RNA–Protein interactions for RNA: ENST00000477567.5

MMP11-208, Transcript of matrix metallopeptidase 11, humanhuman

TSL 5

Gene MMP11, Length 929 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-208ENST00000477567 NWD2Q9ULI1 1742 aa21.09■□□□□ 0.97
MMP11-208ENST00000477567 PLCH1Q4KWH8 1693 aa21.09■□□□□ 0.97
MMP11-208ENST00000477567 MTHFSP49914 203 aa21.09■□□□□ 0.97
MMP11-208ENST00000477567 IP6K1Q92551 441 aa21.09■□□□□ 0.97
MMP11-208ENST00000477567 PRDM11Q9NQV5 511 aa21.09■□□□□ 0.97
MMP11-208ENST00000477567 FLT4P35916 1363 aa21.09■□□□□ 0.97
MMP11-208ENST00000477567 FAM83GA6ND36 823 aa21.08■□□□□ 0.97
MMP11-208ENST00000477567 BLMP54132 1417 aaPredicted RBP21.07■□□□□ 0.96
MMP11-208ENST00000477567 HOXC9P31274 260 aa21.07■□□□□ 0.96
MMP11-208ENST00000477567 CAMTA1Q9Y6Y1 1673 aa21.06■□□□□ 0.96
MMP11-208ENST00000477567 ADAMTS2O95450 1211 aa21.06■□□□□ 0.96
MMP11-208ENST00000477567 AMPHP49418 695 aa21.06■□□□□ 0.96
MMP11-208ENST00000477567 CHRNA2Q15822 529 aa21.05■□□□□ 0.96
MMP11-208ENST00000477567 AXIN2Q9Y2T1 843 aa21.05■□□□□ 0.96
MMP11-208ENST00000477567 COL3A1P02461 1466 aaPredicted RBP21.05■□□□□ 0.96
MMP11-208ENST00000477567 SLIT2O94813 1529 aa21.04■□□□□ 0.96
MMP11-208ENST00000477567 NRAPQ86VF7 1730 aa21.04■□□□□ 0.96
MMP11-208ENST00000477567 FAM208AQ9UK61 1670 aaKnown RBP21.03■□□□□ 0.96
MMP11-208ENST00000477567 HSP90AB2PQ58FF8 381 aa21.03■□□□□ 0.96
MMP11-208ENST00000477567 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.03■□□□□ 0.96
MMP11-208ENST00000477567 PPM1GO15355 546 aaPredicted RBP21.02■□□□□ 0.96
MMP11-208ENST00000477567 FNBP4Q8N3X1 1017 aaPredicted RBP21.02■□□□□ 0.96
MMP11-208ENST00000477567 POTEAQ6S8J7 498 aa21.01■□□□□ 0.95
MMP11-208ENST00000477567 COL5A2P05997 1499 aaPredicted RBP21.01■□□□□ 0.95
MMP11-208ENST00000477567 ZBTB7CA1YPR0 619 aa21■□□□□ 0.95
MMP11-208ENST00000477567 RGPD2P0DJD1 1756 aa21■□□□□ 0.95
MMP11-208ENST00000477567 RGPD1P0DJD0 1748 aa20.99■□□□□ 0.95
MMP11-208ENST00000477567 MIER1Q8N108 512 aa20.99■□□□□ 0.95
MMP11-208ENST00000477567 NGLY1Q96IV0 654 aa20.99■□□□□ 0.95
MMP11-208ENST00000477567 CFAP53Q96M91 514 aa20.99■□□□□ 0.95
MMP11-208ENST00000477567 BTG4Q9NY30 223 aa20.99■□□□□ 0.95
MMP11-208ENST00000477567 ERBB3P21860 1342 aa20.99■□□□□ 0.95
MMP11-208ENST00000477567 CCER2I3L3R5 266 aa20.98■□□□□ 0.95
MMP11-208ENST00000477567 MEX3CQ5U5Q3 659 aaKnown RBP20.98■□□□□ 0.95
MMP11-208ENST00000477567 C8orf37Q96NL8 207 aa20.98■□□□□ 0.95
MMP11-208ENST00000477567 BCL9LQ86UU0 1499 aa20.98■□□□□ 0.95
MMP11-208ENST00000477567 IL13P35225 146 aa20.96■□□□□ 0.95
MMP11-208ENST00000477567 EIF4A2Q14240 407 aaKnown RBP20.96■□□□□ 0.95
MMP11-208ENST00000477567 ANKRD24Q8TF21 1146 aa20.96■□□□□ 0.95
MMP11-208ENST00000477567 DIAPH1O60610 1272 aaKnown RBP20.95■□□□□ 0.94
MMP11-208ENST00000477567 CCDC184Q52MB2 194 aa20.95■□□□□ 0.94
MMP11-208ENST00000477567 WDR17Q8IZU2 1322 aa20.95■□□□□ 0.94
MMP11-208ENST00000477567 UNC5CLQ8IV45 518 aa20.94■□□□□ 0.94
MMP11-208ENST00000477567 NCAPD2Q15021 1401 aa20.94■□□□□ 0.94
MMP11-208ENST00000477567 AFF2P51816 1311 aa20.93■□□□□ 0.94
MMP11-208ENST00000477567 EVA1CP58658 441 aa20.91■□□□□ 0.94
MMP11-208ENST00000477567 CRB1P82279 1406 aa20.91■□□□□ 0.94
MMP11-208ENST00000477567 LTV1Q96GA3 475 aaPredicted RBP20.91■□□□□ 0.94
MMP11-208ENST00000477567 USP21Q9UK80 565 aa20.91■□□□□ 0.94
MMP11-208ENST00000477567 IGSF1Q8N6C5 1336 aa20.9■□□□□ 0.94
MMP11-208ENST00000477567 EYA1Q99502 592 aa20.9■□□□□ 0.94
MMP11-208ENST00000477567 MRS2Q9HD23 443 aa20.9■□□□□ 0.94
MMP11-208ENST00000477567 NUDCQ9Y266 331 aa20.9■□□□□ 0.94
MMP11-208ENST00000477567 VPS72Q15906 364 aa20.89■□□□□ 0.93
MMP11-208ENST00000477567 NBPF6Q5VWK0 638 aa20.89■□□□□ 0.93
MMP11-208ENST00000477567 LARP1Q6PKG0 1096 aaKnown RBP20.89■□□□□ 0.93
MMP11-208ENST00000477567 NBPF4Q96M43 638 aa20.89■□□□□ 0.93
MMP11-208ENST00000477567 CARD10Q9BWT7 1032 aa20.89■□□□□ 0.93
MMP11-208ENST00000477567 STRN4Q9NRL3 753 aa20.89■□□□□ 0.93
MMP11-208ENST00000477567 ATRNO75882 1429 aa20.88■□□□□ 0.93
MMP11-208ENST00000477567 KDRP35968 1356 aa20.88■□□□□ 0.93
MMP11-208ENST00000477567 CSB-PGBD3P0DP91 1061 aa20.88■□□□□ 0.93
MMP11-208ENST00000477567 PNISRQ8TF01 805 aaKnown RBP20.88■□□□□ 0.93
MMP11-208ENST00000477567 WNK3Q9BYP7 1800 aa20.88■□□□□ 0.93
MMP11-208ENST00000477567 SPATA31A5Q5VU36 1347 aa20.87■□□□□ 0.93
MMP11-208ENST00000477567 SPATA31A7Q8IWB4 1347 aa20.87■□□□□ 0.93
MMP11-208ENST00000477567 TOM1L2Q6ZVM7 507 aa20.86■□□□□ 0.93
MMP11-208ENST00000477567 NLRP2Q9NX02 1062 aa20.86■□□□□ 0.93
MMP11-208ENST00000477567 SPATA31A1Q5TZJ5 1347 aa20.85■□□□□ 0.93
MMP11-208ENST00000477567 ZNF772Q68DY9 489 aaPredicted RBP20.85■□□□□ 0.93
MMP11-208ENST00000477567 TRPC5Q9UL62 973 aaPredicted RBP20.84■□□□□ 0.93
MMP11-208ENST00000477567 THRAP3Q9Y2W1 955 aaKnown RBP20.84■□□□□ 0.93
MMP11-208ENST00000477567 U2SURPO15042 1029 aaKnown RBP20.83■□□□□ 0.93
MMP11-208ENST00000477567 GLI3P10071 1580 aa20.83■□□□□ 0.92
MMP11-208ENST00000477567 PLEKHG2Q9H7P9 1386 aa20.83■□□□□ 0.92
MMP11-208ENST00000477567 FCHSD2O94868 740 aa20.82■□□□□ 0.92
MMP11-208ENST00000477567 U2AF1L5P0DN76 240 aaPredicted RBP20.82■□□□□ 0.92
MMP11-208ENST00000477567 U2AF1Q01081 240 aaKnown RBP eCLIP20.82■□□□□ 0.92
MMP11-208ENST00000477567 PARP4Q9UKK3 1724 aaKnown RBP20.81■□□□□ 0.92
MMP11-208ENST00000477567 WDR43Q15061 677 aaKnown RBP eCLIP20.81■□□□□ 0.92
MMP11-208ENST00000477567 SULT6B1Q6IMI4 303 aa20.81■□□□□ 0.92
MMP11-208ENST00000477567 BARGINQ6ZT62 677 aa20.81■□□□□ 0.92
MMP11-208ENST00000477567 TCP11L2Q8N4U5 519 aa20.81■□□□□ 0.92
MMP11-208ENST00000477567 GJD4Q96KN9 370 aaPredicted RBP20.81■□□□□ 0.92
MMP11-208ENST00000477567 QTRT2Q9H974 415 aaKnown RBP20.81■□□□□ 0.92
MMP11-208ENST00000477567 DISP2A7MBM2 1401 aa20.8■□□□□ 0.92
MMP11-208ENST00000477567 AEBP1Q8IUX7 1158 aa20.8■□□□□ 0.92
MMP11-208ENST00000477567 USHBP1Q8N6Y0 703 aa20.8■□□□□ 0.92
MMP11-208ENST00000477567 ADAMTS8Q9UP79 889 aa20.8■□□□□ 0.92
MMP11-208ENST00000477567 RSPH6AQ9H0K4 717 aa20.79■□□□□ 0.92
MMP11-208ENST00000477567 HMOX1P09601 288 aa20.78■□□□□ 0.92
MMP11-208ENST00000477567 PKD1L3Q7Z443 1732 aa20.78■□□□□ 0.92
MMP11-208ENST00000477567 THSD7AQ9UPZ6 1657 aa20.77■□□□□ 0.92
MMP11-208ENST00000477567 ONECUT3O60422 494 aaPredicted RBP20.77■□□□□ 0.92
MMP11-208ENST00000477567 CDCA7Q9BWT1 371 aaPredicted RBP20.77■□□□□ 0.92
MMP11-208ENST00000477567 CCDC9Q9Y3X0 531 aaKnown RBP20.77■□□□□ 0.92
MMP11-208ENST00000477567 MEGF6O75095 1541 aa20.77■□□□□ 0.92
MMP11-208ENST00000477567 PLEKHF1Q96S99 279 aa20.76■□□□□ 0.91
MMP11-208ENST00000477567 PNNQ9H307 717 aaKnown RBP20.76■□□□□ 0.91
MMP11-208ENST00000477567 USP35Q9P2H5 1018 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms