G3-206ENST00000511130 ZNF772Q68DY9 489 aaPredicted RBP28.46■■■□□ 2.15
CSNK1G3-206ENST00000511130 USP35Q9P2H5 1018 aa28.46■■■□□ 2.15
CSNK1G3-206ENST00000511130 CRB1P82279 1406 aa28.46■■■□□ 2.15
CSNK1G3-206ENST00000511130 TRPC5Q9UL62 973 aaPredicted RBP28.45■■■□□ 2.14
CSNK1G3-206ENST00000511130 SPATA31A5Q5VU36 1347 aa28.45■■■□□ 2.14
CSNK1G3-206ENST00000511130 SPATA31A7Q8IWB4 1347 aa28.45■■■□□ 2.14
CSNK1G3-206ENST00000511130 CARD10Q9BWT7 1032 aa28.44■■■□□ 2.14
CSNK1G3-206ENST00000511130 SPATA31A1Q5TZJ5 1347 aa28.44■■■□□ 2.14
CSNK1G3-206ENST00000511130 POTEAQ6S8J7 498 aa28.42■■■□□ 2.14
CSNK1G3-206ENST00000511130 U2SURPO15042 1029 aaKnown RBP28.41■■■□□ 2.14
CSNK1G3-206ENST00000511130 MRS2Q9HD23 443 aa28.41■■■□□ 2.14
CSNK1G3-206ENST00000511130 GJD4Q96KN9 370 aaPredicted RBP28.4■■■□□ 2.14
CSNK1G3-206ENST00000511130 IGSF1Q8N6C5 1336 aa28.4■■■□□ 2.14
CSNK1G3-206ENST00000511130 FAM208AQ9UK61 1670 aaKnown RBP28.4■■■□□ 2.14
CSNK1G3-206ENST00000511130 RGPD1P0DJD0 1748 aa28.4■■■□□ 2.14
CSNK1G3-206ENST00000511130 AEBP1Q8IUX7 1158 aa28.39■■■□□ 2.14
CSNK1G3-206ENST00000511130 GLI3P10071 1580 aa28.38■■■□□ 2.13
CSNK1G3-206ENST00000511130 NUDCQ9Y266 331 aa28.37■■■□□ 2.13
CSNK1G3-206ENST00000511130 HMOX1P09601 288 aa28.37■■■□□ 2.13
CSNK1G3-206ENST00000511130 SULT6B1Q6IMI4 303 aa28.37■■■□□ 2.13
CSNK1G3-206ENST00000511130 TCP11L2Q8N4U5 519 aa28.37■■■□□ 2.13
CSNK1G3-206ENST00000511130 NCAPD2Q15021 1401 aa28.36■■■□□ 2.13
CSNK1G3-206ENST00000511130 U2AF1L5P0DN76 240 aaPredicted RBP28.35■■■□□ 2.13
CSNK1G3-206ENST00000511130 U2AF1Q01081 240 aaKnown RBP eCLIP28.35■■■□□ 2.13
CSNK1G3-206ENST00000511130 CCER2I3L3R5 266 aa28.34■■■□□ 2.13
CSNK1G3-206ENST00000511130 FAM98CQ17RN3 349 aaKnown RBP28.34■■■□□ 2.13
CSNK1G3-206ENST00000511130 THRAP3Q9Y2W1 955 aaKnown RBP28.32■■■□□ 2.12
CSNK1G3-206ENST00000511130 RBM6P78332 1123 aaKnown RBP28.31■■■□□ 2.12
CSNK1G3-206ENST00000511130 PNISRQ8TF01 805 aaKnown RBP28.31■■■□□ 2.12
CSNK1G3-206ENST00000511130 BARGINQ6ZT62 677 aa28.3■■■□□ 2.12
CSNK1G3-206ENST00000511130 MEGF6O75095 1541 aa28.3■■■□□ 2.12
CSNK1G3-206ENST00000511130 DISP2A7MBM2 1401 aa28.29■■■□□ 2.12
CSNK1G3-206ENST00000511130 RXRBP28702 533 aa28.29■■■□□ 2.12
CSNK1G3-206ENST00000511130 WDR43Q15061 677 aaKnown RBP eCLIP28.29■■■□□ 2.12
CSNK1G3-206ENST00000511130 ADAMTS8Q9UP79 889 aa28.29■■■□□ 2.12
CSNK1G3-206ENST00000511130 KDRP35968 1356 aa28.29■■■□□ 2.12
CSNK1G3-206ENST00000511130 IL2RBP14784 551 aa28.28■■■□□ 2.12
CSNK1G3-206ENST00000511130 RSPH6AQ9H0K4 717 aa28.28■■■□□ 2.12
CSNK1G3-206ENST00000511130 RAPGEF4Q8WZA2 1011 aa28.26■■■□□ 2.12
CSNK1G3-206ENST00000511130 WNK3Q9BYP7 1800 aa28.26■■■□□ 2.11
CSNK1G3-206ENST00000511130 ONECUT3O60422 494 aaPredicted RBP28.25■■■□□ 2.11
CSNK1G3-206ENST00000511130 TATP17735 454 aaPredicted RBP28.25■■■□□ 2.11
CSNK1G3-206ENST00000511130 PRKAR2BP31323 418 aa28.24■■■□□ 2.11
CSNK1G3-206ENST00000511130 A0A0G2JS52 829 aa28.24■■■□□ 2.11
CSNK1G3-206ENST00000511130 MYT1Q01538 1121 aa28.24■■■□□ 2.11
CSNK1G3-206ENST00000511130 FCHSD2O94868 740 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms