RNA–Protein interactions for RNA: ENST00000461768.5

SRRM1-204, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-204ENST00000461768 AXIN2Q9Y2T1 843 aa11.55□□□□□ -0.56
SRRM1-204ENST00000461768 MAP3K19Q56UN5 1328 aa11.55□□□□□ -0.56
SRRM1-204ENST00000461768 RGPD5Q99666 1765 aa11.54□□□□□ -0.56
SRRM1-204ENST00000461768 ZNF316A6NFI3 1004 aaPredicted RBP11.54□□□□□ -0.56
SRRM1-204ENST00000461768 RRS1Q15050 365 aaKnown RBP11.54□□□□□ -0.56
SRRM1-204ENST00000461768 VPS72Q15906 364 aa11.54□□□□□ -0.56
SRRM1-204ENST00000461768 PEAK1Q9H792 1746 aa11.54□□□□□ -0.56
SRRM1-204ENST00000461768 RTL1A6NKG5 1358 aa11.54□□□□□ -0.56
SRRM1-204ENST00000461768 BLMP54132 1417 aaPredicted RBP11.53□□□□□ -0.56
SRRM1-204ENST00000461768 CC2D1BQ5T0F9 858 aaKnown RBP11.53□□□□□ -0.56
SRRM1-204ENST00000461768 MORC1Q86VD1 984 aa11.53□□□□□ -0.56
SRRM1-204ENST00000461768 IP6K1Q92551 441 aa11.53□□□□□ -0.56
SRRM1-204ENST00000461768 GLI3P10071 1580 aa11.53□□□□□ -0.56
SRRM1-204ENST00000461768 KIF24Q5T7B8 1368 aa11.53□□□□□ -0.56
SRRM1-204ENST00000461768 MAP2P11137 1827 aaKnown RBP11.52□□□□□ -0.57
SRRM1-204ENST00000461768 RBM6P78332 1123 aaKnown RBP11.52□□□□□ -0.57
SRRM1-204ENST00000461768 DDX10Q13206 875 aaKnown RBP11.52□□□□□ -0.57
SRRM1-204ENST00000461768 GJD4Q96KN9 370 aaPredicted RBP11.52□□□□□ -0.57
SRRM1-204ENST00000461768 SMG6Q86US8 1419 aaKnown RBP11.52□□□□□ -0.57
SRRM1-204ENST00000461768 RXRBP28702 533 aa11.51□□□□□ -0.57
SRRM1-204ENST00000461768 HOXC9P31274 260 aa11.51□□□□□ -0.57
SRRM1-204ENST00000461768 TNNT2P45379 298 aaPredicted RBP11.51□□□□□ -0.57
SRRM1-204ENST00000461768 AMPHP49418 695 aa11.51□□□□□ -0.57
SRRM1-204ENST00000461768 EVA1CP58658 441 aa11.51□□□□□ -0.57
SRRM1-204ENST00000461768 LARP1Q6PKG0 1096 aaKnown RBP11.51□□□□□ -0.57
SRRM1-204ENST00000461768 STRN4Q9NRL3 753 aa11.51□□□□□ -0.57
SRRM1-204ENST00000461768 EMILIN1Q9Y6C2 1016 aa11.51□□□□□ -0.57
SRRM1-204ENST00000461768 SPATA31A5Q5VU36 1347 aa11.51□□□□□ -0.57
SRRM1-204ENST00000461768 SPATA31A7Q8IWB4 1347 aa11.51□□□□□ -0.57
SRRM1-204ENST00000461768 WDR17Q8IZU2 1322 aa11.51□□□□□ -0.57
SRRM1-204ENST00000461768 FLT4P35916 1363 aa11.51□□□□□ -0.57
SRRM1-204ENST00000461768 CDK12Q9NYV4 1490 aaPredicted RBP11.51□□□□□ -0.57
SRRM1-204ENST00000461768 POLKQ9UBT6 870 aa11.5□□□□□ -0.57
SRRM1-204ENST00000461768 CCDC9Q9Y3X0 531 aaKnown RBP11.5□□□□□ -0.57
SRRM1-204ENST00000461768 ERBB3P21860 1342 aa11.5□□□□□ -0.57
SRRM1-204ENST00000461768 SPATA31A1Q5TZJ5 1347 aa11.5□□□□□ -0.57
SRRM1-204ENST00000461768 CRB1P82279 1406 aa11.5□□□□□ -0.57
SRRM1-204ENST00000461768 FAM208AQ9UK61 1670 aaKnown RBP11.49□□□□□ -0.57
SRRM1-204ENST00000461768 ANKRD24Q8TF21 1146 aa11.49□□□□□ -0.57
SRRM1-204ENST00000461768 INSRP06213 1382 aa11.49□□□□□ -0.57
SRRM1-204ENST00000461768 CSB-PGBD3P0DP91 1061 aa11.48□□□□□ -0.57
SRRM1-204ENST00000461768 HSP90AB2PQ58FF8 381 aa11.48□□□□□ -0.57
SRRM1-204ENST00000461768 TOM1L2Q6ZVM7 507 aa11.48□□□□□ -0.57
SRRM1-204ENST00000461768 RGS12O14924 1447 aa11.48□□□□□ -0.57
SRRM1-204ENST00000461768 PPM1GO15355 546 aaPredicted RBP11.47□□□□□ -0.57
SRRM1-204ENST00000461768 ONECUT3O60422 494 aaPredicted RBP11.47□□□□□ -0.57
SRRM1-204ENST00000461768 CNGB1Q14028 1251 aaPredicted RBP11.47□□□□□ -0.57
SRRM1-204ENST00000461768 ILDR2Q71H61 639 aa11.47□□□□□ -0.57
SRRM1-204ENST00000461768 CARD10Q9BWT7 1032 aa11.47□□□□□ -0.57
SRRM1-204ENST00000461768 THSD7AQ9UPZ6 1657 aa11.46□□□□□ -0.57
SRRM1-204ENST00000461768 PARD3Q8TEW0 1356 aa11.46□□□□□ -0.57
SRRM1-204ENST00000461768 BARGINQ6ZT62 677 aa11.46□□□□□ -0.57
SRRM1-204ENST00000461768 TCP11L2Q8N4U5 519 aa11.46□□□□□ -0.57
SRRM1-204ENST00000461768 LTV1Q96GA3 475 aaPredicted RBP11.46□□□□□ -0.57
SRRM1-204ENST00000461768 USP35Q9P2H5 1018 aa11.46□□□□□ -0.57
SRRM1-204ENST00000461768 THRAP3Q9Y2W1 955 aaKnown RBP11.46□□□□□ -0.57
SRRM1-204ENST00000461768 WNK3Q9BYP7 1800 aa11.46□□□□□ -0.58
SRRM1-204ENST00000461768 FAM98CQ17RN3 349 aaKnown RBP11.45□□□□□ -0.58
SRRM1-204ENST00000461768 NLRP2Q9NX02 1062 aa11.45□□□□□ -0.58
SRRM1-204ENST00000461768 RGPD2P0DJD1 1756 aa11.45□□□□□ -0.58
SRRM1-204ENST00000461768 MTHFSP49914 203 aa11.44□□□□□ -0.58
SRRM1-204ENST00000461768 SEPT12Q8IYM1 358 aa11.44□□□□□ -0.58
SRRM1-204ENST00000461768 DISP2A7MBM2 1401 aa11.43□□□□□ -0.58
SRRM1-204ENST00000461768 PPP2R1AP30153 589 aa11.43□□□□□ -0.58
SRRM1-204ENST00000461768 EIF4A2Q14240 407 aaKnown RBP11.43□□□□□ -0.58
SRRM1-204ENST00000461768 NBPF6Q5VWK0 638 aa11.43□□□□□ -0.58
SRRM1-204ENST00000461768 NBPF4Q96M43 638 aa11.43□□□□□ -0.58
SRRM1-204ENST00000461768 BRWD3Q6RI45 1802 aa11.43□□□□□ -0.58
SRRM1-204ENST00000461768 PARP4Q9UKK3 1724 aaKnown RBP11.43□□□□□ -0.58
SRRM1-204ENST00000461768 RALBP1Q15311 655 aa11.42□□□□□ -0.58
SRRM1-204ENST00000461768 COL3A1P02461 1466 aaPredicted RBP11.42□□□□□ -0.58
SRRM1-204ENST00000461768 NCAPD2Q15021 1401 aa11.42□□□□□ -0.58
SRRM1-204ENST00000461768 LRRC37A3O60309 1634 aa11.42□□□□□ -0.58
SRRM1-204ENST00000461768 CDCA7Q9BWT1 371 aaPredicted RBP11.41□□□□□ -0.58
SRRM1-204ENST00000461768 RGPD1P0DJD0 1748 aa11.4□□□□□ -0.58
SRRM1-204ENST00000461768 A0A0G2JS52 829 aa11.4□□□□□ -0.58
SRRM1-204ENST00000461768 IL13P35225 146 aa11.4□□□□□ -0.58
SRRM1-204ENST00000461768 MYT1Q01538 1121 aa11.4□□□□□ -0.58
SRRM1-204ENST00000461768 EYA1Q99502 592 aa11.4□□□□□ -0.58
SRRM1-204ENST00000461768 IL2RBP14784 551 aa11.39□□□□□ -0.59
SRRM1-204ENST00000461768 USHBP1Q8N6Y0 703 aa11.39□□□□□ -0.59
SRRM1-204ENST00000461768 PRKRIP1Q9H875 184 aaPredicted RBP11.39□□□□□ -0.59
SRRM1-204ENST00000461768 MEGF6O75095 1541 aa11.39□□□□□ -0.59
SRRM1-204ENST00000461768 IGSF1Q8N6C5 1336 aa11.38□□□□□ -0.59
SRRM1-204ENST00000461768 DIAPH1O60610 1272 aaKnown RBP11.38□□□□□ -0.59
SRRM1-204ENST00000461768 KRT27Q7Z3Y8 459 aa11.38□□□□□ -0.59
SRRM1-204ENST00000461768 MYBBP1AQ9BQG0 1328 aaKnown RBP11.37□□□□□ -0.59
SRRM1-204ENST00000461768 OVOS2A0A0G2JMS6 1433 aa11.37□□□□□ -0.59
SRRM1-204ENST00000461768 TNS2Q63HR2 1409 aa11.37□□□□□ -0.59
SRRM1-204ENST00000461768 DDB1Q16531 1140 aa11.37□□□□□ -0.59
SRRM1-204ENST00000461768 CFAP53Q96M91 514 aa11.37□□□□□ -0.59
SRRM1-204ENST00000461768 SHANK3Q9BYB0 1731 aa11.36□□□□□ -0.59
SRRM1-204ENST00000461768 PDE3BQ13370 1112 aa11.36□□□□□ -0.59
SRRM1-204ENST00000461768 KDRP35968 1356 aa11.36□□□□□ -0.59
SRRM1-204ENST00000461768 EXOC5O00471 708 aa11.35□□□□□ -0.59
SRRM1-204ENST00000461768 RAPGEF4Q8WZA2 1011 aa11.35□□□□□ -0.59
SRRM1-204ENST00000461768 PLEKHG2Q9H7P9 1386 aa11.35□□□□□ -0.59
SRRM1-204ENST00000461768 PKD1L3Q7Z443 1732 aa11.35□□□□□ -0.59
SRRM1-204ENST00000461768 EP400Q96L91 3159 aa11.34□□□□□ -0.59
SRRM1-204ENST00000461768 TATP17735 454 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms