RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 STRN4Q9NRL3 753 aa10.25□□□□□ -0.77
VEGFA-214ENST00000493786 POLKQ9UBT6 870 aa10.25□□□□□ -0.77
VEGFA-214ENST00000493786 USP21Q9UK80 565 aa10.25□□□□□ -0.77
VEGFA-214ENST00000493786 EMILIN1Q9Y6C2 1016 aa10.25□□□□□ -0.77
VEGFA-214ENST00000493786 AFF2P51816 1311 aa10.25□□□□□ -0.77
VEGFA-214ENST00000493786 BLMP54132 1417 aaPredicted RBP10.24□□□□□ -0.77
VEGFA-214ENST00000493786 DIEXFQ68CQ4 756 aaKnown RBP10.24□□□□□ -0.77
VEGFA-214ENST00000493786 ZNF772Q68DY9 489 aaPredicted RBP10.24□□□□□ -0.77
VEGFA-214ENST00000493786 PRKRIP1Q9H875 184 aaPredicted RBP10.24□□□□□ -0.77
VEGFA-214ENST00000493786 CCDC9Q9Y3X0 531 aaKnown RBP10.24□□□□□ -0.77
VEGFA-214ENST00000493786 MYBBP1AQ9BQG0 1328 aaKnown RBP10.24□□□□□ -0.77
VEGFA-214ENST00000493786 PPP2R1AP30153 589 aa10.23□□□□□ -0.77
VEGFA-214ENST00000493786 MTHFSP49914 203 aa10.23□□□□□ -0.77
VEGFA-214ENST00000493786 UNC5CLQ8IV45 518 aa10.23□□□□□ -0.77
VEGFA-214ENST00000493786 FNBP4Q8N3X1 1017 aaPredicted RBP10.23□□□□□ -0.77
VEGFA-214ENST00000493786 LTV1Q96GA3 475 aaPredicted RBP10.23□□□□□ -0.77
VEGFA-214ENST00000493786 LTN1O94822 1766 aa10.22□□□□□ -0.77
VEGFA-214ENST00000493786 ANKRD24Q8TF21 1146 aa10.22□□□□□ -0.77
VEGFA-214ENST00000493786 INSRP06213 1382 aa10.22□□□□□ -0.77
VEGFA-214ENST00000493786 CDK12Q9NYV4 1490 aaPredicted RBP10.22□□□□□ -0.77
VEGFA-214ENST00000493786 SLIT2O94813 1529 aa10.22□□□□□ -0.77
VEGFA-214ENST00000493786 PLCH1Q4KWH8 1693 aa10.22□□□□□ -0.77
VEGFA-214ENST00000493786 HSP90AB2PQ58FF8 381 aa10.21□□□□□ -0.77
VEGFA-214ENST00000493786 TOM1L2Q6ZVM7 507 aa10.21□□□□□ -0.77
VEGFA-214ENST00000493786 TRPC5Q9UL62 973 aaPredicted RBP10.21□□□□□ -0.77
VEGFA-214ENST00000493786 AXIN2Q9Y2T1 843 aa10.21□□□□□ -0.77
VEGFA-214ENST00000493786 ERBB3P21860 1342 aa10.21□□□□□ -0.78
VEGFA-214ENST00000493786 COL5A2P05997 1499 aaPredicted RBP10.2□□□□□ -0.78
VEGFA-214ENST00000493786 WDR17Q8IZU2 1322 aa10.2□□□□□ -0.78
VEGFA-214ENST00000493786 LMO7Q8WWI1 1683 aa10.2□□□□□ -0.78
VEGFA-214ENST00000493786 NLRP2Q9NX02 1062 aa10.2□□□□□ -0.78
VEGFA-214ENST00000493786 NWD2Q9ULI1 1742 aa10.2□□□□□ -0.78
VEGFA-214ENST00000493786 NUDCQ9Y266 331 aa10.2□□□□□ -0.78
VEGFA-214ENST00000493786 CAMTA1Q9Y6Y1 1673 aa10.2□□□□□ -0.78
VEGFA-214ENST00000493786 MAP2P11137 1827 aaKnown RBP10.19□□□□□ -0.78
VEGFA-214ENST00000493786 BCL9LQ86UU0 1499 aa10.19□□□□□ -0.78
VEGFA-214ENST00000493786 DIAPH1O60610 1272 aaKnown RBP10.19□□□□□ -0.78
VEGFA-214ENST00000493786 VPS72Q15906 364 aa10.19□□□□□ -0.78
VEGFA-214ENST00000493786 LARP1Q6PKG0 1096 aaKnown RBP10.19□□□□□ -0.78
VEGFA-214ENST00000493786 QTRT2Q9H974 415 aaKnown RBP10.19□□□□□ -0.78
VEGFA-214ENST00000493786 CRB1P82279 1406 aa10.18□□□□□ -0.78
VEGFA-214ENST00000493786 EIF4A2Q14240 407 aaKnown RBP10.18□□□□□ -0.78
VEGFA-214ENST00000493786 USP35Q9P2H5 1018 aa10.18□□□□□ -0.78
VEGFA-214ENST00000493786 COL18A1P39060 1754 aa10.18□□□□□ -0.78
VEGFA-214ENST00000493786 PEAK1Q9H792 1746 aa10.18□□□□□ -0.78
VEGFA-214ENST00000493786 ATRNO75882 1429 aa10.17□□□□□ -0.78
VEGFA-214ENST00000493786 SPATA31A5Q5VU36 1347 aa10.17□□□□□ -0.78
VEGFA-214ENST00000493786 SPATA31A7Q8IWB4 1347 aa10.17□□□□□ -0.78
VEGFA-214ENST00000493786 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.17□□□□□ -0.78
VEGFA-214ENST00000493786 A0A0G2JS52 829 aa10.17□□□□□ -0.78
VEGFA-214ENST00000493786 U2SURPO15042 1029 aaKnown RBP10.17□□□□□ -0.78
VEGFA-214ENST00000493786 MYT1Q01538 1121 aa10.17□□□□□ -0.78
VEGFA-214ENST00000493786 TCP11L2Q8N4U5 519 aa10.17□□□□□ -0.78
VEGFA-214ENST00000493786 GJD4Q96KN9 370 aaPredicted RBP10.17□□□□□ -0.78
VEGFA-214ENST00000493786 CARD10Q9BWT7 1032 aa10.17□□□□□ -0.78
VEGFA-214ENST00000493786 THRAP3Q9Y2W1 955 aaKnown RBP10.17□□□□□ -0.78
VEGFA-214ENST00000493786 NRAPQ86VF7 1730 aa10.16□□□□□ -0.78
VEGFA-214ENST00000493786 SPATA31A1Q5TZJ5 1347 aa10.16□□□□□ -0.78
VEGFA-214ENST00000493786 RXRBP28702 533 aa10.16□□□□□ -0.78
VEGFA-214ENST00000493786 RBM6P78332 1123 aaKnown RBP10.16□□□□□ -0.78
VEGFA-214ENST00000493786 WDR43Q15061 677 aaKnown RBP eCLIP10.16□□□□□ -0.788e-10■□□□□ 8.8
VEGFA-214ENST00000493786 FAM208AQ9UK61 1670 aaKnown RBP10.15□□□□□ -0.78
VEGFA-214ENST00000493786 IL13P35225 146 aa10.15□□□□□ -0.78
VEGFA-214ENST00000493786 NBPF6Q5VWK0 638 aa10.15□□□□□ -0.78
VEGFA-214ENST00000493786 RAPGEF4Q8WZA2 1011 aa10.15□□□□□ -0.78
VEGFA-214ENST00000493786 NBPF4Q96M43 638 aa10.15□□□□□ -0.78
VEGFA-214ENST00000493786 EYA1Q99502 592 aa10.15□□□□□ -0.78
VEGFA-214ENST00000493786 CDCA7Q9BWT1 371 aaPredicted RBP10.15□□□□□ -0.78
VEGFA-214ENST00000493786 MRS2Q9HD23 443 aa10.15□□□□□ -0.78
VEGFA-214ENST00000493786 RGPD5Q99666 1765 aa10.14□□□□□ -0.79
VEGFA-214ENST00000493786 NEFMP07197 916 aa10.14□□□□□ -0.79
VEGFA-214ENST00000493786 U2AF1L5P0DN76 240 aaPredicted RBP10.14□□□□□ -0.79
VEGFA-214ENST00000493786 U2AF1Q01081 240 aaKnown RBP eCLIP10.14□□□□□ -0.79
VEGFA-214ENST00000493786 USHBP1Q8N6Y0 703 aa10.14□□□□□ -0.79
VEGFA-214ENST00000493786 IGSF1Q8N6C5 1336 aa10.13□□□□□ -0.79
VEGFA-214ENST00000493786 COL3A1P02461 1466 aaPredicted RBP10.13□□□□□ -0.79
VEGFA-214ENST00000493786 IL2RBP14784 551 aa10.13□□□□□ -0.79
VEGFA-214ENST00000493786 TATP17735 454 aaPredicted RBP10.13□□□□□ -0.79
VEGFA-214ENST00000493786 FAM98CQ17RN3 349 aaKnown RBP10.13□□□□□ -0.79
VEGFA-214ENST00000493786 BARGINQ6ZT62 677 aa10.13□□□□□ -0.79
VEGFA-214ENST00000493786 RGS17Q9UGC6 210 aaPredicted RBP10.13□□□□□ -0.79
VEGFA-214ENST00000493786 SULT6B1Q6IMI4 303 aa10.12□□□□□ -0.79
VEGFA-214ENST00000493786 POTEAQ6S8J7 498 aa10.12□□□□□ -0.79
VEGFA-214ENST00000493786 PNNQ9H307 717 aaKnown RBP10.12□□□□□ -0.79
VEGFA-214ENST00000493786 CCER2I3L3R5 266 aa10.11□□□□□ -0.79
VEGFA-214ENST00000493786 HMOX1P09601 288 aa10.11□□□□□ -0.79
VEGFA-214ENST00000493786 GLI3P10071 1580 aa10.1□□□□□ -0.79
VEGFA-214ENST00000493786 EXOC5O00471 708 aa10.1□□□□□ -0.79
VEGFA-214ENST00000493786 DDB1Q16531 1140 aa10.1□□□□□ -0.79
VEGFA-214ENST00000493786 SEPT12Q8IYM1 358 aa10.1□□□□□ -0.79
VEGFA-214ENST00000493786 MIER1Q8N108 512 aa10.1□□□□□ -0.79
VEGFA-214ENST00000493786 SPG7Q9UQ90 795 aa10.1□□□□□ -0.79
VEGFA-214ENST00000493786 MAPK8IP3Q9UPT6 1336 aa10.09□□□□□ -0.79
VEGFA-214ENST00000493786 NCAPD2Q15021 1401 aa10.09□□□□□ -0.79
VEGFA-214ENST00000493786 FCHSD2O94868 740 aa10.09□□□□□ -0.79
VEGFA-214ENST00000493786 PDE3BQ13370 1112 aa10.09□□□□□ -0.79
VEGFA-214ENST00000493786 PLEKHO1Q53GL0 409 aaPredicted RBP10.09□□□□□ -0.79
VEGFA-214ENST00000493786 AEBP1Q8IUX7 1158 aa10.09□□□□□ -0.79
VEGFA-214ENST00000493786 KDRP35968 1356 aa10.09□□□□□ -0.79
VEGFA-214ENST00000493786 PLEKHG2Q9H7P9 1386 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms