RNA–Protein interactions for RNA: ENST00000486516.5

COMMD6-211, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-211ENST00000486516 SENP3-EIF4A1A0A087X0R7 540 aa7.74□□□□□ -1.17
COMMD6-211ENST00000486516 CTSOP43234 321 aaPredicted RBP7.74□□□□□ -1.17
COMMD6-211ENST00000486516 SRSF11Q05519 484 aaKnown RBP7.74□□□□□ -1.17
COMMD6-211ENST00000486516 VASH1Q7L8A9 365 aaPredicted RBP7.74□□□□□ -1.17
COMMD6-211ENST00000486516 C1QTNF2Q9BXJ5 285 aa7.74□□□□□ -1.17
COMMD6-211ENST00000486516 SPDYE5A6NIY4 337 aa7.73□□□□□ -1.17
COMMD6-211ENST00000486516 AGBL1Q96MI9 1066 aa7.73□□□□□ -1.17
COMMD6-211ENST00000486516 CUEDC1Q9NWM3 386 aaPredicted RBP7.73□□□□□ -1.17
COMMD6-211ENST00000486516 PHF20L1A8MW92 1017 aa7.72□□□□□ -1.17
COMMD6-211ENST00000486516 SSTR3P32745 418 aaPredicted RBP7.72□□□□□ -1.17
COMMD6-211ENST00000486516 PER1O15534 1290 aaPredicted RBP7.71□□□□□ -1.18
COMMD6-211ENST00000486516 PPP1R26Q5T8A7 1209 aaPredicted RBP7.71□□□□□ -1.18
COMMD6-211ENST00000486516 Q6ZVU0 165 aa7.71□□□□□ -1.18
COMMD6-211ENST00000486516 INSM2Q96T92 566 aaPredicted RBP7.71□□□□□ -1.18
COMMD6-211ENST00000486516 MAP4K5Q9Y4K4 846 aa7.71□□□□□ -1.18
COMMD6-211ENST00000486516 PCDHB15Q9Y5E8 787 aa7.71□□□□□ -1.18
COMMD6-211ENST00000486516 BAG6P46379 1132 aa7.7□□□□□ -1.18
COMMD6-211ENST00000486516 KRI1Q8N9T8 703 aaKnown RBP7.7□□□□□ -1.18
COMMD6-211ENST00000486516 MAGEB6P1A0A0J9YX57 407 aa7.69□□□□□ -1.18
COMMD6-211ENST00000486516 FURINP09958 794 aa7.69□□□□□ -1.18
COMMD6-211ENST00000486516 ENAMQ9NRM1 1142 aa7.69□□□□□ -1.18
COMMD6-211ENST00000486516 RELBQ01201 579 aa7.68□□□□□ -1.18
COMMD6-211ENST00000486516 BEND7Q8N7W2 519 aaPredicted RBP7.68□□□□□ -1.18
COMMD6-211ENST00000486516 TRMT44Q8IYL2 757 aaKnown RBP7.67□□□□□ -1.18
COMMD6-211ENST00000486516 RNF217Q8TC41 542 aa7.67□□□□□ -1.18
COMMD6-211ENST00000486516 POLMQ9NP87 494 aaPredicted RBP7.67□□□□□ -1.18
COMMD6-211ENST00000486516 KRBA1A5PL33 1030 aa7.66□□□□□ -1.18
COMMD6-211ENST00000486516 GPR25O00155 361 aa7.66□□□□□ -1.18
COMMD6-211ENST00000486516 HRCP23327 699 aa7.66□□□□□ -1.18
COMMD6-211ENST00000486516 SH3BP5LQ7L8J4 393 aa7.66□□□□□ -1.18
COMMD6-211ENST00000486516 NEDD1Q8NHV4 660 aa7.66□□□□□ -1.18
COMMD6-211ENST00000486516 CARD14Q9BXL6 1004 aa7.66□□□□□ -1.18
COMMD6-211ENST00000486516 ZNF395Q9H8N7 513 aaPredicted RBP7.66□□□□□ -1.18
COMMD6-211ENST00000486516 RTN4Q9NQC3 1192 aaKnown RBP7.66□□□□□ -1.18
COMMD6-211ENST00000486516 IGF1RP08069 1367 aa7.65□□□□□ -1.18
COMMD6-211ENST00000486516 RSBN1LQ6PCB5 846 aaPredicted RBP7.65□□□□□ -1.18
COMMD6-211ENST00000486516 PODNQ7Z5L7 613 aa7.65□□□□□ -1.18
COMMD6-211ENST00000486516 CABLES1Q8TDN4 633 aa7.65□□□□□ -1.18
COMMD6-211ENST00000486516 PGPEP1Q9NXJ5 209 aa7.65□□□□□ -1.18
COMMD6-211ENST00000486516 BCRP11274 1271 aa7.63□□□□□ -1.19
COMMD6-211ENST00000486516 ACDQ96AP0 544 aa7.63□□□□□ -1.19
COMMD6-211ENST00000486516 MBIPQ9NS73 344 aa7.63□□□□□ -1.19
COMMD6-211ENST00000486516 ERFEQ4G0M1 354 aa7.62□□□□□ -1.19
COMMD6-211ENST00000486516 LCE3BQ5TA77 95 aa7.62□□□□□ -1.19
COMMD6-211ENST00000486516 FOXD4L5Q5VV16 416 aaPredicted RBP7.62□□□□□ -1.19
COMMD6-211ENST00000486516 TBC1D2Q9BYX2 928 aa7.62□□□□□ -1.19
COMMD6-211ENST00000486516 TSC1Q92574 1164 aa7.61□□□□□ -1.19
COMMD6-211ENST00000486516 ZNF837Q96EG3 531 aaPredicted RBP7.61□□□□□ -1.19
COMMD6-211ENST00000486516 SNRPNP63162 240 aaKnown RBP7.6□□□□□ -1.19
COMMD6-211ENST00000486516 CSPP1Q1MSJ5 1256 aa7.6□□□□□ -1.19
COMMD6-211ENST00000486516 AMER1Q5JTC6 1135 aaPredicted RBP7.6□□□□□ -1.19
COMMD6-211ENST00000486516 BEGAINQ9BUH8 593 aa7.6□□□□□ -1.19
COMMD6-211ENST00000486516 ZBTB3Q9H5J0 574 aa7.6□□□□□ -1.19
COMMD6-211ENST00000486516 ITGB7P26010 798 aa7.59□□□□□ -1.19
COMMD6-211ENST00000486516 NBPF14Q5TI25 921 aa7.59□□□□□ -1.19
COMMD6-211ENST00000486516 ARMC2Q8NEN0 867 aa7.59□□□□□ -1.19
COMMD6-211ENST00000486516 KRTAP4-12Q9BQ66 201 aa7.59□□□□□ -1.19
COMMD6-211ENST00000486516 RHOQP17081 205 aa7.58□□□□□ -1.2
COMMD6-211ENST00000486516 COL8A1P27658 744 aa7.58□□□□□ -1.2
COMMD6-211ENST00000486516 GJA5P36382 358 aa7.58□□□□□ -1.2
COMMD6-211ENST00000486516 TTLL12Q14166 644 aaPredicted RBP7.58□□□□□ -1.2
COMMD6-211ENST00000486516 KCTD15Q96SI1 283 aaPredicted RBP7.58□□□□□ -1.2
COMMD6-211ENST00000486516 GIGYF2Q6Y7W6 1299 aaKnown RBP7.57□□□□□ -1.2
COMMD6-211ENST00000486516 DBN1Q16643 649 aa7.56□□□□□ -1.2
COMMD6-211ENST00000486516 INTS6LQ5JSJ4 861 aaKnown RBP7.56□□□□□ -1.2
COMMD6-211ENST00000486516 TMPRSS4Q9NRS4 437 aa7.56□□□□□ -1.2
COMMD6-211ENST00000486516 LYSMD3Q7Z3D4 306 aa7.55□□□□□ -1.2
COMMD6-211ENST00000486516 PRICKLE2Q7Z3G6 844 aa7.55□□□□□ -1.2
COMMD6-211ENST00000486516 KDF1Q8NAX2 398 aaPredicted RBP7.55□□□□□ -1.2
COMMD6-211ENST00000486516 GTPBP3Q969Y2 492 aaKnown RBP7.55□□□□□ -1.2
COMMD6-211ENST00000486516 PRPF38BQ5VTL8 546 aaKnown RBP7.54□□□□□ -1.2
COMMD6-211ENST00000486516 TRIM22Q8IYM9 498 aa7.54□□□□□ -1.2
COMMD6-211ENST00000486516 ADD1P35611 737 aaKnown RBP7.53□□□□□ -1.2
COMMD6-211ENST00000486516 DHX9Q08211 1270 aaKnown RBP7.53□□□□□ -1.2
COMMD6-211ENST00000486516 QPCTQ16769 361 aa7.53□□□□□ -1.2
COMMD6-211ENST00000486516 RIPOR1Q6ZS17 1223 aa7.53□□□□□ -1.2
COMMD6-211ENST00000486516 RIC3Q7Z5B4 369 aa7.53□□□□□ -1.2
COMMD6-211ENST00000486516 SHISA8B8ZZ34 492 aa7.52□□□□□ -1.21
COMMD6-211ENST00000486516 OIP5O43482 229 aa7.52□□□□□ -1.21
COMMD6-211ENST00000486516 ZNF784Q8NCA9 323 aaPredicted RBP7.52□□□□□ -1.21
COMMD6-211ENST00000486516 SLC10A4Q96EP9 437 aa7.52□□□□□ -1.21
COMMD6-211ENST00000486516 KRTAP9-9Q9BYP9 154 aa7.52□□□□□ -1.21
COMMD6-211ENST00000486516 KRTAP9-4Q9BYQ2 154 aa7.52□□□□□ -1.21
COMMD6-211ENST00000486516 ADH1AP07327 375 aa7.51□□□□□ -1.21
COMMD6-211ENST00000486516 ARHGAP9Q9BRR9 750 aa7.51□□□□□ -1.21
COMMD6-211ENST00000486516 PTGIRP43119 386 aa7.5□□□□□ -1.21
COMMD6-211ENST00000486516 RAB15P59190 212 aa7.5□□□□□ -1.21
COMMD6-211ENST00000486516 FOXR1Q6PIV2 292 aa7.5□□□□□ -1.21
COMMD6-211ENST00000486516 C1orf229Q6ZS94 237 aaPredicted RBP7.5□□□□□ -1.21
COMMD6-211ENST00000486516 SUV39H2Q9H5I1 410 aa7.5□□□□□ -1.21
COMMD6-211ENST00000486516 LIMD1Q9UGP4 676 aa7.5□□□□□ -1.21
COMMD6-211ENST00000486516 NUTM2BA6NNL0 878 aaPredicted RBP7.49□□□□□ -1.21
COMMD6-211ENST00000486516 NUTM2EB1AL46 878 aaPredicted RBP7.49□□□□□ -1.21
COMMD6-211ENST00000486516 LILRA1O75019 489 aa7.49□□□□□ -1.21
COMMD6-211ENST00000486516 MX2P20592 715 aa7.49□□□□□ -1.21
COMMD6-211ENST00000486516 NUTM2DQ5VT03 806 aaPredicted RBP7.49□□□□□ -1.21
COMMD6-211ENST00000486516 NUTM2AQ8IVF1 878 aaPredicted RBP7.49□□□□□ -1.21
COMMD6-211ENST00000486516 C1QTNF9BB2RNN3 333 aa7.48□□□□□ -1.21
COMMD6-211ENST00000486516 GRIN2CQ14957 1233 aa7.48□□□□□ -1.21
COMMD6-211ENST00000486516 AMHR2Q16671 573 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms