RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 GPKOWQ92917 476 aaPredicted RBP eCLIP8.34□□□□□ -1.07
PHC3-216ENST00000497171 CARD14Q9BXL6 1004 aa8.34□□□□□ -1.07
PHC3-216ENST00000497171 CDC14CA4D256 554 aa8.33□□□□□ -1.08
PHC3-216ENST00000497171 FOXK2Q01167 660 aa8.33□□□□□ -1.08
PHC3-216ENST00000497171 GPAT2Q6NUI2 795 aa8.33□□□□□ -1.08
PHC3-216ENST00000497171 CCDC155Q8N6L0 562 aa8.33□□□□□ -1.08
PHC3-216ENST00000497171 PER1O15534 1290 aaPredicted RBP8.32□□□□□ -1.08
PHC3-216ENST00000497171 IRS1P35568 1242 aa8.32□□□□□ -1.08
PHC3-216ENST00000497171 ZNF385CQ66K41 422 aaPredicted RBP8.32□□□□□ -1.08
PHC3-216ENST00000497171 SV2AQ7L0J3 742 aa8.32□□□□□ -1.08
PHC3-216ENST00000497171 SH3RF1Q7Z6J0 888 aa8.32□□□□□ -1.08
PHC3-216ENST00000497171 SCARF2Q96GP6 870 aaPredicted RBP8.32□□□□□ -1.08
PHC3-216ENST00000497171 SPINT1O43278 529 aa8.31□□□□□ -1.08
PHC3-216ENST00000497171 DHX9Q08211 1270 aaKnown RBP8.31□□□□□ -1.08
PHC3-216ENST00000497171 SH3BP5LQ7L8J4 393 aa8.31□□□□□ -1.08
PHC3-216ENST00000497171 PARP9Q8IXQ6 854 aa8.31□□□□□ -1.08
PHC3-216ENST00000497171 CDV3Q9UKY7 258 aaKnown RBP8.31□□□□□ -1.08
PHC3-216ENST00000497171 ZMYND10O75800 440 aa8.3□□□□□ -1.08
PHC3-216ENST00000497171 ITGA6P23229 1130 aa8.3□□□□□ -1.08
PHC3-216ENST00000497171 MAP3K10Q02779 954 aa8.3□□□□□ -1.08
PHC3-216ENST00000497171 PPP1R26Q5T8A7 1209 aaPredicted RBP8.3□□□□□ -1.08
PHC3-216ENST00000497171 SLC10A4Q96EP9 437 aa8.3□□□□□ -1.08
PHC3-216ENST00000497171 VWA5B2Q8N398 1253 aa8.29□□□□□ -1.08
PHC3-216ENST00000497171 SLURP2P0DP57 97 aa8.28□□□□□ -1.08
PHC3-216ENST00000497171 Q6ZVU0 165 aa8.28□□□□□ -1.08
PHC3-216ENST00000497171 SLC35F4A4IF30 521 aa8.27□□□□□ -1.09
PHC3-216ENST00000497171 CBLBQ13191 982 aa8.27□□□□□ -1.09
PHC3-216ENST00000497171 TUSC1Q2TAM9 212 aa8.27□□□□□ -1.09
PHC3-216ENST00000497171 ERFEQ4G0M1 354 aa8.27□□□□□ -1.09
PHC3-216ENST00000497171 RNFT1Q5M7Z0 435 aa8.27□□□□□ -1.09
PHC3-216ENST00000497171 POLMQ9NP87 494 aaPredicted RBP8.27□□□□□ -1.09
PHC3-216ENST00000497171 ENAMQ9NRM1 1142 aa8.27□□□□□ -1.09
PHC3-216ENST00000497171 QPCTQ16769 361 aa8.26□□□□□ -1.09
PHC3-216ENST00000497171 ARHGAP9Q9BRR9 750 aa8.26□□□□□ -1.09
PHC3-216ENST00000497171 ZBTB33Q86T24 672 aa8.25□□□□□ -1.09
PHC3-216ENST00000497171 ZC3H15Q8WU90 426 aaKnown RBP8.25□□□□□ -1.09
PHC3-216ENST00000497171 KCTD15Q96SI1 283 aaPredicted RBP8.25□□□□□ -1.09
PHC3-216ENST00000497171 ARHGEF15O94989 841 aa8.24□□□□□ -1.09
PHC3-216ENST00000497171 RELBQ01201 579 aa8.24□□□□□ -1.09
PHC3-216ENST00000497171 MYSM1Q5VVJ2 828 aa8.24□□□□□ -1.09
PHC3-216ENST00000497171 WHAMMQ8TF30 809 aa8.24□□□□□ -1.09
PHC3-216ENST00000497171 LIMD1Q9UGP4 676 aa8.24□□□□□ -1.09
PHC3-216ENST00000497171 LILRB3O75022 631 aa8.23□□□□□ -1.09
PHC3-216ENST00000497171 ADAMTS2O95450 1211 aa8.23□□□□□ -1.09
PHC3-216ENST00000497171 PDXDC2PQ6P474 469 aa8.23□□□□□ -1.09
PHC3-216ENST00000497171 AK7Q96M32 723 aa8.23□□□□□ -1.09
PHC3-216ENST00000497171 INSM2Q96T92 566 aaPredicted RBP8.23□□□□□ -1.09
PHC3-216ENST00000497171 TRIM66O15016 1216 aa8.22□□□□□ -1.09
PHC3-216ENST00000497171 CTSOP43234 321 aaPredicted RBP8.22□□□□□ -1.09
PHC3-216ENST00000497171 TRIM52Q96A61 297 aa8.22□□□□□ -1.09
PHC3-216ENST00000497171 PHF20L1A8MW92 1017 aa8.21□□□□□ -1.1
PHC3-216ENST00000497171 SRSF11Q05519 484 aaKnown RBP8.21□□□□□ -1.1
PHC3-216ENST00000497171 PODNQ7Z5L7 613 aa8.21□□□□□ -1.1
PHC3-216ENST00000497171 AGBL1Q96MI9 1066 aa8.21□□□□□ -1.1
PHC3-216ENST00000497171 CLK2P49760 499 aaKnown RBP8.2□□□□□ -1.1
PHC3-216ENST00000497171 NBPF20Q3BBV1 942 aa8.2□□□□□ -1.1
PHC3-216ENST00000497171 FOXR1Q6PIV2 292 aa8.2□□□□□ -1.1
PHC3-216ENST00000497171 RSPH6AQ9H0K4 717 aa8.2□□□□□ -1.1
PHC3-216ENST00000497171 ZC3H4Q9UPT8 1303 aaKnown RBP8.2□□□□□ -1.1
PHC3-216ENST00000497171 INTS6LQ5JSJ4 861 aaKnown RBP8.19□□□□□ -1.1
PHC3-216ENST00000497171 PNMA1Q8ND90 353 aa8.19□□□□□ -1.1
PHC3-216ENST00000497171 RNF217Q8TC41 542 aa8.19□□□□□ -1.1
PHC3-216ENST00000497171 FKBPLQ9UIM3 349 aa8.19□□□□□ -1.1
PHC3-216ENST00000497171 MSTNO14793 375 aa8.18□□□□□ -1.1
PHC3-216ENST00000497171 PTK2Q05397 1052 aa8.18□□□□□ -1.1
PHC3-216ENST00000497171 RTL5Q5HYW3 569 aaPredicted RBP8.18□□□□□ -1.1
PHC3-216ENST00000497171 LYPD4Q6UWN0 246 aa8.17□□□□□ -1.1
PHC3-216ENST00000497171 ZNF395Q9H8N7 513 aaPredicted RBP8.17□□□□□ -1.1
PHC3-216ENST00000497171 SLC24A1O60721 1099 aa8.16□□□□□ -1.1
PHC3-216ENST00000497171 ADH1AP07327 375 aa8.16□□□□□ -1.1
PHC3-216ENST00000497171 CELA2BP08218 269 aaPredicted RBP8.16□□□□□ -1.1
PHC3-216ENST00000497171 LYSMD3Q7Z3D4 306 aa8.16□□□□□ -1.1
PHC3-216ENST00000497171 GALNT6Q8NCL4 622 aa8.16□□□□□ -1.1
PHC3-216ENST00000497171 GMCL1Q96IK5 515 aa8.16□□□□□ -1.1
PHC3-216ENST00000497171 BEND7Q8N7W2 519 aaPredicted RBP8.15□□□□□ -1.1
PHC3-216ENST00000497171 NEDD1Q8NHV4 660 aa8.15□□□□□ -1.1
PHC3-216ENST00000497171 GPSM3Q9Y4H4 160 aa8.15□□□□□ -1.1
PHC3-216ENST00000497171 SENP3-EIF4A1A0A087X0R7 540 aa8.14□□□□□ -1.11
PHC3-216ENST00000497171 RAB15P59190 212 aa8.14□□□□□ -1.11
PHC3-216ENST00000497171 MBIPQ9NS73 344 aa8.14□□□□□ -1.11
PHC3-216ENST00000497171 CTDSPL2Q05D32 466 aa8.13□□□□□ -1.11
PHC3-216ENST00000497171 PDE4DQ08499 809 aa8.13□□□□□ -1.11
PHC3-216ENST00000497171 ZNF784Q8NCA9 323 aaPredicted RBP8.13□□□□□ -1.11
PHC3-216ENST00000497171 ATP1B4Q9UN42 357 aaPredicted RBP8.13□□□□□ -1.11
PHC3-216ENST00000497171 PTGIRP43119 386 aa8.12□□□□□ -1.11
PHC3-216ENST00000497171 PLA2G4EQ3MJ16 856 aa8.12□□□□□ -1.11
PHC3-216ENST00000497171 ADAM32Q8TC27 787 aa8.12□□□□□ -1.11
PHC3-216ENST00000497171 POLR3EQ9NVU0 708 aa8.12□□□□□ -1.11
PHC3-216ENST00000497171 NSFL1CQ9UNZ2 370 aaKnown RBP8.12□□□□□ -1.11
PHC3-216ENST00000497171 DZIP3Q86Y13 1208 aaKnown RBP8.11□□□□□ -1.11
PHC3-216ENST00000497171 DCAF5Q96JK2 942 aa8.11□□□□□ -1.11
PHC3-216ENST00000497171 TRERF1Q96PN7 1200 aa8.11□□□□□ -1.11
PHC3-216ENST00000497171 SPOCK3Q9BQ16 436 aa8.11□□□□□ -1.11
PHC3-216ENST00000497171 H7C1W4 665 aa8.1□□□□□ -1.11
PHC3-216ENST00000497171 ADAM23O75077 832 aa8.1□□□□□ -1.11
PHC3-216ENST00000497171 GAS6Q14393 721 aa8.1□□□□□ -1.11
PHC3-216ENST00000497171 FOXD4L5Q5VV16 416 aaPredicted RBP8.1□□□□□ -1.11
PHC3-216ENST00000497171 RIPOR1Q6ZS17 1223 aa8.1□□□□□ -1.11
PHC3-216ENST00000497171 PRICKLE2Q7Z3G6 844 aa8.1□□□□□ -1.11
PHC3-216ENST00000497171 TRIM22Q8IYM9 498 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms