RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 IGHA1P01876 353 aa11.19□□□□□ -0.62
XRN1-206ENST00000467077 IRS1P35568 1242 aa11.19□□□□□ -0.62
XRN1-206ENST00000467077 MARSP56192 900 aaKnown RBP11.19□□□□□ -0.62
XRN1-206ENST00000467077 BARGINQ6ZT62 677 aa11.19□□□□□ -0.62
XRN1-206ENST00000467077 HELBQ8NG08 1087 aaPredicted RBP11.19□□□□□ -0.62
XRN1-206ENST00000467077 CARD14Q9BXL6 1004 aa11.19□□□□□ -0.62
XRN1-206ENST00000467077 KANK3Q6NY19 840 aa11.17□□□□□ -0.62
XRN1-206ENST00000467077 SH3BP5LQ7L8J4 393 aa11.17□□□□□ -0.62
XRN1-206ENST00000467077 SPINT1O43278 529 aa11.16□□□□□ -0.62
XRN1-206ENST00000467077 FOXK2Q01167 660 aa11.16□□□□□ -0.62
XRN1-206ENST00000467077 RNFT1Q5M7Z0 435 aa11.16□□□□□ -0.62
XRN1-206ENST00000467077 PARP9Q8IXQ6 854 aa11.16□□□□□ -0.62
XRN1-206ENST00000467077 ITGA6P23229 1130 aa11.15□□□□□ -0.62
XRN1-206ENST00000467077 PPP1R26Q5T8A7 1209 aaPredicted RBP11.15□□□□□ -0.62
XRN1-206ENST00000467077 SV2AQ7L0J3 742 aa11.15□□□□□ -0.62
XRN1-206ENST00000467077 ZMYND10O75800 440 aa11.14□□□□□ -0.63
XRN1-206ENST00000467077 SLURP2P0DP57 97 aa11.14□□□□□ -0.63
XRN1-206ENST00000467077 GPKOWQ92917 476 aaPredicted RBP eCLIP11.14□□□□□ -0.63
XRN1-206ENST00000467077 SCARF2Q96GP6 870 aaPredicted RBP11.14□□□□□ -0.63
XRN1-206ENST00000467077 SLC35F4A4IF30 521 aa11.13□□□□□ -0.63
XRN1-206ENST00000467077 CBLBQ13191 982 aa11.13□□□□□ -0.63
XRN1-206ENST00000467077 Q6ZVU0 165 aa11.13□□□□□ -0.63
XRN1-206ENST00000467077 VWA5B2Q8N398 1253 aa11.13□□□□□ -0.63
XRN1-206ENST00000467077 VSIG10Q8N0Z9 540 aa11.12□□□□□ -0.63
XRN1-206ENST00000467077 SLC10A4Q96EP9 437 aa11.12□□□□□ -0.63
XRN1-206ENST00000467077 MAP3K10Q02779 954 aa11.11□□□□□ -0.63
XRN1-206ENST00000467077 DHX9Q08211 1270 aaKnown RBP11.11□□□□□ -0.63
XRN1-206ENST00000467077 ERFEQ4G0M1 354 aa11.11□□□□□ -0.63
XRN1-206ENST00000467077 WHAMMQ8TF30 809 aa11.11□□□□□ -0.63
XRN1-206ENST00000467077 CDV3Q9UKY7 258 aaKnown RBP11.11□□□□□ -0.63
XRN1-206ENST00000467077 QPCTQ16769 361 aa11.1□□□□□ -0.63
XRN1-206ENST00000467077 ARHGEF15O94989 841 aa11.09□□□□□ -0.63
XRN1-206ENST00000467077 POLMQ9NP87 494 aaPredicted RBP11.09□□□□□ -0.63
XRN1-206ENST00000467077 ARHGAP9Q9BRR9 750 aa11.08□□□□□ -0.64
XRN1-206ENST00000467077 LIMD1Q9UGP4 676 aa11.08□□□□□ -0.64
XRN1-206ENST00000467077 RELBQ01201 579 aa11.07□□□□□ -0.64
XRN1-206ENST00000467077 TUSC1Q2TAM9 212 aa11.07□□□□□ -0.64
XRN1-206ENST00000467077 KCTD15Q96SI1 283 aaPredicted RBP11.07□□□□□ -0.64
XRN1-206ENST00000467077 LILRB3O75022 631 aa11.06□□□□□ -0.64
XRN1-206ENST00000467077 ADAMTS2O95450 1211 aa11.06□□□□□ -0.64
XRN1-206ENST00000467077 CTSOP43234 321 aaPredicted RBP11.06□□□□□ -0.64
XRN1-206ENST00000467077 MYSM1Q5VVJ2 828 aa11.06□□□□□ -0.64
XRN1-206ENST00000467077 ZC3H15Q8WU90 426 aaKnown RBP11.06□□□□□ -0.64
XRN1-206ENST00000467077 INSM2Q96T92 566 aaPredicted RBP11.06□□□□□ -0.64
XRN1-206ENST00000467077 AGBL1Q96MI9 1066 aa11.05□□□□□ -0.64
XRN1-206ENST00000467077 ZBTB33Q86T24 672 aa11.04□□□□□ -0.64
XRN1-206ENST00000467077 ENAMQ9NRM1 1142 aa11.04□□□□□ -0.64
XRN1-206ENST00000467077 TRIM66O15016 1216 aa11.03□□□□□ -0.64
XRN1-206ENST00000467077 SRSF11Q05519 484 aaKnown RBP11.03□□□□□ -0.64
XRN1-206ENST00000467077 PDXDC2PQ6P474 469 aa11.02□□□□□ -0.65
XRN1-206ENST00000467077 RNF217Q8TC41 542 aa11.02□□□□□ -0.65
XRN1-206ENST00000467077 CLK2P49760 499 aaKnown RBP11□□□□□ -0.65
XRN1-206ENST00000467077 INTS6LQ5JSJ4 861 aaKnown RBP11□□□□□ -0.65
XRN1-206ENST00000467077 LYPD4Q6UWN0 246 aa11□□□□□ -0.65
XRN1-206ENST00000467077 PHF20L1A8MW92 1017 aa10.99□□□□□ -0.65
XRN1-206ENST00000467077 RTL5Q5HYW3 569 aaPredicted RBP10.99□□□□□ -0.65
XRN1-206ENST00000467077 AK7Q96M32 723 aa10.99□□□□□ -0.65
XRN1-206ENST00000467077 FKBPLQ9UIM3 349 aa10.99□□□□□ -0.65
XRN1-206ENST00000467077 PODNQ7Z5L7 613 aa10.98□□□□□ -0.65
XRN1-206ENST00000467077 ZNF395Q9H8N7 513 aaPredicted RBP10.98□□□□□ -0.65
XRN1-206ENST00000467077 SENP3-EIF4A1A0A087X0R7 540 aa10.97□□□□□ -0.65
XRN1-206ENST00000467077 MSTNO14793 375 aa10.97□□□□□ -0.65
XRN1-206ENST00000467077 CELA2BP08218 269 aaPredicted RBP10.97□□□□□ -0.65
XRN1-206ENST00000467077 NBPF20Q3BBV1 942 aa10.97□□□□□ -0.65
XRN1-206ENST00000467077 ZC3H4Q9UPT8 1303 aaKnown RBP10.97□□□□□ -0.65
XRN1-206ENST00000467077 ADH1AP07327 375 aa10.95□□□□□ -0.66
XRN1-206ENST00000467077 PTK2Q05397 1052 aa10.94□□□□□ -0.66
XRN1-206ENST00000467077 LYSMD3Q7Z3D4 306 aa10.94□□□□□ -0.66
XRN1-206ENST00000467077 PLA2G4EQ3MJ16 856 aa10.93□□□□□ -0.66
XRN1-206ENST00000467077 FOXD4L5Q5VV16 416 aaPredicted RBP10.93□□□□□ -0.66
XRN1-206ENST00000467077 FOXR1Q6PIV2 292 aa10.93□□□□□ -0.66
XRN1-206ENST00000467077 GALNT6Q8NCL4 622 aa10.93□□□□□ -0.66
XRN1-206ENST00000467077 RAB15P59190 212 aa10.92□□□□□ -0.66
XRN1-206ENST00000467077 CTDSPL2Q05D32 466 aa10.92□□□□□ -0.66
XRN1-206ENST00000467077 GAS6Q14393 721 aa10.92□□□□□ -0.66
XRN1-206ENST00000467077 ZNF784Q8NCA9 323 aaPredicted RBP10.92□□□□□ -0.66
XRN1-206ENST00000467077 NEDD1Q8NHV4 660 aa10.92□□□□□ -0.66
XRN1-206ENST00000467077 RSPH6AQ9H0K4 717 aa10.92□□□□□ -0.66
XRN1-206ENST00000467077 MBIPQ9NS73 344 aa10.92□□□□□ -0.66
XRN1-206ENST00000467077 ADAM23O75077 832 aa10.91□□□□□ -0.66
XRN1-206ENST00000467077 XP32Q5T750 250 aa10.91□□□□□ -0.66
XRN1-206ENST00000467077 PTGIRP43119 386 aa10.9□□□□□ -0.66
XRN1-206ENST00000467077 BEND7Q8N7W2 519 aaPredicted RBP10.9□□□□□ -0.66
XRN1-206ENST00000467077 TRIM52Q96A61 297 aa10.9□□□□□ -0.66
XRN1-206ENST00000467077 GMCL1Q96IK5 515 aa10.9□□□□□ -0.66
XRN1-206ENST00000467077 DCAF5Q96JK2 942 aa10.9□□□□□ -0.66
XRN1-206ENST00000467077 SPOCK3Q9BQ16 436 aa10.9□□□□□ -0.66
XRN1-206ENST00000467077 TMPRSS4Q9NRS4 437 aa10.9□□□□□ -0.66
XRN1-206ENST00000467077 PDE4DQ08499 809 aa10.89□□□□□ -0.67
XRN1-206ENST00000467077 PNMA1Q8ND90 353 aa10.89□□□□□ -0.67
XRN1-206ENST00000467077 ADAM32Q8TC27 787 aa10.89□□□□□ -0.67
XRN1-206ENST00000467077 CUEDC1Q9NWM3 386 aaPredicted RBP10.89□□□□□ -0.67
XRN1-206ENST00000467077 GPSM3Q9Y4H4 160 aa10.89□□□□□ -0.67
XRN1-206ENST00000467077 LRRN4Q8WUT4 740 aa10.88□□□□□ -0.67
XRN1-206ENST00000467077 POLR3EQ9NVU0 708 aa10.88□□□□□ -0.67
XRN1-206ENST00000467077 CNTNAP5Q8WYK1 1306 aa10.87□□□□□ -0.67
XRN1-206ENST00000467077 NR6A1Q15406 480 aa10.87□□□□□ -0.67
XRN1-206ENST00000467077 ZNF837Q96EG3 531 aaPredicted RBP10.87□□□□□ -0.67
XRN1-206ENST00000467077 IGF1RP08069 1367 aa10.87□□□□□ -0.67
XRN1-206ENST00000467077 BCRP11274 1271 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms