RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 KIF24Q5T7B8 1368 aa19.69■□□□□ 0.74
BRCA1-223ENST00000494123 PHF23Q9BUL5 403 aaPredicted RBP19.69■□□□□ 0.74
BRCA1-223ENST00000494123 RGPD5Q99666 1765 aa19.69■□□□□ 0.74
BRCA1-223ENST00000494123 PEAK1Q9H792 1746 aa19.69■□□□□ 0.74
BRCA1-223ENST00000494123 SLIT2O94813 1529 aa19.69■□□□□ 0.74
BRCA1-223ENST00000494123 ANP32CO43423 234 aa19.69■□□□□ 0.74
BRCA1-223ENST00000494123 HOXC9P31274 260 aa19.69■□□□□ 0.74
BRCA1-223ENST00000494123 IP6K1Q92551 441 aa19.69■□□□□ 0.74
BRCA1-223ENST00000494123 CAMTA1Q9Y6Y1 1673 aa19.68■□□□□ 0.74
BRCA1-223ENST00000494123 FNBP4Q8N3X1 1017 aaPredicted RBP19.68■□□□□ 0.74
BRCA1-223ENST00000494123 PRKRIP1Q9H875 184 aaPredicted RBP19.68■□□□□ 0.74
BRCA1-223ENST00000494123 USP21Q9UK80 565 aa19.68■□□□□ 0.74
BRCA1-223ENST00000494123 BLMP54132 1417 aaPredicted RBP19.67■□□□□ 0.74
BRCA1-223ENST00000494123 SMG6Q86US8 1419 aaKnown RBP19.67■□□□□ 0.74
BRCA1-223ENST00000494123 PPP2R1AP30153 589 aa19.67■□□□□ 0.74
BRCA1-223ENST00000494123 EVA1CP58658 441 aa19.67■□□□□ 0.74
BRCA1-223ENST00000494123 AXIN2Q9Y2T1 843 aa19.67■□□□□ 0.74
BRCA1-223ENST00000494123 MTHFSP49914 203 aa19.66■□□□□ 0.74
BRCA1-223ENST00000494123 STRN4Q9NRL3 753 aa19.66■□□□□ 0.74
BRCA1-223ENST00000494123 NRAPQ86VF7 1730 aa19.66■□□□□ 0.74
BRCA1-223ENST00000494123 UNC5CLQ8IV45 518 aa19.65■□□□□ 0.74
BRCA1-223ENST00000494123 COL5A2P05997 1499 aaPredicted RBP19.65■□□□□ 0.74
BRCA1-223ENST00000494123 CDK12Q9NYV4 1490 aaPredicted RBP19.65■□□□□ 0.74
BRCA1-223ENST00000494123 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.65■□□□□ 0.74
BRCA1-223ENST00000494123 DIEXFQ68CQ4 756 aaKnown RBP19.65■□□□□ 0.74
BRCA1-223ENST00000494123 BCL9LQ86UU0 1499 aa19.64■□□□□ 0.73
BRCA1-223ENST00000494123 CSB-PGBD3P0DP91 1061 aa19.64■□□□□ 0.73
BRCA1-223ENST00000494123 HSP90AB2PQ58FF8 381 aa19.64■□□□□ 0.73
BRCA1-223ENST00000494123 ZNF772Q68DY9 489 aaPredicted RBP19.64■□□□□ 0.73
BRCA1-223ENST00000494123 LTV1Q96GA3 475 aaPredicted RBP19.64■□□□□ 0.73
BRCA1-223ENST00000494123 MYBBP1AQ9BQG0 1328 aaKnown RBP19.64■□□□□ 0.73
BRCA1-223ENST00000494123 INSRP06213 1382 aa19.64■□□□□ 0.73
BRCA1-223ENST00000494123 ANKRD24Q8TF21 1146 aa19.63■□□□□ 0.73
BRCA1-223ENST00000494123 CFAP53Q96M91 514 aa19.62■□□□□ 0.73
BRCA1-223ENST00000494123 CCDC9Q9Y3X0 531 aaKnown RBP19.62■□□□□ 0.73
BRCA1-223ENST00000494123 ERBB3P21860 1342 aa19.62■□□□□ 0.73
BRCA1-223ENST00000494123 WDR17Q8IZU2 1322 aa19.61■□□□□ 0.73
BRCA1-223ENST00000494123 FAM208AQ9UK61 1670 aaKnown RBP19.6■□□□□ 0.73
BRCA1-223ENST00000494123 TOM1L2Q6ZVM7 507 aa19.6■□□□□ 0.73
BRCA1-223ENST00000494123 TRPC5Q9UL62 973 aaPredicted RBP19.6■□□□□ 0.73
BRCA1-223ENST00000494123 LARP1Q6PKG0 1096 aaKnown RBP19.59■□□□□ 0.73
BRCA1-223ENST00000494123 VPS72Q15906 364 aa19.58■□□□□ 0.73
BRCA1-223ENST00000494123 CRB1P82279 1406 aa19.58■□□□□ 0.72
BRCA1-223ENST00000494123 QTRT2Q9H974 415 aaKnown RBP19.58■□□□□ 0.72
BRCA1-223ENST00000494123 NLRP2Q9NX02 1062 aa19.58■□□□□ 0.72
BRCA1-223ENST00000494123 ATRNO75882 1429 aa19.57■□□□□ 0.72
BRCA1-223ENST00000494123 EIF4A2Q14240 407 aaKnown RBP19.56■□□□□ 0.72
BRCA1-223ENST00000494123 USP35Q9P2H5 1018 aa19.56■□□□□ 0.72
BRCA1-223ENST00000494123 DIAPH1O60610 1272 aaKnown RBP19.55■□□□□ 0.72
BRCA1-223ENST00000494123 RGS17Q9UGC6 210 aaPredicted RBP19.55■□□□□ 0.72
BRCA1-223ENST00000494123 RGPD2P0DJD1 1756 aa19.55■□□□□ 0.72
BRCA1-223ENST00000494123 SPATA31A5Q5VU36 1347 aa19.55■□□□□ 0.72
BRCA1-223ENST00000494123 SPATA31A7Q8IWB4 1347 aa19.55■□□□□ 0.72
BRCA1-223ENST00000494123 COL3A1P02461 1466 aaPredicted RBP19.54■□□□□ 0.72
BRCA1-223ENST00000494123 GJD4Q96KN9 370 aaPredicted RBP19.54■□□□□ 0.72
BRCA1-223ENST00000494123 CARD10Q9BWT7 1032 aa19.54■□□□□ 0.72
BRCA1-223ENST00000494123 SPATA31A1Q5TZJ5 1347 aa19.53■□□□□ 0.72
BRCA1-223ENST00000494123 IL13P35225 146 aa19.52■□□□□ 0.72
BRCA1-223ENST00000494123 NUDCQ9Y266 331 aa19.52■□□□□ 0.72
BRCA1-223ENST00000494123 NBPF6Q5VWK0 638 aa19.51■□□□□ 0.71
BRCA1-223ENST00000494123 TCP11L2Q8N4U5 519 aa19.51■□□□□ 0.71
BRCA1-223ENST00000494123 NBPF4Q96M43 638 aa19.51■□□□□ 0.71
BRCA1-223ENST00000494123 GLI3P10071 1580 aa19.51■□□□□ 0.71
BRCA1-223ENST00000494123 U2SURPO15042 1029 aaKnown RBP19.51■□□□□ 0.71
BRCA1-223ENST00000494123 RBM6P78332 1123 aaKnown RBP19.51■□□□□ 0.71
BRCA1-223ENST00000494123 USHBP1Q8N6Y0 703 aa19.51■□□□□ 0.71
BRCA1-223ENST00000494123 EYA1Q99502 592 aa19.51■□□□□ 0.71
BRCA1-223ENST00000494123 POTEAQ6S8J7 498 aa19.5■□□□□ 0.71
BRCA1-223ENST00000494123 THRAP3Q9Y2W1 955 aaKnown RBP19.5■□□□□ 0.71
BRCA1-223ENST00000494123 RXRBP28702 533 aa19.49■□□□□ 0.71
BRCA1-223ENST00000494123 RGPD1P0DJD0 1748 aa19.48■□□□□ 0.71
BRCA1-223ENST00000494123 IGSF1Q8N6C5 1336 aa19.48■□□□□ 0.71
BRCA1-223ENST00000494123 WNK3Q9BYP7 1800 aa19.48■□□□□ 0.71
BRCA1-223ENST00000494123 A0A0G2JS52 829 aa19.47■□□□□ 0.71
BRCA1-223ENST00000494123 MYT1Q01538 1121 aa19.47■□□□□ 0.71
BRCA1-223ENST00000494123 FAM98CQ17RN3 349 aaKnown RBP19.47■□□□□ 0.71
BRCA1-223ENST00000494123 MRS2Q9HD23 443 aa19.47■□□□□ 0.71
BRCA1-223ENST00000494123 BARGINQ6ZT62 677 aa19.46■□□□□ 0.71
BRCA1-223ENST00000494123 U2AF1L5P0DN76 240 aaPredicted RBP19.45■□□□□ 0.7
BRCA1-223ENST00000494123 U2AF1Q01081 240 aaKnown RBP eCLIP19.45■□□□□ 0.7
BRCA1-223ENST00000494123 SULT6B1Q6IMI4 303 aa19.45■□□□□ 0.7
BRCA1-223ENST00000494123 RAPGEF4Q8WZA2 1011 aa19.45■□□□□ 0.7
BRCA1-223ENST00000494123 NCAPD2Q15021 1401 aa19.45■□□□□ 0.7
BRCA1-223ENST00000494123 IL2RBP14784 551 aa19.44■□□□□ 0.7
BRCA1-223ENST00000494123 CDCA7Q9BWT1 371 aaPredicted RBP19.44■□□□□ 0.7
BRCA1-223ENST00000494123 HMOX1P09601 288 aa19.43■□□□□ 0.7
BRCA1-223ENST00000494123 WDR43Q15061 677 aaKnown RBP eCLIP19.43■□□□□ 0.7
BRCA1-223ENST00000494123 CCDC184Q52MB2 194 aa19.43■□□□□ 0.7
BRCA1-223ENST00000494123 PARP4Q9UKK3 1724 aaKnown RBP19.43■□□□□ 0.7
BRCA1-223ENST00000494123 AEBP1Q8IUX7 1158 aa19.43■□□□□ 0.7
BRCA1-223ENST00000494123 MIER1Q8N108 512 aa19.43■□□□□ 0.7
BRCA1-223ENST00000494123 TATP17735 454 aaPredicted RBP19.42■□□□□ 0.7
BRCA1-223ENST00000494123 THSD7AQ9UPZ6 1657 aa19.42■□□□□ 0.7
BRCA1-223ENST00000494123 KDRP35968 1356 aa19.41■□□□□ 0.7
BRCA1-223ENST00000494123 DISP2A7MBM2 1401 aa19.41■□□□□ 0.7
BRCA1-223ENST00000494123 MEGF6O75095 1541 aa19.4■□□□□ 0.7
BRCA1-223ENST00000494123 ONECUT3O60422 494 aaPredicted RBP19.4■□□□□ 0.7
BRCA1-223ENST00000494123 SEPT12Q8IYM1 358 aa19.4■□□□□ 0.7
BRCA1-223ENST00000494123 CCER2I3L3R5 266 aa19.4■□□□□ 0.7
BRCA1-223ENST00000494123 DDB1Q16531 1140 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms