RNA–Protein interactions for RNA: ENST00000474194.1

RFWD2-207, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 3

Gene RFWD2, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-207ENST00000474194 MAP3K19Q56UN5 1328 aa34.55■■■■□ 3.12
RFWD2-207ENST00000474194 RRS1Q15050 365 aaKnown RBP34.54■■■■□ 3.12
RFWD2-207ENST00000474194 VPS72Q15906 364 aa34.53■■■■□ 3.12
RFWD2-207ENST00000474194 STRN4Q9NRL3 753 aa34.52■■■■□ 3.12
RFWD2-207ENST00000474194 NPC1L1Q9UHC9 1359 aa34.51■■■■□ 3.12
RFWD2-207ENST00000474194 PEAK1Q9H792 1746 aa34.5■■■■□ 3.11
RFWD2-207ENST00000474194 GLI3P10071 1580 aa34.5■■■■□ 3.11
RFWD2-207ENST00000474194 MAP2P11137 1827 aaKnown RBP34.5■■■■□ 3.11
RFWD2-207ENST00000474194 ZNF316A6NFI3 1004 aaPredicted RBP34.49■■■■□ 3.11
RFWD2-207ENST00000474194 DDX10Q13206 875 aaKnown RBP34.49■■■■□ 3.11
RFWD2-207ENST00000474194 CC2D1BQ5T0F9 858 aaKnown RBP34.49■■■■□ 3.11
RFWD2-207ENST00000474194 MORC1Q86VD1 984 aa34.49■■■■□ 3.11
RFWD2-207ENST00000474194 TNNT2P45379 298 aaPredicted RBP34.48■■■■□ 3.11
RFWD2-207ENST00000474194 EVA1CP58658 441 aa34.48■■■■□ 3.11
RFWD2-207ENST00000474194 RXRBP28702 533 aa34.47■■■■□ 3.11
RFWD2-207ENST00000474194 RBM6P78332 1123 aaKnown RBP34.47■■■■□ 3.11
RFWD2-207ENST00000474194 IP6K1Q92551 441 aa34.47■■■■□ 3.11
RFWD2-207ENST00000474194 GJD4Q96KN9 370 aaPredicted RBP34.47■■■■□ 3.11
RFWD2-207ENST00000474194 RTL1A6NKG5 1358 aa34.47■■■■□ 3.11
RFWD2-207ENST00000474194 AMPHP49418 695 aa34.46■■■■□ 3.11
RFWD2-207ENST00000474194 BLMP54132 1417 aaPredicted RBP34.46■■■■□ 3.11
RFWD2-207ENST00000474194 HOXC9P31274 260 aa34.45■■■■□ 3.11
RFWD2-207ENST00000474194 LARP1Q6PKG0 1096 aaKnown RBP34.45■■■■□ 3.11
RFWD2-207ENST00000474194 CCDC9Q9Y3X0 531 aaKnown RBP34.45■■■■□ 3.11
RFWD2-207ENST00000474194 EMILIN1Q9Y6C2 1016 aa34.45■■■■□ 3.11
RFWD2-207ENST00000474194 SPATA31A5Q5VU36 1347 aa34.43■■■■□ 3.1
RFWD2-207ENST00000474194 SPATA31A7Q8IWB4 1347 aa34.43■■■■□ 3.1
RFWD2-207ENST00000474194 KIF24Q5T7B8 1368 aa34.42■■■■□ 3.1
RFWD2-207ENST00000474194 CNGB1Q14028 1251 aaPredicted RBP34.42■■■■□ 3.1
RFWD2-207ENST00000474194 FLT4P35916 1363 aa34.41■■■■□ 3.1
RFWD2-207ENST00000474194 ERBB3P21860 1342 aa34.41■■■■□ 3.1
RFWD2-207ENST00000474194 WDR17Q8IZU2 1322 aa34.41■■■■□ 3.1
RFWD2-207ENST00000474194 ILDR2Q71H61 639 aa34.41■■■■□ 3.1
RFWD2-207ENST00000474194 POLKQ9UBT6 870 aa34.41■■■■□ 3.1
RFWD2-207ENST00000474194 CRB1P82279 1406 aa34.39■■■■□ 3.1
RFWD2-207ENST00000474194 SPATA31A1Q5TZJ5 1347 aa34.39■■■■□ 3.1
RFWD2-207ENST00000474194 CDK12Q9NYV4 1490 aaPredicted RBP34.39■■■■□ 3.1
RFWD2-207ENST00000474194 SMG6Q86US8 1419 aaKnown RBP34.38■■■■□ 3.09
RFWD2-207ENST00000474194 ANKRD24Q8TF21 1146 aa34.38■■■■□ 3.09
RFWD2-207ENST00000474194 CSB-PGBD3P0DP91 1061 aa34.36■■■■□ 3.09
RFWD2-207ENST00000474194 RGS12O14924 1447 aa34.36■■■■□ 3.09
RFWD2-207ENST00000474194 PPM1GO15355 546 aaPredicted RBP34.35■■■■□ 3.09
RFWD2-207ENST00000474194 HSP90AB2PQ58FF8 381 aa34.35■■■■□ 3.09
RFWD2-207ENST00000474194 TOM1L2Q6ZVM7 507 aa34.35■■■■□ 3.09
RFWD2-207ENST00000474194 INSRP06213 1382 aa34.35■■■■□ 3.09
RFWD2-207ENST00000474194 FAM208AQ9UK61 1670 aaKnown RBP34.35■■■■□ 3.09
RFWD2-207ENST00000474194 LTV1Q96GA3 475 aaPredicted RBP34.34■■■■□ 3.09
RFWD2-207ENST00000474194 USP35Q9P2H5 1018 aa34.34■■■■□ 3.09
RFWD2-207ENST00000474194 RGPD2P0DJD1 1756 aa34.31■■■■□ 3.08
RFWD2-207ENST00000474194 FAM98CQ17RN3 349 aaKnown RBP34.3■■■■□ 3.08
RFWD2-207ENST00000474194 THSD7AQ9UPZ6 1657 aa34.29■■■■□ 3.08
RFWD2-207ENST00000474194 TCP11L2Q8N4U5 519 aa34.29■■■■□ 3.08
RFWD2-207ENST00000474194 WNK3Q9BYP7 1800 aa34.28■■■■□ 3.08
RFWD2-207ENST00000474194 ONECUT3O60422 494 aaPredicted RBP34.28■■■■□ 3.08
RFWD2-207ENST00000474194 CARD10Q9BWT7 1032 aa34.28■■■■□ 3.08
RFWD2-207ENST00000474194 NLRP2Q9NX02 1062 aa34.27■■■■□ 3.08
RFWD2-207ENST00000474194 BARGINQ6ZT62 677 aa34.26■■■■□ 3.08
RFWD2-207ENST00000474194 THRAP3Q9Y2W1 955 aaKnown RBP34.26■■■■□ 3.08
RFWD2-207ENST00000474194 PARD3Q8TEW0 1356 aa34.24■■■■□ 3.07
RFWD2-207ENST00000474194 BRWD3Q6RI45 1802 aa34.23■■■■□ 3.07
RFWD2-207ENST00000474194 MTHFSP49914 203 aa34.23■■■■□ 3.07
RFWD2-207ENST00000474194 SEPT12Q8IYM1 358 aa34.23■■■■□ 3.07
RFWD2-207ENST00000474194 PARP4Q9UKK3 1724 aaKnown RBP34.19■■■■□ 3.06
RFWD2-207ENST00000474194 A0A0G2JS52 829 aa34.19■■■■□ 3.06
RFWD2-207ENST00000474194 MYT1Q01538 1121 aa34.19■■■■□ 3.06
RFWD2-207ENST00000474194 NBPF6Q5VWK0 638 aa34.19■■■■□ 3.06
RFWD2-207ENST00000474194 NBPF4Q96M43 638 aa34.19■■■■□ 3.06
RFWD2-207ENST00000474194 DISP2A7MBM2 1401 aa34.19■■■■□ 3.06
RFWD2-207ENST00000474194 EIF4A2Q14240 407 aaKnown RBP34.18■■■■□ 3.06
RFWD2-207ENST00000474194 PPP2R1AP30153 589 aa34.17■■■■□ 3.06
RFWD2-207ENST00000474194 LRRC37A3O60309 1634 aa34.15■■■■□ 3.06
RFWD2-207ENST00000474194 USHBP1Q8N6Y0 703 aa34.14■■■■□ 3.06
RFWD2-207ENST00000474194 COL3A1P02461 1466 aaPredicted RBP34.13■■■■□ 3.05
RFWD2-207ENST00000474194 RALBP1Q15311 655 aa34.12■■■■□ 3.05
RFWD2-207ENST00000474194 NCAPD2Q15021 1401 aa34.12■■■■□ 3.05
RFWD2-207ENST00000474194 CDCA7Q9BWT1 371 aaPredicted RBP34.11■■■■□ 3.05
RFWD2-207ENST00000474194 EYA1Q99502 592 aa34.1■■■■□ 3.05
RFWD2-207ENST00000474194 IL2RBP14784 551 aa34.09■■■■□ 3.05
RFWD2-207ENST00000474194 RGPD1P0DJD0 1748 aa34.09■■■■□ 3.05
RFWD2-207ENST00000474194 IL13P35225 146 aa34.08■■■■□ 3.05
RFWD2-207ENST00000474194 KRT27Q7Z3Y8 459 aa34.07■■■■□ 3.04
RFWD2-207ENST00000474194 MEGF6O75095 1541 aa34.07■■■■□ 3.04
RFWD2-207ENST00000474194 IGSF1Q8N6C5 1336 aa34.05■■■■□ 3.04
RFWD2-207ENST00000474194 DDB1Q16531 1140 aa34.04■■■■□ 3.04
RFWD2-207ENST00000474194 PRKRIP1Q9H875 184 aaPredicted RBP34.04■■■■□ 3.04
RFWD2-207ENST00000474194 DIAPH1O60610 1272 aaKnown RBP34.03■■■■□ 3.04
RFWD2-207ENST00000474194 TNS2Q63HR2 1409 aa34.03■■■■□ 3.04
RFWD2-207ENST00000474194 OVOS2A0A0G2JMS6 1433 aa34.01■■■■□ 3.03
RFWD2-207ENST00000474194 PDE3BQ13370 1112 aa34■■■■□ 3.03
RFWD2-207ENST00000474194 CFAP53Q96M91 514 aa34■■■■□ 3.03
RFWD2-207ENST00000474194 MYBBP1AQ9BQG0 1328 aaKnown RBP34■■■■□ 3.03
RFWD2-207ENST00000474194 RAPGEF4Q8WZA2 1011 aa33.98■■■■□ 3.03
RFWD2-207ENST00000474194 SHANK3Q9BYB0 1731 aa33.98■■■■□ 3.03
RFWD2-207ENST00000474194 EXOC5O00471 708 aa33.97■■■■□ 3.03
RFWD2-207ENST00000474194 FAM182BQ5T319 152 aa33.97■■■■□ 3.03
RFWD2-207ENST00000474194 EP400Q96L91 3159 aa33.97■■■■□ 3.03
RFWD2-207ENST00000474194 TATP17735 454 aaPredicted RBP33.96■■■■□ 3.03
RFWD2-207ENST00000474194 AEBP1Q8IUX7 1158 aa33.96■■■■□ 3.03
RFWD2-207ENST00000474194 KDRP35968 1356 aa33.94■■■■□ 3.02
RFWD2-207ENST00000474194 PKD1L3Q7Z443 1732 aa33.93■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms