RNA–Protein interactions for RNA: ENST00000492672.5

COPS3-210, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 4

Gene COPS3, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-210ENST00000492672 POTEAQ6S8J7 498 aa21.67■■□□□ 1.06
COPS3-210ENST00000492672 PHF23Q9BUL5 403 aaPredicted RBP21.67■■□□□ 1.06
COPS3-210ENST00000492672 AATKQ6ZMQ8 1374 aa21.66■■□□□ 1.06
COPS3-210ENST00000492672 POLKQ9UBT6 870 aa21.66■■□□□ 1.06
COPS3-210ENST00000492672 RGPD2P0DJD1 1756 aa21.66■■□□□ 1.06
COPS3-210ENST00000492672 NPC1L1Q9UHC9 1359 aa21.65■■□□□ 1.06
COPS3-210ENST00000492672 STRN4Q9NRL3 753 aa21.65■■□□□ 1.06
COPS3-210ENST00000492672 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.64■■□□□ 1.06
COPS3-210ENST00000492672 UNC5CLQ8IV45 518 aa21.64■■□□□ 1.05
COPS3-210ENST00000492672 PPM1GO15355 546 aaPredicted RBP21.63■■□□□ 1.05
COPS3-210ENST00000492672 HOXC9P31274 260 aa21.63■■□□□ 1.05
COPS3-210ENST00000492672 AMPHP49418 695 aa21.63■■□□□ 1.05
COPS3-210ENST00000492672 IP6K1Q92551 441 aa21.63■■□□□ 1.05
COPS3-210ENST00000492672 QTRT2Q9H974 415 aaKnown RBP21.63■■□□□ 1.05
COPS3-210ENST00000492672 HSP90AB2PQ58FF8 381 aa21.62■■□□□ 1.05
COPS3-210ENST00000492672 COL5A2P05997 1499 aaPredicted RBP21.61■■□□□ 1.05
COPS3-210ENST00000492672 LARP1Q6PKG0 1096 aaKnown RBP21.61■■□□□ 1.05
COPS3-210ENST00000492672 LTV1Q96GA3 475 aaPredicted RBP21.61■■□□□ 1.05
COPS3-210ENST00000492672 ATRNO75882 1429 aa21.59■■□□□ 1.05
COPS3-210ENST00000492672 EVA1CP58658 441 aa21.59■■□□□ 1.05
COPS3-210ENST00000492672 ZNF772Q68DY9 489 aaPredicted RBP21.59■■□□□ 1.05
COPS3-210ENST00000492672 GLI3P10071 1580 aa21.57■■□□□ 1.04
COPS3-210ENST00000492672 MTHFSP49914 203 aa21.57■■□□□ 1.04
COPS3-210ENST00000492672 VPS72Q15906 364 aa21.57■■□□□ 1.04
COPS3-210ENST00000492672 ANKRD24Q8TF21 1146 aa21.57■■□□□ 1.04
COPS3-210ENST00000492672 PARD3Q8TEW0 1356 aa21.57■■□□□ 1.04
COPS3-210ENST00000492672 PPP2R1AP30153 589 aa21.56■■□□□ 1.04
COPS3-210ENST00000492672 TRPC5Q9UL62 973 aaPredicted RBP21.56■■□□□ 1.04
COPS3-210ENST00000492672 CCDC9Q9Y3X0 531 aaKnown RBP21.56■■□□□ 1.04
COPS3-210ENST00000492672 ABCC6O95255 1503 aa21.55■■□□□ 1.04
COPS3-210ENST00000492672 USP35Q9P2H5 1018 aa21.55■■□□□ 1.04
COPS3-210ENST00000492672 FLT4P35916 1363 aa21.55■■□□□ 1.04
COPS3-210ENST00000492672 GJD4Q96KN9 370 aaPredicted RBP21.54■■□□□ 1.04
COPS3-210ENST00000492672 SMG6Q86US8 1419 aaKnown RBP21.54■■□□□ 1.04
COPS3-210ENST00000492672 ERBB3P21860 1342 aa21.54■■□□□ 1.04
COPS3-210ENST00000492672 SPATA31A5Q5VU36 1347 aa21.54■■□□□ 1.04
COPS3-210ENST00000492672 SPATA31A7Q8IWB4 1347 aa21.54■■□□□ 1.04
COPS3-210ENST00000492672 WDR17Q8IZU2 1322 aa21.54■■□□□ 1.04
COPS3-210ENST00000492672 RTL1A6NKG5 1358 aa21.53■■□□□ 1.04
COPS3-210ENST00000492672 INSRP06213 1382 aa21.53■■□□□ 1.04
COPS3-210ENST00000492672 CSB-PGBD3P0DP91 1061 aa21.53■■□□□ 1.04
COPS3-210ENST00000492672 BLMP54132 1417 aaPredicted RBP21.53■■□□□ 1.04
COPS3-210ENST00000492672 TOM1L2Q6ZVM7 507 aa21.52■■□□□ 1.04
COPS3-210ENST00000492672 SPATA31A1Q5TZJ5 1347 aa21.52■■□□□ 1.03
COPS3-210ENST00000492672 PRKRIP1Q9H875 184 aaPredicted RBP21.51■■□□□ 1.03
COPS3-210ENST00000492672 CRB1P82279 1406 aa21.5■■□□□ 1.03
COPS3-210ENST00000492672 EIF4A2Q14240 407 aaKnown RBP21.5■■□□□ 1.03
COPS3-210ENST00000492672 NBPF6Q5VWK0 638 aa21.5■■□□□ 1.03
COPS3-210ENST00000492672 USHBP1Q8N6Y0 703 aa21.5■■□□□ 1.03
COPS3-210ENST00000492672 NBPF4Q96M43 638 aa21.5■■□□□ 1.03
COPS3-210ENST00000492672 NLRP2Q9NX02 1062 aa21.5■■□□□ 1.03
COPS3-210ENST00000492672 KIF24Q5T7B8 1368 aa21.49■■□□□ 1.03
COPS3-210ENST00000492672 RXRBP28702 533 aa21.49■■□□□ 1.03
COPS3-210ENST00000492672 RBM6P78332 1123 aaKnown RBP21.49■■□□□ 1.03
COPS3-210ENST00000492672 CDK12Q9NYV4 1490 aaPredicted RBP21.49■■□□□ 1.03
COPS3-210ENST00000492672 BRWD3Q6RI45 1802 aa21.48■■□□□ 1.03
COPS3-210ENST00000492672 RALBP1Q15311 655 aa21.48■■□□□ 1.03
COPS3-210ENST00000492672 FAM98CQ17RN3 349 aaKnown RBP21.48■■□□□ 1.03
COPS3-210ENST00000492672 FAM208AQ9UK61 1670 aaKnown RBP21.47■■□□□ 1.03
COPS3-210ENST00000492672 ILDR2Q71H61 639 aa21.47■■□□□ 1.03
COPS3-210ENST00000492672 COL3A1P02461 1466 aaPredicted RBP21.46■■□□□ 1.03
COPS3-210ENST00000492672 WNK3Q9BYP7 1800 aa21.46■■□□□ 1.03
COPS3-210ENST00000492672 CARD10Q9BWT7 1032 aa21.46■■□□□ 1.03
COPS3-210ENST00000492672 EYA1Q99502 592 aa21.45■■□□□ 1.02
COPS3-210ENST00000492672 IL13P35225 146 aa21.44■■□□□ 1.02
COPS3-210ENST00000492672 TCP11L2Q8N4U5 519 aa21.44■■□□□ 1.02
COPS3-210ENST00000492672 RGPD1P0DJD0 1748 aa21.43■■□□□ 1.02
COPS3-210ENST00000492672 RGS12O14924 1447 aa21.42■■□□□ 1.02
COPS3-210ENST00000492672 ONECUT3O60422 494 aaPredicted RBP21.42■■□□□ 1.02
COPS3-210ENST00000492672 CCDC184Q52MB2 194 aa21.42■■□□□ 1.02
COPS3-210ENST00000492672 THSD7AQ9UPZ6 1657 aa21.41■■□□□ 1.02
COPS3-210ENST00000492672 MYBBP1AQ9BQG0 1328 aaKnown RBP21.41■■□□□ 1.02
COPS3-210ENST00000492672 SEPT12Q8IYM1 358 aa21.41■■□□□ 1.02
COPS3-210ENST00000492672 AEBP1Q8IUX7 1158 aa21.4■■□□□ 1.02
COPS3-210ENST00000492672 DIAPH1O60610 1272 aaKnown RBP21.39■■□□□ 1.01
COPS3-210ENST00000492672 BARGINQ6ZT62 677 aa21.39■■□□□ 1.01
COPS3-210ENST00000492672 DISP2A7MBM2 1401 aa21.38■■□□□ 1.01
COPS3-210ENST00000492672 A0A0G2JS52 829 aa21.38■■□□□ 1.01
COPS3-210ENST00000492672 ANP32CO43423 234 aa21.38■■□□□ 1.01
COPS3-210ENST00000492672 MYT1Q01538 1121 aa21.38■■□□□ 1.01
COPS3-210ENST00000492672 THRAP3Q9Y2W1 955 aaKnown RBP21.37■■□□□ 1.01
COPS3-210ENST00000492672 MEGF6O75095 1541 aa21.37■■□□□ 1.01
COPS3-210ENST00000492672 PARP4Q9UKK3 1724 aaKnown RBP21.37■■□□□ 1.01
COPS3-210ENST00000492672 IGSF1Q8N6C5 1336 aa21.36■■□□□ 1.01
COPS3-210ENST00000492672 FAM182BQ5T319 152 aa21.36■■□□□ 1.01
COPS3-210ENST00000492672 NCAPD2Q15021 1401 aa21.36■■□□□ 1.01
COPS3-210ENST00000492672 LRRC37A3O60309 1634 aa21.36■■□□□ 1.01
COPS3-210ENST00000492672 U2SURPO15042 1029 aaKnown RBP21.35■■□□□ 1.01
COPS3-210ENST00000492672 HMOX1P09601 288 aa21.35■■□□□ 1.01
COPS3-210ENST00000492672 DIEXFQ68CQ4 756 aaKnown RBP21.35■■□□□ 1.01
COPS3-210ENST00000492672 CFAP53Q96M91 514 aa21.35■■□□□ 1.01
COPS3-210ENST00000492672 IL2RBP14784 551 aa21.34■■□□□ 1.01
COPS3-210ENST00000492672 SULT6B1Q6IMI4 303 aa21.34■■□□□ 1.01
COPS3-210ENST00000492672 SHANK3Q9BYB0 1731 aa21.34■■□□□ 1.01
COPS3-210ENST00000492672 DDB1Q16531 1140 aa21.29■■□□□ 1
COPS3-210ENST00000492672 MARCH10Q8NA82 808 aaPredicted RBP21.29■■□□□ 1
COPS3-210ENST00000492672 RAPGEF4Q8WZA2 1011 aa21.29■■□□□ 1
COPS3-210ENST00000492672 KAT6BQ8WYB5 2073 aa21.28■■□□□ 1
COPS3-210ENST00000492672 KDRP35968 1356 aa21.28■■□□□ 1
COPS3-210ENST00000492672 EXOC5O00471 708 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms