RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 SMG6Q86US8 1419 aaKnown RBP14.32□□□□□ -0.12
SMC1A-206ENST00000470241 COL18A1P39060 1754 aa14.32□□□□□ -0.12
SMC1A-206ENST00000470241 ABCC6O95255 1503 aa14.32□□□□□ -0.12
SMC1A-206ENST00000470241 PPP2R1AP30153 589 aa14.32□□□□□ -0.12
SMC1A-206ENST00000470241 RALBP1Q15311 655 aa14.32□□□□□ -0.12
SMC1A-206ENST00000470241 UNC5CLQ8IV45 518 aa14.32□□□□□ -0.12
SMC1A-206ENST00000470241 RGS17Q9UGC6 210 aaPredicted RBP14.32□□□□□ -0.12
SMC1A-206ENST00000470241 FLT4P35916 1363 aa14.32□□□□□ -0.12
SMC1A-206ENST00000470241 COL5A2P05997 1499 aaPredicted RBP14.31□□□□□ -0.12
SMC1A-206ENST00000470241 PPM1GO15355 546 aaPredicted RBP14.31□□□□□ -0.12
SMC1A-206ENST00000470241 MTHFSP49914 203 aa14.31□□□□□ -0.12
SMC1A-206ENST00000470241 HSP90AB2PQ58FF8 381 aa14.31□□□□□ -0.12
SMC1A-206ENST00000470241 PRKRIP1Q9H875 184 aaPredicted RBP14.31□□□□□ -0.12
SMC1A-206ENST00000470241 PEAK1Q9H792 1746 aa14.31□□□□□ -0.12
SMC1A-206ENST00000470241 BLMP54132 1417 aaPredicted RBP14.3□□□□□ -0.12
SMC1A-206ENST00000470241 PLCH1Q4KWH8 1693 aa14.3□□□□□ -0.12
SMC1A-206ENST00000470241 LTN1O94822 1766 aa14.29□□□□□ -0.12
SMC1A-206ENST00000470241 ZNF772Q68DY9 489 aaPredicted RBP14.29□□□□□ -0.12
SMC1A-206ENST00000470241 PHF23Q9BUL5 403 aaPredicted RBP14.29□□□□□ -0.12
SMC1A-206ENST00000470241 STRN4Q9NRL3 753 aa14.29□□□□□ -0.12
SMC1A-206ENST00000470241 ERBB3P21860 1342 aa14.29□□□□□ -0.12
SMC1A-206ENST00000470241 INSRP06213 1382 aa14.29□□□□□ -0.12
SMC1A-206ENST00000470241 ATRNO75882 1429 aa14.28□□□□□ -0.12
SMC1A-206ENST00000470241 EVA1CP58658 441 aa14.28□□□□□ -0.12
SMC1A-206ENST00000470241 VPS72Q15906 364 aa14.28□□□□□ -0.12
SMC1A-206ENST00000470241 LARP1Q6PKG0 1096 aaKnown RBP14.28□□□□□ -0.12
SMC1A-206ENST00000470241 NRAPQ86VF7 1730 aa14.28□□□□□ -0.12
SMC1A-206ENST00000470241 ANKRD24Q8TF21 1146 aa14.28□□□□□ -0.12
SMC1A-206ENST00000470241 CDK12Q9NYV4 1490 aaPredicted RBP14.28□□□□□ -0.12
SMC1A-206ENST00000470241 NWD2Q9ULI1 1742 aa14.28□□□□□ -0.12
SMC1A-206ENST00000470241 WDR17Q8IZU2 1322 aa14.27□□□□□ -0.12
SMC1A-206ENST00000470241 LTV1Q96GA3 475 aaPredicted RBP14.27□□□□□ -0.13
SMC1A-206ENST00000470241 TRPC5Q9UL62 973 aaPredicted RBP14.27□□□□□ -0.13
SMC1A-206ENST00000470241 MYBBP1AQ9BQG0 1328 aaKnown RBP14.26□□□□□ -0.13
SMC1A-206ENST00000470241 ANP32CO43423 234 aa14.26□□□□□ -0.13
SMC1A-206ENST00000470241 POTEAQ6S8J7 498 aa14.26□□□□□ -0.13
SMC1A-206ENST00000470241 QTRT2Q9H974 415 aaKnown RBP14.26□□□□□ -0.13
SMC1A-206ENST00000470241 SPATA31A5Q5VU36 1347 aa14.25□□□□□ -0.13
SMC1A-206ENST00000470241 SPATA31A7Q8IWB4 1347 aa14.25□□□□□ -0.13
SMC1A-206ENST00000470241 CSB-PGBD3P0DP91 1061 aa14.25□□□□□ -0.13
SMC1A-206ENST00000470241 EIF4A2Q14240 407 aaKnown RBP14.25□□□□□ -0.13
SMC1A-206ENST00000470241 MAP2P11137 1827 aaKnown RBP14.25□□□□□ -0.13
SMC1A-206ENST00000470241 CRB1P82279 1406 aa14.24□□□□□ -0.13
SMC1A-206ENST00000470241 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.24□□□□□ -0.13
SMC1A-206ENST00000470241 TOM1L2Q6ZVM7 507 aa14.24□□□□□ -0.13
SMC1A-206ENST00000470241 COL3A1P02461 1466 aaPredicted RBP14.24□□□□□ -0.13
SMC1A-206ENST00000470241 SPATA31A1Q5TZJ5 1347 aa14.23□□□□□ -0.13
SMC1A-206ENST00000470241 IL13P35225 146 aa14.23□□□□□ -0.13
SMC1A-206ENST00000470241 NBPF6Q5VWK0 638 aa14.23□□□□□ -0.13
SMC1A-206ENST00000470241 DIEXFQ68CQ4 756 aaKnown RBP14.23□□□□□ -0.13
SMC1A-206ENST00000470241 GJD4Q96KN9 370 aaPredicted RBP14.23□□□□□ -0.13
SMC1A-206ENST00000470241 NBPF4Q96M43 638 aa14.23□□□□□ -0.13
SMC1A-206ENST00000470241 CARD10Q9BWT7 1032 aa14.23□□□□□ -0.13
SMC1A-206ENST00000470241 NLRP2Q9NX02 1062 aa14.23□□□□□ -0.13
SMC1A-206ENST00000470241 CCDC9Q9Y3X0 531 aaKnown RBP14.23□□□□□ -0.13
SMC1A-206ENST00000470241 RGPD5Q99666 1765 aa14.22□□□□□ -0.13
SMC1A-206ENST00000470241 DIAPH1O60610 1272 aaKnown RBP14.21□□□□□ -0.13
SMC1A-206ENST00000470241 RBM6P78332 1123 aaKnown RBP14.21□□□□□ -0.13
SMC1A-206ENST00000470241 CFAP53Q96M91 514 aa14.21□□□□□ -0.13
SMC1A-206ENST00000470241 EYA1Q99502 592 aa14.21□□□□□ -0.13
SMC1A-206ENST00000470241 USP35Q9P2H5 1018 aa14.21□□□□□ -0.13
SMC1A-206ENST00000470241 GLI3P10071 1580 aa14.21□□□□□ -0.14
SMC1A-206ENST00000470241 TCP11L2Q8N4U5 519 aa14.2□□□□□ -0.14
SMC1A-206ENST00000470241 USHBP1Q8N6Y0 703 aa14.2□□□□□ -0.14
SMC1A-206ENST00000470241 NCAPD2Q15021 1401 aa14.19□□□□□ -0.14
SMC1A-206ENST00000470241 RXRBP28702 533 aa14.19□□□□□ -0.14
SMC1A-206ENST00000470241 THRAP3Q9Y2W1 955 aaKnown RBP14.19□□□□□ -0.14
SMC1A-206ENST00000470241 IGSF1Q8N6C5 1336 aa14.18□□□□□ -0.14
SMC1A-206ENST00000470241 ONECUT3O60422 494 aaPredicted RBP14.18□□□□□ -0.14
SMC1A-206ENST00000470241 FAM98CQ17RN3 349 aaKnown RBP14.18□□□□□ -0.14
SMC1A-206ENST00000470241 CCDC184Q52MB2 194 aa14.18□□□□□ -0.14
SMC1A-206ENST00000470241 BARGINQ6ZT62 677 aa14.18□□□□□ -0.14
SMC1A-206ENST00000470241 DISP2A7MBM2 1401 aa14.17□□□□□ -0.14
SMC1A-206ENST00000470241 FAM208AQ9UK61 1670 aaKnown RBP14.17□□□□□ -0.14
SMC1A-206ENST00000470241 AEBP1Q8IUX7 1158 aa14.16□□□□□ -0.14
SMC1A-206ENST00000470241 U2SURPO15042 1029 aaKnown RBP14.15□□□□□ -0.14
SMC1A-206ENST00000470241 SULT6B1Q6IMI4 303 aa14.15□□□□□ -0.14
SMC1A-206ENST00000470241 NUDCQ9Y266 331 aa14.15□□□□□ -0.14
SMC1A-206ENST00000470241 RGPD1P0DJD0 1748 aa14.15□□□□□ -0.14
SMC1A-206ENST00000470241 KDRP35968 1356 aa14.14□□□□□ -0.15
SMC1A-206ENST00000470241 IL2RBP14784 551 aa14.14□□□□□ -0.15
SMC1A-206ENST00000470241 SEPT12Q8IYM1 358 aa14.14□□□□□ -0.15
SMC1A-206ENST00000470241 CDCA7Q9BWT1 371 aaPredicted RBP14.14□□□□□ -0.15
SMC1A-206ENST00000470241 MEGF6O75095 1541 aa14.14□□□□□ -0.15
SMC1A-206ENST00000470241 RGS12O14924 1447 aa14.14□□□□□ -0.15
SMC1A-206ENST00000470241 RGPD2P0DJD1 1756 aa14.14□□□□□ -0.15
SMC1A-206ENST00000470241 HMOX1P09601 288 aa14.13□□□□□ -0.15
SMC1A-206ENST00000470241 THSD7AQ9UPZ6 1657 aa14.13□□□□□ -0.15
SMC1A-206ENST00000470241 U2AF1L5P0DN76 240 aaPredicted RBP14.12□□□□□ -0.15
SMC1A-206ENST00000470241 U2AF1Q01081 240 aaKnown RBP eCLIP14.12□□□□□ -0.15
SMC1A-206ENST00000470241 MIER1Q8N108 512 aa14.12□□□□□ -0.15
SMC1A-206ENST00000470241 RAPGEF4Q8WZA2 1011 aa14.12□□□□□ -0.15
SMC1A-206ENST00000470241 MRS2Q9HD23 443 aa14.12□□□□□ -0.15
SMC1A-206ENST00000470241 OVOS2A0A0G2JMS6 1433 aa14.11□□□□□ -0.15
SMC1A-206ENST00000470241 A0A0G2JS52 829 aa14.11□□□□□ -0.15
SMC1A-206ENST00000470241 TATP17735 454 aaPredicted RBP14.11□□□□□ -0.15
SMC1A-206ENST00000470241 MYT1Q01538 1121 aa14.11□□□□□ -0.15
SMC1A-206ENST00000470241 DDB1Q16531 1140 aa14.1□□□□□ -0.15
SMC1A-206ENST00000470241 RSPH6AQ9H0K4 717 aa14.1□□□□□ -0.15
SMC1A-206ENST00000470241 CCER2I3L3R5 266 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms