RNA–Protein interactions for RNA: ENST00000468965.2

SCAP-210, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-210ENST00000468965 RTL1A6NKG5 1358 aa17.78■□□□□ 0.44
SCAP-210ENST00000468965 RGPD2P0DJD1 1756 aa17.77■□□□□ 0.44
SCAP-210ENST00000468965 RALBP1Q15311 655 aa17.77■□□□□ 0.44
SCAP-210ENST00000468965 AXIN2Q9Y2T1 843 aa17.77■□□□□ 0.44
SCAP-210ENST00000468965 PPP2R1AP30153 589 aa17.76■□□□□ 0.43
SCAP-210ENST00000468965 CDK12Q9NYV4 1490 aaPredicted RBP17.75■□□□□ 0.43
SCAP-210ENST00000468965 HOXC9P31274 260 aa17.75■□□□□ 0.43
SCAP-210ENST00000468965 AMPHP49418 695 aa17.75■□□□□ 0.43
SCAP-210ENST00000468965 IP6K1Q92551 441 aa17.75■□□□□ 0.43
SCAP-210ENST00000468965 NGLY1Q96IV0 654 aa17.75■□□□□ 0.43
SCAP-210ENST00000468965 FLT4P35916 1363 aa17.75■□□□□ 0.43
SCAP-210ENST00000468965 KIF24Q5T7B8 1368 aa17.75■□□□□ 0.43
SCAP-210ENST00000468965 MTHFSP49914 203 aa17.74■□□□□ 0.43
SCAP-210ENST00000468965 FNBP4Q8N3X1 1017 aaPredicted RBP17.74■□□□□ 0.43
SCAP-210ENST00000468965 COL5A2P05997 1499 aaPredicted RBP17.74■□□□□ 0.43
SCAP-210ENST00000468965 BCL9LQ86UU0 1499 aa17.74■□□□□ 0.43
SCAP-210ENST00000468965 AFF2P51816 1311 aa17.73■□□□□ 0.43
SCAP-210ENST00000468965 BLMP54132 1417 aaPredicted RBP17.73■□□□□ 0.43
SCAP-210ENST00000468965 PPM1GO15355 546 aaPredicted RBP17.73■□□□□ 0.43
SCAP-210ENST00000468965 DIEXFQ68CQ4 756 aaKnown RBP17.73■□□□□ 0.43
SCAP-210ENST00000468965 BTG4Q9NY30 223 aa17.73■□□□□ 0.43
SCAP-210ENST00000468965 MYBBP1AQ9BQG0 1328 aaKnown RBP17.72■□□□□ 0.43
SCAP-210ENST00000468965 FAM208AQ9UK61 1670 aaKnown RBP17.72■□□□□ 0.43
SCAP-210ENST00000468965 COL3A1P02461 1466 aaPredicted RBP17.72■□□□□ 0.43
SCAP-210ENST00000468965 INSRP06213 1382 aa17.72■□□□□ 0.43
SCAP-210ENST00000468965 HSP90AB2PQ58FF8 381 aa17.72■□□□□ 0.43
SCAP-210ENST00000468965 ANP32CO43423 234 aa17.71■□□□□ 0.43
SCAP-210ENST00000468965 ERBB3P21860 1342 aa17.7■□□□□ 0.42
SCAP-210ENST00000468965 UNC5CLQ8IV45 518 aa17.69■□□□□ 0.42
SCAP-210ENST00000468965 ANKRD24Q8TF21 1146 aa17.69■□□□□ 0.42
SCAP-210ENST00000468965 RGPD1P0DJD0 1748 aa17.68■□□□□ 0.42
SCAP-210ENST00000468965 LTV1Q96GA3 475 aaPredicted RBP17.68■□□□□ 0.42
SCAP-210ENST00000468965 STRN4Q9NRL3 753 aa17.68■□□□□ 0.42
SCAP-210ENST00000468965 USP21Q9UK80 565 aa17.68■□□□□ 0.42
SCAP-210ENST00000468965 ATRNO75882 1429 aa17.67■□□□□ 0.42
SCAP-210ENST00000468965 EIF4A2Q14240 407 aaKnown RBP17.67■□□□□ 0.42
SCAP-210ENST00000468965 RGS17Q9UGC6 210 aaPredicted RBP17.67■□□□□ 0.42
SCAP-210ENST00000468965 WNK3Q9BYP7 1800 aa17.67■□□□□ 0.42
SCAP-210ENST00000468965 WDR17Q8IZU2 1322 aa17.67■□□□□ 0.42
SCAP-210ENST00000468965 LARP1Q6PKG0 1096 aaKnown RBP17.66■□□□□ 0.42
SCAP-210ENST00000468965 EVA1CP58658 441 aa17.65■□□□□ 0.42
SCAP-210ENST00000468965 GLI3P10071 1580 aa17.65■□□□□ 0.42
SCAP-210ENST00000468965 CRB1P82279 1406 aa17.64■□□□□ 0.42
SCAP-210ENST00000468965 VPS72Q15906 364 aa17.64■□□□□ 0.41
SCAP-210ENST00000468965 CSB-PGBD3P0DP91 1061 aa17.63■□□□□ 0.41
SCAP-210ENST00000468965 IL13P35225 146 aa17.63■□□□□ 0.41
SCAP-210ENST00000468965 CCDC184Q52MB2 194 aa17.63■□□□□ 0.41
SCAP-210ENST00000468965 ZNF772Q68DY9 489 aaPredicted RBP17.62■□□□□ 0.41
SCAP-210ENST00000468965 CFAP53Q96M91 514 aa17.62■□□□□ 0.41
SCAP-210ENST00000468965 PHF23Q9BUL5 403 aaPredicted RBP17.62■□□□□ 0.41
SCAP-210ENST00000468965 SPATA31A5Q5VU36 1347 aa17.62■□□□□ 0.41
SCAP-210ENST00000468965 SPATA31A7Q8IWB4 1347 aa17.62■□□□□ 0.41
SCAP-210ENST00000468965 NCAPD2Q15021 1401 aa17.62■□□□□ 0.41
SCAP-210ENST00000468965 DIAPH1O60610 1272 aaKnown RBP17.61■□□□□ 0.41
SCAP-210ENST00000468965 NBPF6Q5VWK0 638 aa17.61■□□□□ 0.41
SCAP-210ENST00000468965 TOM1L2Q6ZVM7 507 aa17.61■□□□□ 0.41
SCAP-210ENST00000468965 NBPF4Q96M43 638 aa17.61■□□□□ 0.41
SCAP-210ENST00000468965 EYA1Q99502 592 aa17.61■□□□□ 0.41
SCAP-210ENST00000468965 QTRT2Q9H974 415 aaKnown RBP17.61■□□□□ 0.41
SCAP-210ENST00000468965 TRPC5Q9UL62 973 aaPredicted RBP17.61■□□□□ 0.41
SCAP-210ENST00000468965 SPATA31A1Q5TZJ5 1347 aa17.61■□□□□ 0.41
SCAP-210ENST00000468965 POTEAQ6S8J7 498 aa17.6■□□□□ 0.41
SCAP-210ENST00000468965 CARD10Q9BWT7 1032 aa17.6■□□□□ 0.41
SCAP-210ENST00000468965 NLRP2Q9NX02 1062 aa17.6■□□□□ 0.41
SCAP-210ENST00000468965 IGSF1Q8N6C5 1336 aa17.6■□□□□ 0.41
SCAP-210ENST00000468965 MIER1Q8N108 512 aa17.59■□□□□ 0.41
SCAP-210ENST00000468965 USHBP1Q8N6Y0 703 aa17.59■□□□□ 0.41
SCAP-210ENST00000468965 GJD4Q96KN9 370 aaPredicted RBP17.58■□□□□ 0.4
SCAP-210ENST00000468965 USP35Q9P2H5 1018 aa17.58■□□□□ 0.4
SCAP-210ENST00000468965 CCDC9Q9Y3X0 531 aaKnown RBP17.58■□□□□ 0.4
SCAP-210ENST00000468965 THSD7AQ9UPZ6 1657 aa17.57■□□□□ 0.4
SCAP-210ENST00000468965 DISP2A7MBM2 1401 aa17.56■□□□□ 0.4
SCAP-210ENST00000468965 PARP4Q9UKK3 1724 aaKnown RBP17.56■□□□□ 0.4
SCAP-210ENST00000468965 TCP11L2Q8N4U5 519 aa17.56■□□□□ 0.4
SCAP-210ENST00000468965 BRWD3Q6RI45 1802 aa17.56■□□□□ 0.4
SCAP-210ENST00000468965 AEBP1Q8IUX7 1158 aa17.55■□□□□ 0.4
SCAP-210ENST00000468965 MEGF6O75095 1541 aa17.55■□□□□ 0.4
SCAP-210ENST00000468965 SHANK3Q9BYB0 1731 aa17.55■□□□□ 0.4
SCAP-210ENST00000468965 KDRP35968 1356 aa17.54■□□□□ 0.4
SCAP-210ENST00000468965 U2SURPO15042 1029 aaKnown RBP17.54■□□□□ 0.4
SCAP-210ENST00000468965 MRS2Q9HD23 443 aa17.54■□□□□ 0.4
SCAP-210ENST00000468965 NUDCQ9Y266 331 aa17.54■□□□□ 0.4
SCAP-210ENST00000468965 THRAP3Q9Y2W1 955 aaKnown RBP17.54■□□□□ 0.4
SCAP-210ENST00000468965 LRRC37A3O60309 1634 aa17.54■□□□□ 0.4
SCAP-210ENST00000468965 PKD1L3Q7Z443 1732 aa17.53■□□□□ 0.4
SCAP-210ENST00000468965 RBM6P78332 1123 aaKnown RBP17.53■□□□□ 0.4
SCAP-210ENST00000468965 SULT6B1Q6IMI4 303 aa17.53■□□□□ 0.4
SCAP-210ENST00000468965 BARGINQ6ZT62 677 aa17.53■□□□□ 0.4
SCAP-210ENST00000468965 CCER2I3L3R5 266 aa17.52■□□□□ 0.4
SCAP-210ENST00000468965 HMOX1P09601 288 aa17.52■□□□□ 0.4
SCAP-210ENST00000468965 FAM98CQ17RN3 349 aaKnown RBP17.52■□□□□ 0.4
SCAP-210ENST00000468965 U2AF1L5P0DN76 240 aaPredicted RBP17.51■□□□□ 0.39
SCAP-210ENST00000468965 U2AF1Q01081 240 aaKnown RBP eCLIP17.51■□□□□ 0.39
SCAP-210ENST00000468965 OVOS2A0A0G2JMS6 1433 aa17.5■□□□□ 0.39
SCAP-210ENST00000468965 ONECUT3O60422 494 aaPredicted RBP17.5■□□□□ 0.39
SCAP-210ENST00000468965 IL2RBP14784 551 aa17.5■□□□□ 0.39
SCAP-210ENST00000468965 RXRBP28702 533 aa17.5■□□□□ 0.39
SCAP-210ENST00000468965 PNISRQ8TF01 805 aaKnown RBP17.49■□□□□ 0.39
SCAP-210ENST00000468965 RSPH6AQ9H0K4 717 aa17.49■□□□□ 0.39
SCAP-210ENST00000468965 RGS12O14924 1447 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms