RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 ARHGEF25Q86VW2 580 aa15.14■□□□□ 0.01
UBE4B-210ENST00000488228 TNNT2P45379 298 aaPredicted RBP15.13■□□□□ 0.01
UBE4B-210ENST00000488228 RRS1Q15050 365 aaKnown RBP15.13■□□□□ 0.01
UBE4B-210ENST00000488228 CC2D1BQ5T0F9 858 aaKnown RBP15.13■□□□□ 0.01
UBE4B-210ENST00000488228 ZNF772Q68DY9 489 aaPredicted RBP15.13■□□□□ 0.01
UBE4B-210ENST00000488228 POTEAQ6S8J7 498 aa15.13■□□□□ 0.01
UBE4B-210ENST00000488228 MAP3K19Q56UN5 1328 aa15.13■□□□□ 0.01
UBE4B-210ENST00000488228 BRWD3Q6RI45 1802 aa15.13■□□□□ 0.01
UBE4B-210ENST00000488228 DDX10Q13206 875 aaKnown RBP15.12■□□□□ 0.01
UBE4B-210ENST00000488228 UNC5CLQ8IV45 518 aa15.12■□□□□ 0.01
UBE4B-210ENST00000488228 RTL1A6NKG5 1358 aa15.11■□□□□ 0.01
UBE4B-210ENST00000488228 SMG6Q86US8 1419 aaKnown RBP15.11■□□□□ 0.01
UBE4B-210ENST00000488228 ZNF316A6NFI3 1004 aaPredicted RBP15.11■□□□□ 0.01
UBE4B-210ENST00000488228 STRN4Q9NRL3 753 aa15.11■□□□□ 0.01
UBE4B-210ENST00000488228 THSD7AQ9UPZ6 1657 aa15.11■□□□□ 0.01
UBE4B-210ENST00000488228 NPC1L1Q9UHC9 1359 aa15.11■□□□□ 0.01
UBE4B-210ENST00000488228 BLMP54132 1417 aaPredicted RBP15.1■□□□□ 0.01
UBE4B-210ENST00000488228 AXIN2Q9Y2T1 843 aa15.1■□□□□ 0.01
UBE4B-210ENST00000488228 EMILIN1Q9Y6C2 1016 aa15.1■□□□□ 0.01
UBE4B-210ENST00000488228 CDK12Q9NYV4 1490 aaPredicted RBP15.09■□□□□ 0.01
UBE4B-210ENST00000488228 MORC1Q86VD1 984 aa15.09■□□□□ 0.01
UBE4B-210ENST00000488228 TRPC5Q9UL62 973 aaPredicted RBP15.09■□□□□ 0.01
UBE4B-210ENST00000488228 FLT4P35916 1363 aa15.09■□□□□ 0.01
UBE4B-210ENST00000488228 RGS12O14924 1447 aa15.09■□□□□ 0.01
UBE4B-210ENST00000488228 LRRC37A3O60309 1634 aa15.08■□□□□ 0
UBE4B-210ENST00000488228 QTRT2Q9H974 415 aaKnown RBP15.08■□□□□ 0
UBE4B-210ENST00000488228 CCDC9Q9Y3X0 531 aaKnown RBP15.08■□□□□ 0
UBE4B-210ENST00000488228 CRB1P82279 1406 aa15.08■□□□□ 0
UBE4B-210ENST00000488228 PARP4Q9UKK3 1724 aaKnown RBP15.07■□□□□ 0
UBE4B-210ENST00000488228 HOXC9P31274 260 aa15.07■□□□□ 0
UBE4B-210ENST00000488228 VPS72Q15906 364 aa15.07■□□□□ 0
UBE4B-210ENST00000488228 LARP1Q6PKG0 1096 aaKnown RBP15.07■□□□□ 0
UBE4B-210ENST00000488228 ERBB3P21860 1342 aa15.07■□□□□ 0
UBE4B-210ENST00000488228 AMPHP49418 695 aa15.06■□□□□ 0
UBE4B-210ENST00000488228 WDR17Q8IZU2 1322 aa15.06■□□□□ 0
UBE4B-210ENST00000488228 PPM1GO15355 546 aaPredicted RBP15.05■□□□□ -0
UBE4B-210ENST00000488228 EVA1CP58658 441 aa15.05■□□□□ -0
UBE4B-210ENST00000488228 IP6K1Q92551 441 aa15.05■□□□□ -0
UBE4B-210ENST00000488228 SPATA31A5Q5VU36 1347 aa15.05■□□□□ -0
UBE4B-210ENST00000488228 SPATA31A7Q8IWB4 1347 aa15.05■□□□□ -0
UBE4B-210ENST00000488228 KIF24Q5T7B8 1368 aa15.05■□□□□ -0
UBE4B-210ENST00000488228 RGPD1P0DJD0 1748 aa15.05■□□□□ -0
UBE4B-210ENST00000488228 CSB-PGBD3P0DP91 1061 aa15.04■□□□□ -0
UBE4B-210ENST00000488228 ANKRD24Q8TF21 1146 aa15.04■□□□□ -0
UBE4B-210ENST00000488228 LTV1Q96GA3 475 aaPredicted RBP15.04■□□□□ -0
UBE4B-210ENST00000488228 GJD4Q96KN9 370 aaPredicted RBP15.04■□□□□ -0
UBE4B-210ENST00000488228 POLKQ9UBT6 870 aa15.04■□□□□ -0
UBE4B-210ENST00000488228 SHANK3Q9BYB0 1731 aa15.03■□□□□ -0
UBE4B-210ENST00000488228 COL3A1P02461 1466 aaPredicted RBP15.03■□□□□ -0
UBE4B-210ENST00000488228 INSRP06213 1382 aa15.03■□□□□ -0
UBE4B-210ENST00000488228 PARD3Q8TEW0 1356 aa15.03■□□□□ -0
UBE4B-210ENST00000488228 SPATA31A1Q5TZJ5 1347 aa15.03■□□□□ -0
UBE4B-210ENST00000488228 RXRBP28702 533 aa15.03■□□□□ -0
UBE4B-210ENST00000488228 RBM6P78332 1123 aaKnown RBP15.03■□□□□ -0
UBE4B-210ENST00000488228 HSP90AB2PQ58FF8 381 aa15.03■□□□□ -0
UBE4B-210ENST00000488228 USP35Q9P2H5 1018 aa15.03■□□□□ -0
UBE4B-210ENST00000488228 TOM1L2Q6ZVM7 507 aa15.02■□□□□ -0
UBE4B-210ENST00000488228 ILDR2Q71H61 639 aa15.01□□□□□ -0.01
UBE4B-210ENST00000488228 FAM98CQ17RN3 349 aaKnown RBP15□□□□□ -0.01
UBE4B-210ENST00000488228 NLRP2Q9NX02 1062 aa15□□□□□ -0.01
UBE4B-210ENST00000488228 DISP2A7MBM2 1401 aa15□□□□□ -0.01
UBE4B-210ENST00000488228 PKD1L3Q7Z443 1732 aa14.99□□□□□ -0.01
UBE4B-210ENST00000488228 MEGF6O75095 1541 aa14.98□□□□□ -0.01
UBE4B-210ENST00000488228 A0A0G2JS52 829 aa14.98□□□□□ -0.01
UBE4B-210ENST00000488228 MYT1Q01538 1121 aa14.98□□□□□ -0.01
UBE4B-210ENST00000488228 TCP11L2Q8N4U5 519 aa14.98□□□□□ -0.01
UBE4B-210ENST00000488228 PPP2R1AP30153 589 aa14.97□□□□□ -0.01
UBE4B-210ENST00000488228 MTHFSP49914 203 aa14.97□□□□□ -0.01
UBE4B-210ENST00000488228 USHBP1Q8N6Y0 703 aa14.97□□□□□ -0.01
UBE4B-210ENST00000488228 CARD10Q9BWT7 1032 aa14.97□□□□□ -0.01
UBE4B-210ENST00000488228 NCAPD2Q15021 1401 aa14.97□□□□□ -0.01
UBE4B-210ENST00000488228 EIF4A2Q14240 407 aaKnown RBP14.96□□□□□ -0.01
UBE4B-210ENST00000488228 TNS2Q63HR2 1409 aa14.95□□□□□ -0.02
UBE4B-210ENST00000488228 EP400Q96L91 3159 aa14.95□□□□□ -0.02
UBE4B-210ENST00000488228 NBPF6Q5VWK0 638 aa14.95□□□□□ -0.02
UBE4B-210ENST00000488228 BARGINQ6ZT62 677 aa14.95□□□□□ -0.02
UBE4B-210ENST00000488228 SEPT12Q8IYM1 358 aa14.95□□□□□ -0.02
UBE4B-210ENST00000488228 NBPF4Q96M43 638 aa14.95□□□□□ -0.02
UBE4B-210ENST00000488228 SBF2Q86WG5 1849 aa14.94□□□□□ -0.02
UBE4B-210ENST00000488228 THRAP3Q9Y2W1 955 aaKnown RBP14.93□□□□□ -0.02
UBE4B-210ENST00000488228 VIRMAQ69YN4 1812 aaKnown RBP14.93□□□□□ -0.02
UBE4B-210ENST00000488228 OVOS2A0A0G2JMS6 1433 aa14.92□□□□□ -0.02
UBE4B-210ENST00000488228 DOT1LQ8TEK3 1739 aa14.92□□□□□ -0.02
UBE4B-210ENST00000488228 ONECUT3O60422 494 aaPredicted RBP14.92□□□□□ -0.02
UBE4B-210ENST00000488228 TNS1Q9HBL0 1735 aaKnown RBP14.92□□□□□ -0.02
UBE4B-210ENST00000488228 IGSF1Q8N6C5 1336 aa14.92□□□□□ -0.02
UBE4B-210ENST00000488228 RALBP1Q15311 655 aa14.91□□□□□ -0.02
UBE4B-210ENST00000488228 EYA1Q99502 592 aa14.91□□□□□ -0.02
UBE4B-210ENST00000488228 PRKRIP1Q9H875 184 aaPredicted RBP14.91□□□□□ -0.02
UBE4B-210ENST00000488228 MYBBP1AQ9BQG0 1328 aaKnown RBP14.91□□□□□ -0.02
UBE4B-210ENST00000488228 IL2RBP14784 551 aa14.9□□□□□ -0.02
UBE4B-210ENST00000488228 IL13P35225 146 aa14.9□□□□□ -0.02
UBE4B-210ENST00000488228 TOGARAM1Q9Y4F4 1720 aa14.89□□□□□ -0.03
UBE4B-210ENST00000488228 AEBP1Q8IUX7 1158 aa14.89□□□□□ -0.03
UBE4B-210ENST00000488228 NHSQ6T4R5 1651 aa14.88□□□□□ -0.03
UBE4B-210ENST00000488228 DIAPH1O60610 1272 aaKnown RBP14.88□□□□□ -0.03
UBE4B-210ENST00000488228 FAM182BQ5T319 152 aa14.88□□□□□ -0.03
UBE4B-210ENST00000488228 KRT27Q7Z3Y8 459 aa14.88□□□□□ -0.03
UBE4B-210ENST00000488228 CFAP53Q96M91 514 aa14.88□□□□□ -0.03
UBE4B-210ENST00000488228 KAT6BQ8WYB5 2073 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms