RNA–Protein interactions for RNA: ENST00000479955.5

TRAPPC12-219, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-219ENST00000479955 CCER2I3L3R5 266 aa15.78■□□□□ 0.12
TRAPPC12-219ENST00000479955 CDK12Q9NYV4 1490 aaPredicted RBP15.78■□□□□ 0.12
TRAPPC12-219ENST00000479955 COL14A1Q05707 1796 aaKnown RBP15.77■□□□□ 0.12
TRAPPC12-219ENST00000479955 INSRP06213 1382 aa15.77■□□□□ 0.12
TRAPPC12-219ENST00000479955 NUDCQ9Y266 331 aa15.77■□□□□ 0.12
TRAPPC12-219ENST00000479955 EVA1CP58658 441 aa15.76■□□□□ 0.11
TRAPPC12-219ENST00000479955 CHRNA2Q15822 529 aa15.76■□□□□ 0.11
TRAPPC12-219ENST00000479955 HSP90AB2PQ58FF8 381 aa15.76■□□□□ 0.11
TRAPPC12-219ENST00000479955 MIER1Q8N108 512 aa15.76■□□□□ 0.11
TRAPPC12-219ENST00000479955 NGLY1Q96IV0 654 aa15.76■□□□□ 0.11
TRAPPC12-219ENST00000479955 DIAPH1O60610 1272 aaKnown RBP15.75■□□□□ 0.11
TRAPPC12-219ENST00000479955 C8orf37Q96NL8 207 aa15.74■□□□□ 0.11
TRAPPC12-219ENST00000479955 MRS2Q9HD23 443 aa15.74■□□□□ 0.11
TRAPPC12-219ENST00000479955 BTG4Q9NY30 223 aa15.74■□□□□ 0.11
TRAPPC12-219ENST00000479955 COL18A1P39060 1754 aa15.74■□□□□ 0.11
TRAPPC12-219ENST00000479955 ILDR1Q86SU0 546 aaPredicted RBP15.73■□□□□ 0.11
TRAPPC12-219ENST00000479955 AXIN2Q9Y2T1 843 aa15.73■□□□□ 0.11
TRAPPC12-219ENST00000479955 PEAK1Q9H792 1746 aa15.73■□□□□ 0.11
TRAPPC12-219ENST00000479955 LRP6O75581 1613 aa15.72■□□□□ 0.11
TRAPPC12-219ENST00000479955 CSB-PGBD3P0DP91 1061 aa15.72■□□□□ 0.11
TRAPPC12-219ENST00000479955 FNBP4Q8N3X1 1017 aaPredicted RBP15.72■□□□□ 0.11
TRAPPC12-219ENST00000479955 ANKRD24Q8TF21 1146 aa15.72■□□□□ 0.11
TRAPPC12-219ENST00000479955 NWD2Q9ULI1 1742 aa15.71■□□□□ 0.11
TRAPPC12-219ENST00000479955 LMO7Q8WWI1 1683 aa15.71■□□□□ 0.11
TRAPPC12-219ENST00000479955 LTV1Q96GA3 475 aaPredicted RBP15.71■□□□□ 0.11
TRAPPC12-219ENST00000479955 ERBB3P21860 1342 aa15.7■□□□□ 0.1
TRAPPC12-219ENST00000479955 CAMTA1Q9Y6Y1 1673 aa15.7■□□□□ 0.1
TRAPPC12-219ENST00000479955 IL13P35225 146 aa15.7■□□□□ 0.1
TRAPPC12-219ENST00000479955 EIF4A2Q14240 407 aaKnown RBP15.7■□□□□ 0.1
TRAPPC12-219ENST00000479955 UNC5CLQ8IV45 518 aa15.7■□□□□ 0.1
TRAPPC12-219ENST00000479955 RGPD5Q99666 1765 aa15.7■□□□□ 0.1
TRAPPC12-219ENST00000479955 WDR17Q8IZU2 1322 aa15.69■□□□□ 0.1
TRAPPC12-219ENST00000479955 SLIT2O94813 1529 aa15.69■□□□□ 0.1
TRAPPC12-219ENST00000479955 WDR43Q15061 677 aaKnown RBP eCLIP15.69■□□□□ 0.1
TRAPPC12-219ENST00000479955 PNNQ9H307 717 aaKnown RBP15.69■□□□□ 0.1
TRAPPC12-219ENST00000479955 STRN4Q9NRL3 753 aa15.69■□□□□ 0.1
TRAPPC12-219ENST00000479955 USP21Q9UK80 565 aa15.69■□□□□ 0.1
TRAPPC12-219ENST00000479955 COL5A2P05997 1499 aaPredicted RBP15.69■□□□□ 0.1
TRAPPC12-219ENST00000479955 PLCH1Q4KWH8 1693 aa15.69■□□□□ 0.1
TRAPPC12-219ENST00000479955 FAM208AQ9UK61 1670 aaKnown RBP15.68■□□□□ 0.1
TRAPPC12-219ENST00000479955 COL3A1P02461 1466 aaPredicted RBP15.68■□□□□ 0.1
TRAPPC12-219ENST00000479955 U2SURPO15042 1029 aaKnown RBP15.68■□□□□ 0.1
TRAPPC12-219ENST00000479955 TOM1L2Q6ZVM7 507 aa15.68■□□□□ 0.1
TRAPPC12-219ENST00000479955 NLRP2Q9NX02 1062 aa15.67■□□□□ 0.1
TRAPPC12-219ENST00000479955 AFF2P51816 1311 aa15.67■□□□□ 0.1
TRAPPC12-219ENST00000479955 U2AF1L5P0DN76 240 aaPredicted RBP15.66■□□□□ 0.1
TRAPPC12-219ENST00000479955 U2AF1Q01081 240 aaKnown RBP eCLIP15.66■□□□□ 0.12e-6■□□□□ 9.2
TRAPPC12-219ENST00000479955 ZNF772Q68DY9 489 aaPredicted RBP15.66■□□□□ 0.1
TRAPPC12-219ENST00000479955 PNISRQ8TF01 805 aaKnown RBP15.66■□□□□ 0.1
TRAPPC12-219ENST00000479955 CARD10Q9BWT7 1032 aa15.66■□□□□ 0.1
TRAPPC12-219ENST00000479955 CRB1P82279 1406 aa15.66■□□□□ 0.1
TRAPPC12-219ENST00000479955 VPS72Q15906 364 aa15.65■□□□□ 0.1
TRAPPC12-219ENST00000479955 CCDC184Q52MB2 194 aa15.65■□□□□ 0.1
TRAPPC12-219ENST00000479955 LARP1Q6PKG0 1096 aaKnown RBP15.65■□□□□ 0.1
TRAPPC12-219ENST00000479955 EYA1Q99502 592 aa15.65■□□□□ 0.1
TRAPPC12-219ENST00000479955 IGSF1Q8N6C5 1336 aa15.65■□□□□ 0.1
TRAPPC12-219ENST00000479955 BCL9LQ86UU0 1499 aa15.65■□□□□ 0.1
TRAPPC12-219ENST00000479955 FCHSD2O94868 740 aa15.64■□□□□ 0.09
TRAPPC12-219ENST00000479955 NEFMP07197 916 aa15.64■□□□□ 0.09
TRAPPC12-219ENST00000479955 NBPF6Q5VWK0 638 aa15.64■□□□□ 0.09
TRAPPC12-219ENST00000479955 NBPF4Q96M43 638 aa15.64■□□□□ 0.09
TRAPPC12-219ENST00000479955 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.64■□□□□ 0.09
TRAPPC12-219ENST00000479955 TRPC5Q9UL62 973 aaPredicted RBP15.64■□□□□ 0.09
TRAPPC12-219ENST00000479955 THRAP3Q9Y2W1 955 aaKnown RBP15.64■□□□□ 0.09
TRAPPC12-219ENST00000479955 NRAPQ86VF7 1730 aa15.63■□□□□ 0.09
TRAPPC12-219ENST00000479955 SULT6B1Q6IMI4 303 aa15.63■□□□□ 0.09
TRAPPC12-219ENST00000479955 CCDC9Q9Y3X0 531 aaKnown RBP15.63■□□□□ 0.09
TRAPPC12-219ENST00000479955 PHF23Q9BUL5 403 aaPredicted RBP15.62■□□□□ 0.09
TRAPPC12-219ENST00000479955 CDCA7Q9BWT1 371 aaPredicted RBP15.62■□□□□ 0.09
TRAPPC12-219ENST00000479955 RGPD1P0DJD0 1748 aa15.61■□□□□ 0.09
TRAPPC12-219ENST00000479955 TCP11L2Q8N4U5 519 aa15.61■□□□□ 0.09
TRAPPC12-219ENST00000479955 RAPGEF4Q8WZA2 1011 aa15.61■□□□□ 0.09
TRAPPC12-219ENST00000479955 ADAMTS8Q9UP79 889 aa15.61■□□□□ 0.09
TRAPPC12-219ENST00000479955 SPATA31A1Q5TZJ5 1347 aa15.61■□□□□ 0.09
TRAPPC12-219ENST00000479955 SPATA31A5Q5VU36 1347 aa15.61■□□□□ 0.09
TRAPPC12-219ENST00000479955 SPATA31A7Q8IWB4 1347 aa15.61■□□□□ 0.09
TRAPPC12-219ENST00000479955 KDRP35968 1356 aa15.61■□□□□ 0.09
TRAPPC12-219ENST00000479955 FAM9BQ8IZU0 186 aa15.6■□□□□ 0.09
TRAPPC12-219ENST00000479955 QTRT2Q9H974 415 aaKnown RBP15.6■□□□□ 0.09
TRAPPC12-219ENST00000479955 PLEKHG2Q9H7P9 1386 aa15.6■□□□□ 0.09
TRAPPC12-219ENST00000479955 NCAPD2Q15021 1401 aa15.6■□□□□ 0.09
TRAPPC12-219ENST00000479955 HMOX1P09601 288 aa15.59■□□□□ 0.09
TRAPPC12-219ENST00000479955 TATP17735 454 aaPredicted RBP15.59■□□□□ 0.09
TRAPPC12-219ENST00000479955 GJD4Q96KN9 370 aaPredicted RBP15.59■□□□□ 0.09
TRAPPC12-219ENST00000479955 USP35Q9P2H5 1018 aa15.59■□□□□ 0.09
TRAPPC12-219ENST00000479955 RGPD2P0DJD1 1756 aa15.59■□□□□ 0.09
TRAPPC12-219ENST00000479955 IL2RBP14784 551 aa15.58■□□□□ 0.08
TRAPPC12-219ENST00000479955 BARGINQ6ZT62 677 aa15.58■□□□□ 0.08
TRAPPC12-219ENST00000479955 USHBP1Q8N6Y0 703 aa15.58■□□□□ 0.08
TRAPPC12-219ENST00000479955 ATRNO75882 1429 aa15.58■□□□□ 0.08
TRAPPC12-219ENST00000479955 AMOTQ4VCS5 1084 aa15.57■□□□□ 0.08
TRAPPC12-219ENST00000479955 RUNDC1Q96C34 613 aa15.57■□□□□ 0.08
TRAPPC12-219ENST00000479955 RSPH6AQ9H0K4 717 aa15.57■□□□□ 0.08
TRAPPC12-219ENST00000479955 MAPK8IP3Q9UPT6 1336 aa15.57■□□□□ 0.08
TRAPPC12-219ENST00000479955 PRKAR2BP31323 418 aa15.56■□□□□ 0.08
TRAPPC12-219ENST00000479955 PLEKHO1Q53GL0 409 aaPredicted RBP15.56■□□□□ 0.08
TRAPPC12-219ENST00000479955 AEBP1Q8IUX7 1158 aa15.56■□□□□ 0.08
TRAPPC12-219ENST00000479955 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.56■□□□□ 0.08
TRAPPC12-219ENST00000479955 RBM6P78332 1123 aaKnown RBP15.55■□□□□ 0.08
TRAPPC12-219ENST00000479955 SPG7Q9UQ90 795 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 170.6 ms