RNA–Protein interactions for RNA: ENST00000494920.1

KDM1A-205, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-205ENST00000494920 CC2D1BQ5T0F9 858 aaKnown RBP15.07■□□□□ 0
KDM1A-205ENST00000494920 MEX3CQ5U5Q3 659 aaKnown RBP15.07■□□□□ 0
KDM1A-205ENST00000494920 BLMP54132 1417 aaPredicted RBP15.07■□□□□ 0
KDM1A-205ENST00000494920 CDK12Q9NYV4 1490 aaPredicted RBP15.07■□□□□ 0
KDM1A-205ENST00000494920 FAM208AQ9UK61 1670 aaKnown RBP15.06■□□□□ 0
KDM1A-205ENST00000494920 MORC1Q86VD1 984 aa15.06■□□□□ 0
KDM1A-205ENST00000494920 NGLY1Q96IV0 654 aa15.06■□□□□ 0
KDM1A-205ENST00000494920 POLKQ9UBT6 870 aa15.06■□□□□ 0
KDM1A-205ENST00000494920 EMILIN1Q9Y6C2 1016 aa15.06■□□□□ 0
KDM1A-205ENST00000494920 GLI3P10071 1580 aa15.06■□□□□ 0
KDM1A-205ENST00000494920 HOXC9P31274 260 aa15.05■□□□□ -0
KDM1A-205ENST00000494920 UNC5CLQ8IV45 518 aa15.05■□□□□ -0
KDM1A-205ENST00000494920 IP6K1Q92551 441 aa15.05■□□□□ -0
KDM1A-205ENST00000494920 BTG4Q9NY30 223 aa15.05■□□□□ -0
KDM1A-205ENST00000494920 FLT4P35916 1363 aa15.05■□□□□ -0
KDM1A-205ENST00000494920 COL3A1P02461 1466 aaPredicted RBP15.05■□□□□ -0
KDM1A-205ENST00000494920 RGPD2P0DJD1 1756 aa15.04■□□□□ -0
KDM1A-205ENST00000494920 WNK3Q9BYP7 1800 aa15.03■□□□□ -0
KDM1A-205ENST00000494920 INSRP06213 1382 aa15.03■□□□□ -0
KDM1A-205ENST00000494920 ERBB3P21860 1342 aa15.03■□□□□ -0
KDM1A-205ENST00000494920 USP21Q9UK80 565 aa15.03■□□□□ -0
KDM1A-205ENST00000494920 EP400Q96L91 3159 aa15.02■□□□□ -0
KDM1A-205ENST00000494920 NCAPD2Q15021 1401 aa15.02■□□□□ -0
KDM1A-205ENST00000494920 TNNT2P45379 298 aaPredicted RBP15.02■□□□□ -0
KDM1A-205ENST00000494920 POTEAQ6S8J7 498 aa15.02■□□□□ -0
KDM1A-205ENST00000494920 RGPD1P0DJD0 1748 aa15.02□□□□□ -0.01
KDM1A-205ENST00000494920 WDR17Q8IZU2 1322 aa15.01□□□□□ -0.01
KDM1A-205ENST00000494920 VPS72Q15906 364 aa15.01□□□□□ -0.01
KDM1A-205ENST00000494920 HSP90AB2PQ58FF8 381 aa15.01□□□□□ -0.01
KDM1A-205ENST00000494920 ZNF772Q68DY9 489 aaPredicted RBP15.01□□□□□ -0.01
KDM1A-205ENST00000494920 THSD7AQ9UPZ6 1657 aa15□□□□□ -0.01
KDM1A-205ENST00000494920 CRB1P82279 1406 aa15□□□□□ -0.01
KDM1A-205ENST00000494920 SPATA31A5Q5VU36 1347 aa14.99□□□□□ -0.01
KDM1A-205ENST00000494920 SPATA31A7Q8IWB4 1347 aa14.99□□□□□ -0.01
KDM1A-205ENST00000494920 ZBTB7CA1YPR0 619 aa14.99□□□□□ -0.01
KDM1A-205ENST00000494920 PPP2R1AP30153 589 aa14.99□□□□□ -0.01
KDM1A-205ENST00000494920 AMPHP49418 695 aa14.99□□□□□ -0.01
KDM1A-205ENST00000494920 LARP1Q6PKG0 1096 aaKnown RBP14.99□□□□□ -0.01
KDM1A-205ENST00000494920 TRPC5Q9UL62 973 aaPredicted RBP14.99□□□□□ -0.01
KDM1A-205ENST00000494920 SPATA31A1Q5TZJ5 1347 aa14.98□□□□□ -0.01
KDM1A-205ENST00000494920 ANKRD24Q8TF21 1146 aa14.98□□□□□ -0.01
KDM1A-205ENST00000494920 PHF23Q9BUL5 403 aaPredicted RBP14.98□□□□□ -0.01
KDM1A-205ENST00000494920 PRKRIP1Q9H875 184 aaPredicted RBP14.98□□□□□ -0.01
KDM1A-205ENST00000494920 DISP2A7MBM2 1401 aa14.98□□□□□ -0.01
KDM1A-205ENST00000494920 MTHFSP49914 203 aa14.97□□□□□ -0.01
KDM1A-205ENST00000494920 RALBP1Q15311 655 aa14.97□□□□□ -0.01
KDM1A-205ENST00000494920 QTRT2Q9H974 415 aaKnown RBP14.97□□□□□ -0.01
KDM1A-205ENST00000494920 GJD4Q96KN9 370 aaPredicted RBP14.96□□□□□ -0.01
KDM1A-205ENST00000494920 STRN4Q9NRL3 753 aa14.96□□□□□ -0.01
KDM1A-205ENST00000494920 PARP4Q9UKK3 1724 aaKnown RBP14.96□□□□□ -0.01
KDM1A-205ENST00000494920 CNGB1Q14028 1251 aaPredicted RBP14.95□□□□□ -0.02
KDM1A-205ENST00000494920 EIF4A2Q14240 407 aaKnown RBP14.95□□□□□ -0.02
KDM1A-205ENST00000494920 CARD10Q9BWT7 1032 aa14.95□□□□□ -0.02
KDM1A-205ENST00000494920 ONECUT3O60422 494 aaPredicted RBP14.94□□□□□ -0.02
KDM1A-205ENST00000494920 RBM6P78332 1123 aaKnown RBP14.94□□□□□ -0.02
KDM1A-205ENST00000494920 BRWD3Q6RI45 1802 aa14.94□□□□□ -0.02
KDM1A-205ENST00000494920 RGS12O14924 1447 aa14.93□□□□□ -0.02
KDM1A-205ENST00000494920 LRRC37A3O60309 1634 aa14.93□□□□□ -0.02
KDM1A-205ENST00000494920 SHANK3Q9BYB0 1731 aa14.93□□□□□ -0.02
KDM1A-205ENST00000494920 PPM1GO15355 546 aaPredicted RBP14.93□□□□□ -0.02
KDM1A-205ENST00000494920 IL13P35225 146 aa14.93□□□□□ -0.02
KDM1A-205ENST00000494920 IGSF1Q8N6C5 1336 aa14.92□□□□□ -0.02
KDM1A-205ENST00000494920 MYBBP1AQ9BQG0 1328 aaKnown RBP14.92□□□□□ -0.02
KDM1A-205ENST00000494920 EVA1CP58658 441 aa14.92□□□□□ -0.02
KDM1A-205ENST00000494920 NBPF6Q5VWK0 638 aa14.92□□□□□ -0.02
KDM1A-205ENST00000494920 BARGINQ6ZT62 677 aa14.92□□□□□ -0.02
KDM1A-205ENST00000494920 NBPF4Q96M43 638 aa14.92□□□□□ -0.02
KDM1A-205ENST00000494920 KDRP35968 1356 aa14.92□□□□□ -0.02
KDM1A-205ENST00000494920 TOM1L2Q6ZVM7 507 aa14.91□□□□□ -0.02
KDM1A-205ENST00000494920 TCP11L2Q8N4U5 519 aa14.91□□□□□ -0.02
KDM1A-205ENST00000494920 LTV1Q96GA3 475 aaPredicted RBP14.91□□□□□ -0.02
KDM1A-205ENST00000494920 THRAP3Q9Y2W1 955 aaKnown RBP14.91□□□□□ -0.02
KDM1A-205ENST00000494920 PKD1L3Q7Z443 1732 aa14.91□□□□□ -0.02
KDM1A-205ENST00000494920 MEGF6O75095 1541 aa14.91□□□□□ -0.02
KDM1A-205ENST00000494920 CSB-PGBD3P0DP91 1061 aa14.9□□□□□ -0.02
KDM1A-205ENST00000494920 EYA1Q99502 592 aa14.9□□□□□ -0.02
KDM1A-205ENST00000494920 RXRBP28702 533 aa14.89□□□□□ -0.03
KDM1A-205ENST00000494920 NLRP2Q9NX02 1062 aa14.89□□□□□ -0.03
KDM1A-205ENST00000494920 PLEKHG2Q9H7P9 1386 aa14.88□□□□□ -0.03
KDM1A-205ENST00000494920 FAM98CQ17RN3 349 aaKnown RBP14.88□□□□□ -0.03
KDM1A-205ENST00000494920 OVOS2A0A0G2JMS6 1433 aa14.88□□□□□ -0.03
KDM1A-205ENST00000494920 TNS2Q63HR2 1409 aa14.87□□□□□ -0.03
KDM1A-205ENST00000494920 DIAPH1O60610 1272 aaKnown RBP14.87□□□□□ -0.03
KDM1A-205ENST00000494920 USHBP1Q8N6Y0 703 aa14.87□□□□□ -0.03
KDM1A-205ENST00000494920 USP35Q9P2H5 1018 aa14.87□□□□□ -0.03
KDM1A-205ENST00000494920 CCDC9Q9Y3X0 531 aaKnown RBP14.87□□□□□ -0.03
KDM1A-205ENST00000494920 AEBP1Q8IUX7 1158 aa14.85□□□□□ -0.03
KDM1A-205ENST00000494920 CDCA7Q9BWT1 371 aaPredicted RBP14.85□□□□□ -0.03
KDM1A-205ENST00000494920 ANP32CO43423 234 aa14.84□□□□□ -0.03
KDM1A-205ENST00000494920 SEPT12Q8IYM1 358 aa14.84□□□□□ -0.03
KDM1A-205ENST00000494920 CFAP53Q96M91 514 aa14.84□□□□□ -0.03
KDM1A-205ENST00000494920 IL2RBP14784 551 aa14.83□□□□□ -0.04
KDM1A-205ENST00000494920 CCDC184Q52MB2 194 aa14.83□□□□□ -0.04
KDM1A-205ENST00000494920 ILDR2Q71H61 639 aa14.83□□□□□ -0.04
KDM1A-205ENST00000494920 SBF2Q86WG5 1849 aa14.81□□□□□ -0.04
KDM1A-205ENST00000494920 DIEXFQ68CQ4 756 aaKnown RBP14.81□□□□□ -0.04
KDM1A-205ENST00000494920 SULT6B1Q6IMI4 303 aa14.81□□□□□ -0.04
KDM1A-205ENST00000494920 BCL9O00512 1426 aa14.81□□□□□ -0.04
KDM1A-205ENST00000494920 RSPH6AQ9H0K4 717 aa14.8□□□□□ -0.04
KDM1A-205ENST00000494920 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.79□□□□□ -0.041e-7■■□□□ 11.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms