RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 RRS1Q15050 365 aaKnown RBP19.68■□□□□ 0.74
USP11-212ENST00000497179 USP21Q9UK80 565 aa19.68■□□□□ 0.74
USP11-212ENST00000497179 BLMP54132 1417 aaPredicted RBP19.68■□□□□ 0.74
USP11-212ENST00000497179 ZNF772Q68DY9 489 aaPredicted RBP19.67■□□□□ 0.74
USP11-212ENST00000497179 UNC5CLQ8IV45 518 aa19.67■□□□□ 0.74
USP11-212ENST00000497179 RGS17Q9UGC6 210 aaPredicted RBP19.67■□□□□ 0.74
USP11-212ENST00000497179 ATRNO75882 1429 aa19.67■□□□□ 0.74
USP11-212ENST00000497179 TNNT2P45379 298 aaPredicted RBP19.66■□□□□ 0.74
USP11-212ENST00000497179 IP6K1Q92551 441 aa19.66■□□□□ 0.74
USP11-212ENST00000497179 FLT4P35916 1363 aa19.66■□□□□ 0.74
USP11-212ENST00000497179 RGPD5Q99666 1765 aa19.65■□□□□ 0.74
USP11-212ENST00000497179 MAP2P11137 1827 aaKnown RBP19.65■□□□□ 0.74
USP11-212ENST00000497179 POLKQ9UBT6 870 aa19.65■□□□□ 0.74
USP11-212ENST00000497179 AXIN2Q9Y2T1 843 aa19.65■□□□□ 0.74
USP11-212ENST00000497179 EMILIN1Q9Y6C2 1016 aa19.65■□□□□ 0.74
USP11-212ENST00000497179 PARD3Q8TEW0 1356 aa19.65■□□□□ 0.74
USP11-212ENST00000497179 HOXC9P31274 260 aa19.64■□□□□ 0.73
USP11-212ENST00000497179 AMPHP49418 695 aa19.64■□□□□ 0.73
USP11-212ENST00000497179 CDK12Q9NYV4 1490 aaPredicted RBP19.63■□□□□ 0.73
USP11-212ENST00000497179 CNGB1Q14028 1251 aaPredicted RBP19.63■□□□□ 0.73
USP11-212ENST00000497179 INSRP06213 1382 aa19.62■□□□□ 0.73
USP11-212ENST00000497179 VPS72Q15906 364 aa19.62■□□□□ 0.73
USP11-212ENST00000497179 TRPC5Q9UL62 973 aaPredicted RBP19.62■□□□□ 0.73
USP11-212ENST00000497179 FAM208AQ9UK61 1670 aaKnown RBP19.62■□□□□ 0.73
USP11-212ENST00000497179 ERBB3P21860 1342 aa19.61■□□□□ 0.73
USP11-212ENST00000497179 WDR17Q8IZU2 1322 aa19.6■□□□□ 0.73
USP11-212ENST00000497179 STRN4Q9NRL3 753 aa19.6■□□□□ 0.73
USP11-212ENST00000497179 GLI3P10071 1580 aa19.6■□□□□ 0.73
USP11-212ENST00000497179 EVA1CP58658 441 aa19.59■□□□□ 0.73
USP11-212ENST00000497179 POTEAQ6S8J7 498 aa19.59■□□□□ 0.73
USP11-212ENST00000497179 ANKRD24Q8TF21 1146 aa19.59■□□□□ 0.73
USP11-212ENST00000497179 QTRT2Q9H974 415 aaKnown RBP19.59■□□□□ 0.73
USP11-212ENST00000497179 CRB1P82279 1406 aa19.59■□□□□ 0.73
USP11-212ENST00000497179 PPM1GO15355 546 aaPredicted RBP19.58■□□□□ 0.72
USP11-212ENST00000497179 HSP90AB2PQ58FF8 381 aa19.58■□□□□ 0.72
USP11-212ENST00000497179 LARP1Q6PKG0 1096 aaKnown RBP19.58■□□□□ 0.72
USP11-212ENST00000497179 SPATA31A5Q5VU36 1347 aa19.57■□□□□ 0.72
USP11-212ENST00000497179 SPATA31A7Q8IWB4 1347 aa19.57■□□□□ 0.72
USP11-212ENST00000497179 PPP2R1AP30153 589 aa19.57■□□□□ 0.72
USP11-212ENST00000497179 RALBP1Q15311 655 aa19.57■□□□□ 0.72
USP11-212ENST00000497179 SPATA31A1Q5TZJ5 1347 aa19.56■□□□□ 0.72
USP11-212ENST00000497179 MTHFSP49914 203 aa19.56■□□□□ 0.72
USP11-212ENST00000497179 CSB-PGBD3P0DP91 1061 aa19.55■□□□□ 0.72
USP11-212ENST00000497179 RBM6P78332 1123 aaKnown RBP19.55■□□□□ 0.72
USP11-212ENST00000497179 GJD4Q96KN9 370 aaPredicted RBP19.55■□□□□ 0.72
USP11-212ENST00000497179 COL3A1P02461 1466 aaPredicted RBP19.54■□□□□ 0.72
USP11-212ENST00000497179 LTV1Q96GA3 475 aaPredicted RBP19.54■□□□□ 0.72
USP11-212ENST00000497179 PRKRIP1Q9H875 184 aaPredicted RBP19.54■□□□□ 0.72
USP11-212ENST00000497179 CCDC9Q9Y3X0 531 aaKnown RBP19.54■□□□□ 0.72
USP11-212ENST00000497179 TOM1L2Q6ZVM7 507 aa19.53■□□□□ 0.72
USP11-212ENST00000497179 CARD10Q9BWT7 1032 aa19.53■□□□□ 0.72
USP11-212ENST00000497179 WNK3Q9BYP7 1800 aa19.53■□□□□ 0.72
USP11-212ENST00000497179 RXRBP28702 533 aa19.51■□□□□ 0.71
USP11-212ENST00000497179 EIF4A2Q14240 407 aaKnown RBP19.51■□□□□ 0.71
USP11-212ENST00000497179 NLRP2Q9NX02 1062 aa19.51■□□□□ 0.71
USP11-212ENST00000497179 THSD7AQ9UPZ6 1657 aa19.51■□□□□ 0.71
USP11-212ENST00000497179 RGPD2P0DJD1 1756 aa19.51■□□□□ 0.71
USP11-212ENST00000497179 NCAPD2Q15021 1401 aa19.51■□□□□ 0.71
USP11-212ENST00000497179 MYBBP1AQ9BQG0 1328 aaKnown RBP19.51■□□□□ 0.71
USP11-212ENST00000497179 TCP11L2Q8N4U5 519 aa19.5■□□□□ 0.71
USP11-212ENST00000497179 THRAP3Q9Y2W1 955 aaKnown RBP19.5■□□□□ 0.71
USP11-212ENST00000497179 RGPD1P0DJD0 1748 aa19.49■□□□□ 0.71
USP11-212ENST00000497179 BARGINQ6ZT62 677 aa19.49■□□□□ 0.71
USP11-212ENST00000497179 NBPF6Q5VWK0 638 aa19.48■□□□□ 0.71
USP11-212ENST00000497179 NBPF4Q96M43 638 aa19.48■□□□□ 0.71
USP11-212ENST00000497179 USP35Q9P2H5 1018 aa19.48■□□□□ 0.71
USP11-212ENST00000497179 DISP2A7MBM2 1401 aa19.48■□□□□ 0.71
USP11-212ENST00000497179 RGS12O14924 1447 aa19.48■□□□□ 0.71
USP11-212ENST00000497179 ONECUT3O60422 494 aaPredicted RBP19.47■□□□□ 0.71
USP11-212ENST00000497179 IL13P35225 146 aa19.47■□□□□ 0.71
USP11-212ENST00000497179 FAM98CQ17RN3 349 aaKnown RBP19.47■□□□□ 0.71
USP11-212ENST00000497179 CFAP53Q96M91 514 aa19.47■□□□□ 0.71
USP11-212ENST00000497179 PARP4Q9UKK3 1724 aaKnown RBP19.46■□□□□ 0.71
USP11-212ENST00000497179 ANP32CO43423 234 aa19.46■□□□□ 0.71
USP11-212ENST00000497179 IGSF1Q8N6C5 1336 aa19.46■□□□□ 0.71
USP11-212ENST00000497179 DIAPH1O60610 1272 aaKnown RBP19.45■□□□□ 0.7
USP11-212ENST00000497179 EYA1Q99502 592 aa19.45■□□□□ 0.7
USP11-212ENST00000497179 LRRC37A3O60309 1634 aa19.44■□□□□ 0.7
USP11-212ENST00000497179 USHBP1Q8N6Y0 703 aa19.43■□□□□ 0.7
USP11-212ENST00000497179 CDCA7Q9BWT1 371 aaPredicted RBP19.43■□□□□ 0.7
USP11-212ENST00000497179 MEGF6O75095 1541 aa19.42■□□□□ 0.7
USP11-212ENST00000497179 IL2RBP14784 551 aa19.41■□□□□ 0.7
USP11-212ENST00000497179 SEPT12Q8IYM1 358 aa19.41■□□□□ 0.7
USP11-212ENST00000497179 KDRP35968 1356 aa19.41■□□□□ 0.7
USP11-212ENST00000497179 PLEKHG2Q9H7P9 1386 aa19.4■□□□□ 0.7
USP11-212ENST00000497179 OVOS2A0A0G2JMS6 1433 aa19.4■□□□□ 0.7
USP11-212ENST00000497179 TNS2Q63HR2 1409 aa19.4■□□□□ 0.7
USP11-212ENST00000497179 A0A0G2JS52 829 aa19.39■□□□□ 0.69
USP11-212ENST00000497179 MYT1Q01538 1121 aa19.39■□□□□ 0.69
USP11-212ENST00000497179 BRWD3Q6RI45 1802 aa19.39■□□□□ 0.69
USP11-212ENST00000497179 NUDCQ9Y266 331 aa19.38■□□□□ 0.69
USP11-212ENST00000497179 PKD1L3Q7Z443 1732 aa19.37■□□□□ 0.69
USP11-212ENST00000497179 AEBP1Q8IUX7 1158 aa19.37■□□□□ 0.69
USP11-212ENST00000497179 RAPGEF4Q8WZA2 1011 aa19.37■□□□□ 0.69
USP11-212ENST00000497179 U2SURPO15042 1029 aaKnown RBP19.36■□□□□ 0.69
USP11-212ENST00000497179 DIEXFQ68CQ4 756 aaKnown RBP19.36■□□□□ 0.69
USP11-212ENST00000497179 SULT6B1Q6IMI4 303 aa19.36■□□□□ 0.69
USP11-212ENST00000497179 SHANK3Q9BYB0 1731 aa19.35■□□□□ 0.69
USP11-212ENST00000497179 TATP17735 454 aaPredicted RBP19.35■□□□□ 0.69
USP11-212ENST00000497179 DDB1Q16531 1140 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms