RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 NDUFV2P19404 249 aa8.44□□□□□ -1.06
RFC1-208ENST00000504849 BEND7Q8N7W2 519 aaPredicted RBP8.44□□□□□ -1.06
RFC1-208ENST00000504849 ENAMQ9NRM1 1142 aa8.44□□□□□ -1.06
RFC1-208ENST00000504849 CUEDC1Q9NWM3 386 aaPredicted RBP8.44□□□□□ -1.06
RFC1-208ENST00000504849 EMILIN1Q9Y6C2 1016 aa8.44□□□□□ -1.06
RFC1-208ENST00000504849 CBLBQ13191 982 aa8.43□□□□□ -1.06
RFC1-208ENST00000504849 MAP4K5Q9Y4K4 846 aa8.43□□□□□ -1.06
RFC1-208ENST00000504849 KRBA1A5PL33 1030 aa8.42□□□□□ -1.06
RFC1-208ENST00000504849 ITGB7P26010 798 aa8.42□□□□□ -1.06
RFC1-208ENST00000504849 CTSOP43234 321 aaPredicted RBP8.42□□□□□ -1.06
RFC1-208ENST00000504849 GPCPD1Q9NPB8 672 aa8.42□□□□□ -1.06
RFC1-208ENST00000504849 MOXD2PA6NHM9 499 aa8.41□□□□□ -1.06
RFC1-208ENST00000504849 MTMR2Q13614 643 aa8.41□□□□□ -1.06
RFC1-208ENST00000504849 CCDC116Q8IYX3 515 aa8.41□□□□□ -1.06
RFC1-208ENST00000504849 SPIRE2Q8WWL2 714 aa8.41□□□□□ -1.06
RFC1-208ENST00000504849 KRTAP4-8A0A0G2JLE6 195 aa8.4□□□□□ -1.06
RFC1-208ENST00000504849 BPHLQ86WA6 291 aaPredicted RBP8.4□□□□□ -1.06
RFC1-208ENST00000504849 AGERQ15109 404 aa8.39□□□□□ -1.07
RFC1-208ENST00000504849 TRMT44Q8IYL2 757 aaKnown RBP8.39□□□□□ -1.07
RFC1-208ENST00000504849 SPDYE5A6NIY4 337 aa8.38□□□□□ -1.07
RFC1-208ENST00000504849 PODNQ7Z5L7 613 aa8.38□□□□□ -1.07
RFC1-208ENST00000504849 RNF217Q8TC41 542 aa8.38□□□□□ -1.07
RFC1-208ENST00000504849 CFAP99D6REC4 459 aa8.37□□□□□ -1.07
RFC1-208ENST00000504849 BCRP11274 1271 aa8.37□□□□□ -1.07
RFC1-208ENST00000504849 CLCN1P35523 988 aa8.37□□□□□ -1.07
RFC1-208ENST00000504849 VASH1Q7L8A9 365 aaPredicted RBP8.37□□□□□ -1.07
RFC1-208ENST00000504849 IGF1RP08069 1367 aa8.36□□□□□ -1.07
RFC1-208ENST00000504849 PPP1R26Q5T8A7 1209 aaPredicted RBP8.36□□□□□ -1.07
RFC1-208ENST00000504849 ACDQ96AP0 544 aa8.36□□□□□ -1.07
RFC1-208ENST00000504849 INSM2Q96T92 566 aaPredicted RBP8.36□□□□□ -1.07
RFC1-208ENST00000504849 MBIPQ9NS73 344 aa8.36□□□□□ -1.07
RFC1-208ENST00000504849 NEDD1Q8NHV4 660 aa8.35□□□□□ -1.07
RFC1-208ENST00000504849 CCDC102AQ96A19 550 aa8.35□□□□□ -1.07
RFC1-208ENST00000504849 AGBL1Q96MI9 1066 aa8.35□□□□□ -1.07
RFC1-208ENST00000504849 MINK1Q8N4C8 1332 aaPredicted RBP8.33□□□□□ -1.08
RFC1-208ENST00000504849 COL8A1P27658 744 aa8.33□□□□□ -1.08
RFC1-208ENST00000504849 SNRPNP63162 240 aaKnown RBP8.33□□□□□ -1.08
RFC1-208ENST00000504849 SH3BP5LQ7L8J4 393 aa8.33□□□□□ -1.08
RFC1-208ENST00000504849 KRTAP19-1Q8IUB9 90 aa8.33□□□□□ -1.08
RFC1-208ENST00000504849 ZNF837Q96EG3 531 aaPredicted RBP8.32□□□□□ -1.08
RFC1-208ENST00000504849 PER1O15534 1290 aaPredicted RBP8.31□□□□□ -1.08
RFC1-208ENST00000504849 PLCB2Q00722 1185 aa8.31□□□□□ -1.08
RFC1-208ENST00000504849 FOXD4L5Q5VV16 416 aaPredicted RBP8.31□□□□□ -1.08
RFC1-208ENST00000504849 GPR25O00155 361 aa8.3□□□□□ -1.08
RFC1-208ENST00000504849 LRRC4BQ9NT99 713 aa8.3□□□□□ -1.08
RFC1-208ENST00000504849 PGPEP1Q9NXJ5 209 aa8.3□□□□□ -1.08
RFC1-208ENST00000504849 RELBQ01201 579 aa8.29□□□□□ -1.08
RFC1-208ENST00000504849 POLMQ9NP87 494 aaPredicted RBP8.29□□□□□ -1.08
RFC1-208ENST00000504849 BTBD11A6QL63 1104 aa8.28□□□□□ -1.08
RFC1-208ENST00000504849 PCDHB15Q9Y5E8 787 aa8.28□□□□□ -1.08
RFC1-208ENST00000504849 SSTR3P32745 418 aaPredicted RBP8.27□□□□□ -1.09
RFC1-208ENST00000504849 OIP5O43482 229 aa8.26□□□□□ -1.09
RFC1-208ENST00000504849 ERFEQ4G0M1 354 aa8.26□□□□□ -1.09
RFC1-208ENST00000504849 ZNF395Q9H8N7 513 aaPredicted RBP8.26□□□□□ -1.09
RFC1-208ENST00000504849 MAGEB6P1A0A0J9YX57 407 aa8.25□□□□□ -1.09
RFC1-208ENST00000504849 HRCP23327 699 aa8.25□□□□□ -1.09
RFC1-208ENST00000504849 GJA5P36382 358 aa8.25□□□□□ -1.09
RFC1-208ENST00000504849 RSBN1LQ6PCB5 846 aaPredicted RBP8.25□□□□□ -1.09
RFC1-208ENST00000504849 ALYREFQ86V81 257 aaKnown RBP8.25□□□□□ -1.09
RFC1-208ENST00000504849 TRIM22Q8IYM9 498 aa8.25□□□□□ -1.09
RFC1-208ENST00000504849 DBN1Q16643 649 aa8.24□□□□□ -1.09
RFC1-208ENST00000504849 KDF1Q8NAX2 398 aaPredicted RBP8.24□□□□□ -1.09
RFC1-208ENST00000504849 BCANQ96GW7 911 aa8.23□□□□□ -1.09
RFC1-208ENST00000504849 SHISA8B8ZZ34 492 aa8.22□□□□□ -1.09
RFC1-208ENST00000504849 FOXD4L6Q3SYB3 417 aaPredicted RBP8.22□□□□□ -1.09
RFC1-208ENST00000504849 ZMYM1Q5SVZ6 1142 aa8.22□□□□□ -1.09
RFC1-208ENST00000504849 NBPF14Q5TI25 921 aa8.22□□□□□ -1.09
RFC1-208ENST00000504849 FOXD4L3Q6VB84 417 aaPredicted RBP8.22□□□□□ -1.09
RFC1-208ENST00000504849 ARMC2Q8NEN0 867 aa8.22□□□□□ -1.09
RFC1-208ENST00000504849 GMCL1Q96IK5 515 aa8.22□□□□□ -1.09
RFC1-208ENST00000504849 CARD14Q9BXL6 1004 aa8.22□□□□□ -1.09
RFC1-208ENST00000504849 C1QTNF9BB2RNN3 333 aa8.21□□□□□ -1.1
RFC1-208ENST00000504849 HOXB4P17483 251 aaPredicted RBP8.21□□□□□ -1.1
RFC1-208ENST00000504849 C1orf229Q6ZS94 237 aaPredicted RBP8.2□□□□□ -1.1
RFC1-208ENST00000504849 LYSMD3Q7Z3D4 306 aa8.2□□□□□ -1.1
RFC1-208ENST00000504849 CD163Q86VB7 1156 aa8.2□□□□□ -1.1
RFC1-208ENST00000504849 KCTD15Q96SI1 283 aaPredicted RBP8.2□□□□□ -1.1
RFC1-208ENST00000504849 SUV39H2Q9H5I1 410 aa8.2□□□□□ -1.1
RFC1-208ENST00000504849 MKL2Q9ULH7 1088 aa8.2□□□□□ -1.1
RFC1-208ENST00000504849 CABLES1Q8TDN4 633 aa8.19□□□□□ -1.1
RFC1-208ENST00000504849 GTPBP3Q969Y2 492 aaKnown RBP8.19□□□□□ -1.1
RFC1-208ENST00000504849 ZBTB3Q9H5J0 574 aa8.19□□□□□ -1.1
RFC1-208ENST00000504849 INTS6LQ5JSJ4 861 aaKnown RBP8.18□□□□□ -1.1
RFC1-208ENST00000504849 SEMA6BQ9H3T3 888 aa8.18□□□□□ -1.1
RFC1-208ENST00000504849 RHOQP17081 205 aa8.17□□□□□ -1.1
RFC1-208ENST00000504849 CHRNA4P43681 627 aa8.17□□□□□ -1.1
RFC1-208ENST00000504849 PRPF38BQ5VTL8 546 aaKnown RBP8.17□□□□□ -1.1
RFC1-208ENST00000504849 LINC00114Q6XXX2 140 aa8.17□□□□□ -1.1
RFC1-208ENST00000504849 KRI1Q8N9T8 703 aaKnown RBP8.17□□□□□ -1.1
RFC1-208ENST00000504849 TBC1D2Q9BYX2 928 aa8.17□□□□□ -1.1
RFC1-208ENST00000504849 ADH1AP07327 375 aa8.16□□□□□ -1.1
RFC1-208ENST00000504849 MX2P20592 715 aa8.16□□□□□ -1.1
RFC1-208ENST00000504849 DHX9Q08211 1270 aaKnown RBP8.16□□□□□ -1.1
RFC1-208ENST00000504849 FOXR1Q6PIV2 292 aa8.16□□□□□ -1.1
RFC1-208ENST00000504849 OXCT2Q9BYC2 517 aaPredicted RBP8.16□□□□□ -1.1
RFC1-208ENST00000504849 ADD1P35611 737 aaKnown RBP8.15□□□□□ -1.1
RFC1-208ENST00000504849 PTGIRP43119 386 aa8.15□□□□□ -1.1
RFC1-208ENST00000504849 GRIN2CQ14957 1233 aa8.15□□□□□ -1.1
RFC1-208ENST00000504849 PRICKLE2Q7Z3G6 844 aa8.15□□□□□ -1.1
RFC1-208ENST00000504849 TMPRSS4Q9NRS4 437 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms