RNA–Protein interactions for RNA: ENST00000471294.1

HDLBP-234, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-234ENST00000471294 LMO7Q8WWI1 1683 aa16.14■□□□□ 0.18
HDLBP-234ENST00000471294 COL14A1Q05707 1796 aaKnown RBP16.14■□□□□ 0.17
HDLBP-234ENST00000471294 SOX12O15370 315 aa16.13■□□□□ 0.17
HDLBP-234ENST00000471294 IL13P35225 146 aa16.13■□□□□ 0.17
HDLBP-234ENST00000471294 ZC3H6P61129 1189 aaKnown RBP16.13■□□□□ 0.17
HDLBP-234ENST00000471294 PRDM11Q9NQV5 511 aa16.13■□□□□ 0.17
HDLBP-234ENST00000471294 PLEKHG2Q9H7P9 1386 aa16.13■□□□□ 0.17
HDLBP-234ENST00000471294 PPM1GO15355 546 aaPredicted RBP16.12■□□□□ 0.17
HDLBP-234ENST00000471294 CCDC184Q52MB2 194 aa16.12■□□□□ 0.17
HDLBP-234ENST00000471294 HSP90AB2PQ58FF8 381 aa16.12■□□□□ 0.17
HDLBP-234ENST00000471294 FAM208AQ9UK61 1670 aaKnown RBP16.11■□□□□ 0.17
HDLBP-234ENST00000471294 ERBB3P21860 1342 aa16.11■□□□□ 0.17
HDLBP-234ENST00000471294 EIF4A2Q14240 407 aaKnown RBP16.1■□□□□ 0.17
HDLBP-234ENST00000471294 PNNQ9H307 717 aaKnown RBP16.1■□□□□ 0.17
HDLBP-234ENST00000471294 RGPD1P0DJD0 1748 aa16.1■□□□□ 0.17
HDLBP-234ENST00000471294 NWD2Q9ULI1 1742 aa16.1■□□□□ 0.17
HDLBP-234ENST00000471294 NCAPD2Q15021 1401 aa16.1■□□□□ 0.17
HDLBP-234ENST00000471294 FAM83GA6ND36 823 aa16.09■□□□□ 0.17
HDLBP-234ENST00000471294 WDR43Q15061 677 aaKnown RBP eCLIP16.09■□□□□ 0.17
HDLBP-234ENST00000471294 AXIN2Q9Y2T1 843 aa16.08■□□□□ 0.16
HDLBP-234ENST00000471294 IGSF1Q8N6C5 1336 aa16.08■□□□□ 0.16
HDLBP-234ENST00000471294 KDRP35968 1356 aa16.08■□□□□ 0.16
HDLBP-234ENST00000471294 COL5A2P05997 1499 aaPredicted RBP16.08■□□□□ 0.16
HDLBP-234ENST00000471294 SLIT2O94813 1529 aa16.08■□□□□ 0.16
HDLBP-234ENST00000471294 CAMTA1Q9Y6Y1 1673 aa16.08■□□□□ 0.16
HDLBP-234ENST00000471294 FCHSD2O94868 740 aa16.07■□□□□ 0.16
HDLBP-234ENST00000471294 WDR17Q8IZU2 1322 aa16.06■□□□□ 0.16
HDLBP-234ENST00000471294 NCBP3Q53F19 620 aaKnown RBP16.06■□□□□ 0.16
HDLBP-234ENST00000471294 FNBP4Q8N3X1 1017 aaPredicted RBP16.06■□□□□ 0.16
HDLBP-234ENST00000471294 ANKRD24Q8TF21 1146 aa16.06■□□□□ 0.16
HDLBP-234ENST00000471294 RGPD5Q99666 1765 aa16.05■□□□□ 0.16
HDLBP-234ENST00000471294 CHRNA2Q15822 529 aa16.05■□□□□ 0.16
HDLBP-234ENST00000471294 LRP6O75581 1613 aa16.05■□□□□ 0.16
HDLBP-234ENST00000471294 U2AF1L5P0DN76 240 aaPredicted RBP16.04■□□□□ 0.16
HDLBP-234ENST00000471294 U2AF1Q01081 240 aaKnown RBP eCLIP16.04■□□□□ 0.16
HDLBP-234ENST00000471294 NGEFQ8N5V2 710 aa16.04■□□□□ 0.16
HDLBP-234ENST00000471294 EYA1Q99502 592 aa16.04■□□□□ 0.16
HDLBP-234ENST00000471294 ADAMTS8Q9UP79 889 aa16.04■□□□□ 0.16
HDLBP-234ENST00000471294 PLCH1Q4KWH8 1693 aa16.04■□□□□ 0.16
HDLBP-234ENST00000471294 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.03■□□□□ 0.16
HDLBP-234ENST00000471294 NUTM2BA6NNL0 878 aaPredicted RBP16.03■□□□□ 0.16
HDLBP-234ENST00000471294 NUTM2EB1AL46 878 aaPredicted RBP16.03■□□□□ 0.16
HDLBP-234ENST00000471294 PLEKHG5O94827 1062 aa16.03■□□□□ 0.16
HDLBP-234ENST00000471294 NUTM2AQ8IVF1 878 aaPredicted RBP16.03■□□□□ 0.16
HDLBP-234ENST00000471294 BTG4Q9NY30 223 aa16.03■□□□□ 0.16
HDLBP-234ENST00000471294 NRAPQ86VF7 1730 aa16.02■□□□□ 0.16
HDLBP-234ENST00000471294 ZBTB7CA1YPR0 619 aa16.02■□□□□ 0.16
HDLBP-234ENST00000471294 U2SURPO15042 1029 aaKnown RBP16.02■□□□□ 0.16
HDLBP-234ENST00000471294 ADAMTS2O95450 1211 aa16.02■□□□□ 0.16
HDLBP-234ENST00000471294 CARD10Q9BWT7 1032 aa16.02■□□□□ 0.16
HDLBP-234ENST00000471294 CRB1P82279 1406 aa16.02■□□□□ 0.15
HDLBP-234ENST00000471294 FAM9BQ8IZU0 186 aa16.01■□□□□ 0.15
HDLBP-234ENST00000471294 RSPH6AQ9H0K4 717 aa16.01■□□□□ 0.15
HDLBP-234ENST00000471294 EVA1CP58658 441 aa16■□□□□ 0.15
HDLBP-234ENST00000471294 NBPF6Q5VWK0 638 aa16■□□□□ 0.15
HDLBP-234ENST00000471294 UNC5CLQ8IV45 518 aa16■□□□□ 0.15
HDLBP-234ENST00000471294 RUNDC1Q96C34 613 aa16■□□□□ 0.15
HDLBP-234ENST00000471294 NBPF4Q96M43 638 aa16■□□□□ 0.15
HDLBP-234ENST00000471294 PLEKHF1Q96S99 279 aa16■□□□□ 0.15
HDLBP-234ENST00000471294 BCL9LQ86UU0 1499 aa15.99■□□□□ 0.15
HDLBP-234ENST00000471294 NEFMP07197 916 aa15.99■□□□□ 0.15
HDLBP-234ENST00000471294 CSB-PGBD3P0DP91 1061 aa15.99■□□□□ 0.15
HDLBP-234ENST00000471294 SULT6B1Q6IMI4 303 aa15.99■□□□□ 0.15
HDLBP-234ENST00000471294 NGLY1Q96IV0 654 aa15.99■□□□□ 0.15
HDLBP-234ENST00000471294 THRAP3Q9Y2W1 955 aaKnown RBP15.99■□□□□ 0.15
HDLBP-234ENST00000471294 LTV1Q96GA3 475 aaPredicted RBP15.98■□□□□ 0.15
HDLBP-234ENST00000471294 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.98■□□□□ 0.15
HDLBP-234ENST00000471294 VPS72Q15906 364 aa15.97■□□□□ 0.15
HDLBP-234ENST00000471294 MEX3CQ5U5Q3 659 aaKnown RBP15.97■□□□□ 0.15
HDLBP-234ENST00000471294 TOM1L2Q6ZVM7 507 aa15.97■□□□□ 0.15
HDLBP-234ENST00000471294 C8orf37Q96NL8 207 aa15.97■□□□□ 0.15
HDLBP-234ENST00000471294 CDCA7Q9BWT1 371 aaPredicted RBP15.97■□□□□ 0.15
HDLBP-234ENST00000471294 NLRP2Q9NX02 1062 aa15.97■□□□□ 0.15
HDLBP-234ENST00000471294 RGPD2P0DJD1 1756 aa15.97■□□□□ 0.15
HDLBP-234ENST00000471294 MAPK8IP3Q9UPT6 1336 aa15.95■□□□□ 0.14
HDLBP-234ENST00000471294 PRKAR2BP31323 418 aa15.95■□□□□ 0.14
HDLBP-234ENST00000471294 AMOTQ4VCS5 1084 aa15.95■□□□□ 0.14
HDLBP-234ENST00000471294 LARP1Q6PKG0 1096 aaKnown RBP15.95■□□□□ 0.14
HDLBP-234ENST00000471294 SPATA31A5Q5VU36 1347 aa15.94■□□□□ 0.14
HDLBP-234ENST00000471294 SPATA31A7Q8IWB4 1347 aa15.94■□□□□ 0.14
HDLBP-234ENST00000471294 HMOX1P09601 288 aa15.94■□□□□ 0.14
HDLBP-234ENST00000471294 BARGINQ6ZT62 677 aa15.94■□□□□ 0.14
HDLBP-234ENST00000471294 AEBP1Q8IUX7 1158 aa15.94■□□□□ 0.14
HDLBP-234ENST00000471294 STRN4Q9NRL3 753 aa15.94■□□□□ 0.14
HDLBP-234ENST00000471294 USP21Q9UK80 565 aa15.94■□□□□ 0.14
HDLBP-234ENST00000471294 SPATA31A1Q5TZJ5 1347 aa15.94■□□□□ 0.14
HDLBP-234ENST00000471294 CCDC27Q2M243 656 aa15.93■□□□□ 0.14
HDLBP-234ENST00000471294 TCP11L2Q8N4U5 519 aa15.93■□□□□ 0.14
HDLBP-234ENST00000471294 GAS2L2Q8NHY3 880 aa15.93■□□□□ 0.14
HDLBP-234ENST00000471294 RAPGEF4Q8WZA2 1011 aa15.93■□□□□ 0.14
HDLBP-234ENST00000471294 PARP4Q9UKK3 1724 aaKnown RBP15.93■□□□□ 0.14
HDLBP-234ENST00000471294 DISP2A7MBM2 1401 aa15.93■□□□□ 0.14
HDLBP-234ENST00000471294 AFF2P51816 1311 aa15.93■□□□□ 0.14
HDLBP-234ENST00000471294 TATP17735 454 aaPredicted RBP15.92■□□□□ 0.14
HDLBP-234ENST00000471294 TRPC5Q9UL62 973 aaPredicted RBP15.92■□□□□ 0.14
HDLBP-234ENST00000471294 OVOS2A0A0G2JMS6 1433 aa15.92■□□□□ 0.14
HDLBP-234ENST00000471294 ATRNO75882 1429 aa15.92■□□□□ 0.14
HDLBP-234ENST00000471294 HTATSF1O43719 755 aaKnown RBP15.91■□□□□ 0.14
HDLBP-234ENST00000471294 IL2RBP14784 551 aa15.91■□□□□ 0.14
HDLBP-234ENST00000471294 PLEKHO1Q53GL0 409 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms