RNA–Protein interactions for RNA: ENST00000462440.5

PRUNE1-208, Transcript of prune exopolyphosphatase 1, humanhuman

TSL 5

Gene PRUNE1, Length 732 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-208ENST00000462440 RGPD2P0DJD1 1756 aa23.29■■□□□ 1.32
PRUNE1-208ENST00000462440 FAM83GA6ND36 823 aa23.28■■□□□ 1.32
PRUNE1-208ENST00000462440 ANP32CO43423 234 aa23.28■■□□□ 1.32
PRUNE1-208ENST00000462440 PPP2R1AP30153 589 aa23.28■■□□□ 1.32
PRUNE1-208ENST00000462440 MEX3CQ5U5Q3 659 aaKnown RBP23.28■■□□□ 1.32
PRUNE1-208ENST00000462440 FAM208AQ9UK61 1670 aaKnown RBP23.28■■□□□ 1.32
PRUNE1-208ENST00000462440 KIF24Q5T7B8 1368 aa23.27■■□□□ 1.32
PRUNE1-208ENST00000462440 FLT4P35916 1363 aa23.27■■□□□ 1.31
PRUNE1-208ENST00000462440 AMPHP49418 695 aa23.26■■□□□ 1.31
PRUNE1-208ENST00000462440 C8orf37Q96NL8 207 aa23.26■■□□□ 1.31
PRUNE1-208ENST00000462440 SLIT2O94813 1529 aa23.26■■□□□ 1.31
PRUNE1-208ENST00000462440 MYBBP1AQ9BQG0 1328 aaKnown RBP23.26■■□□□ 1.31
PRUNE1-208ENST00000462440 BLMP54132 1417 aaPredicted RBP23.25■■□□□ 1.31
PRUNE1-208ENST00000462440 PPM1GO15355 546 aaPredicted RBP23.25■■□□□ 1.31
PRUNE1-208ENST00000462440 HOXC9P31274 260 aa23.24■■□□□ 1.31
PRUNE1-208ENST00000462440 MTHFSP49914 203 aa23.24■■□□□ 1.31
PRUNE1-208ENST00000462440 IP6K1Q92551 441 aa23.24■■□□□ 1.31
PRUNE1-208ENST00000462440 COL5A2P05997 1499 aaPredicted RBP23.24■■□□□ 1.31
PRUNE1-208ENST00000462440 AXIN2Q9Y2T1 843 aa23.23■■□□□ 1.31
PRUNE1-208ENST00000462440 NGLY1Q96IV0 654 aa23.22■■□□□ 1.31
PRUNE1-208ENST00000462440 COL3A1P02461 1466 aaPredicted RBP23.22■■□□□ 1.31
PRUNE1-208ENST00000462440 BTG4Q9NY30 223 aa23.21■■□□□ 1.31
PRUNE1-208ENST00000462440 INSRP06213 1382 aa23.21■■□□□ 1.31
PRUNE1-208ENST00000462440 HSP90AB2PQ58FF8 381 aa23.2■■□□□ 1.3
PRUNE1-208ENST00000462440 RGPD1P0DJD0 1748 aa23.19■■□□□ 1.3
PRUNE1-208ENST00000462440 BCL9LQ86UU0 1499 aa23.18■■□□□ 1.3
PRUNE1-208ENST00000462440 AFF2P51816 1311 aa23.18■■□□□ 1.3
PRUNE1-208ENST00000462440 WNK3Q9BYP7 1800 aa23.18■■□□□ 1.3
PRUNE1-208ENST00000462440 FNBP4Q8N3X1 1017 aaPredicted RBP23.18■■□□□ 1.3
PRUNE1-208ENST00000462440 ERBB3P21860 1342 aa23.16■■□□□ 1.3
PRUNE1-208ENST00000462440 ANKRD24Q8TF21 1146 aa23.16■■□□□ 1.3
PRUNE1-208ENST00000462440 LTV1Q96GA3 475 aaPredicted RBP23.15■■□□□ 1.3
PRUNE1-208ENST00000462440 STRN4Q9NRL3 753 aa23.15■■□□□ 1.3
PRUNE1-208ENST00000462440 CFAP53Q96M91 514 aa23.14■■□□□ 1.29
PRUNE1-208ENST00000462440 USP21Q9UK80 565 aa23.14■■□□□ 1.29
PRUNE1-208ENST00000462440 EIF4A2Q14240 407 aaKnown RBP23.13■■□□□ 1.29
PRUNE1-208ENST00000462440 UNC5CLQ8IV45 518 aa23.13■■□□□ 1.29
PRUNE1-208ENST00000462440 WDR17Q8IZU2 1322 aa23.12■■□□□ 1.29
PRUNE1-208ENST00000462440 EVA1CP58658 441 aa23.12■■□□□ 1.29
PRUNE1-208ENST00000462440 CRB1P82279 1406 aa23.11■■□□□ 1.29
PRUNE1-208ENST00000462440 CSB-PGBD3P0DP91 1061 aa23.11■■□□□ 1.29
PRUNE1-208ENST00000462440 LARP1Q6PKG0 1096 aaKnown RBP23.1■■□□□ 1.29
PRUNE1-208ENST00000462440 ATRNO75882 1429 aa23.09■■□□□ 1.29
PRUNE1-208ENST00000462440 DIAPH1O60610 1272 aaKnown RBP23.09■■□□□ 1.29
PRUNE1-208ENST00000462440 IL13P35225 146 aa23.09■■□□□ 1.29
PRUNE1-208ENST00000462440 MIER1Q8N108 512 aa23.09■■□□□ 1.29
PRUNE1-208ENST00000462440 GLI3P10071 1580 aa23.09■■□□□ 1.29
PRUNE1-208ENST00000462440 CCDC184Q52MB2 194 aa23.08■■□□□ 1.29
PRUNE1-208ENST00000462440 TOM1L2Q6ZVM7 507 aa23.07■■□□□ 1.28
PRUNE1-208ENST00000462440 PARP4Q9UKK3 1724 aaKnown RBP23.07■■□□□ 1.28
PRUNE1-208ENST00000462440 VPS72Q15906 364 aa23.06■■□□□ 1.28
PRUNE1-208ENST00000462440 NLRP2Q9NX02 1062 aa23.06■■□□□ 1.28
PRUNE1-208ENST00000462440 NCAPD2Q15021 1401 aa23.06■■□□□ 1.28
PRUNE1-208ENST00000462440 NBPF6Q5VWK0 638 aa23.05■■□□□ 1.28
PRUNE1-208ENST00000462440 ZNF772Q68DY9 489 aaPredicted RBP23.05■■□□□ 1.28
PRUNE1-208ENST00000462440 NBPF4Q96M43 638 aa23.05■■□□□ 1.28
PRUNE1-208ENST00000462440 PHF23Q9BUL5 403 aaPredicted RBP23.05■■□□□ 1.28
PRUNE1-208ENST00000462440 SPATA31A5Q5VU36 1347 aa23.05■■□□□ 1.28
PRUNE1-208ENST00000462440 SPATA31A7Q8IWB4 1347 aa23.05■■□□□ 1.28
PRUNE1-208ENST00000462440 EYA1Q99502 592 aa23.04■■□□□ 1.28
PRUNE1-208ENST00000462440 MRS2Q9HD23 443 aa23.04■■□□□ 1.28
PRUNE1-208ENST00000462440 RGS17Q9UGC6 210 aaPredicted RBP23.04■■□□□ 1.28
PRUNE1-208ENST00000462440 TRPC5Q9UL62 973 aaPredicted RBP23.04■■□□□ 1.28
PRUNE1-208ENST00000462440 SPATA31A1Q5TZJ5 1347 aa23.04■■□□□ 1.28
PRUNE1-208ENST00000462440 IGSF1Q8N6C5 1336 aa23.04■■□□□ 1.28
PRUNE1-208ENST00000462440 CARD10Q9BWT7 1032 aa23.03■■□□□ 1.28
PRUNE1-208ENST00000462440 CCDC9Q9Y3X0 531 aaKnown RBP23.03■■□□□ 1.28
PRUNE1-208ENST00000462440 USHBP1Q8N6Y0 703 aa23.02■■□□□ 1.28
PRUNE1-208ENST00000462440 U2SURPO15042 1029 aaKnown RBP23.01■■□□□ 1.27
PRUNE1-208ENST00000462440 QTRT2Q9H974 415 aaKnown RBP23.01■■□□□ 1.27
PRUNE1-208ENST00000462440 USP35Q9P2H5 1018 aa23.01■■□□□ 1.27
PRUNE1-208ENST00000462440 NUDCQ9Y266 331 aa23.01■■□□□ 1.27
PRUNE1-208ENST00000462440 THSD7AQ9UPZ6 1657 aa23■■□□□ 1.27
PRUNE1-208ENST00000462440 CCER2I3L3R5 266 aa23■■□□□ 1.27
PRUNE1-208ENST00000462440 PKD1L3Q7Z443 1732 aa22.99■■□□□ 1.27
PRUNE1-208ENST00000462440 SHANK3Q9BYB0 1731 aa22.99■■□□□ 1.27
PRUNE1-208ENST00000462440 LRRC37A3O60309 1634 aa22.99■■□□□ 1.27
PRUNE1-208ENST00000462440 KDRP35968 1356 aa22.99■■□□□ 1.27
PRUNE1-208ENST00000462440 GJD4Q96KN9 370 aaPredicted RBP22.98■■□□□ 1.27
PRUNE1-208ENST00000462440 BRWD3Q6RI45 1802 aa22.98■■□□□ 1.27
PRUNE1-208ENST00000462440 MEGF6O75095 1541 aa22.98■■□□□ 1.27
PRUNE1-208ENST00000462440 U2AF1L5P0DN76 240 aaPredicted RBP22.97■■□□□ 1.27
PRUNE1-208ENST00000462440 U2AF1Q01081 240 aaKnown RBP eCLIP22.97■■□□□ 1.27
PRUNE1-208ENST00000462440 AEBP1Q8IUX7 1158 aa22.97■■□□□ 1.27
PRUNE1-208ENST00000462440 TCP11L2Q8N4U5 519 aa22.97■■□□□ 1.27
PRUNE1-208ENST00000462440 DISP2A7MBM2 1401 aa22.97■■□□□ 1.27
PRUNE1-208ENST00000462440 HMOX1P09601 288 aa22.96■■□□□ 1.27
PRUNE1-208ENST00000462440 SULT6B1Q6IMI4 303 aa22.96■■□□□ 1.27
PRUNE1-208ENST00000462440 THRAP3Q9Y2W1 955 aaKnown RBP22.96■■□□□ 1.27
PRUNE1-208ENST00000462440 WDR43Q15061 677 aaKnown RBP eCLIP22.95■■□□□ 1.26
PRUNE1-208ENST00000462440 POTEAQ6S8J7 498 aa22.95■■□□□ 1.26
PRUNE1-208ENST00000462440 VIRMAQ69YN4 1812 aaKnown RBP22.94■■□□□ 1.26
PRUNE1-208ENST00000462440 FAM98CQ17RN3 349 aaKnown RBP22.93■■□□□ 1.26
PRUNE1-208ENST00000462440 BARGINQ6ZT62 677 aa22.93■■□□□ 1.26
PRUNE1-208ENST00000462440 PNISRQ8TF01 805 aaKnown RBP22.93■■□□□ 1.26
PRUNE1-208ENST00000462440 DLG5Q8TDM6 1919 aa22.92■■□□□ 1.26
PRUNE1-208ENST00000462440 OVOS2A0A0G2JMS6 1433 aa22.92■■□□□ 1.26
PRUNE1-208ENST00000462440 IL2RBP14784 551 aa22.92■■□□□ 1.26
PRUNE1-208ENST00000462440 RBM6P78332 1123 aaKnown RBP22.92■■□□□ 1.26
PRUNE1-208ENST00000462440 RAPGEF4Q8WZA2 1011 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms