RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 QTRT2Q9H974 415 aaKnown RBP14.85□□□□□ -0.03
CCDC12-204ENST00000460035 ATRNO75882 1429 aa14.84□□□□□ -0.03
CCDC12-204ENST00000460035 RGPD2P0DJD1 1756 aa14.84□□□□□ -0.03
CCDC12-204ENST00000460035 DDX10Q13206 875 aaKnown RBP14.84□□□□□ -0.03
CCDC12-204ENST00000460035 UNC5CLQ8IV45 518 aa14.84□□□□□ -0.03
CCDC12-204ENST00000460035 ZNF316A6NFI3 1004 aaPredicted RBP14.83□□□□□ -0.04
CCDC12-204ENST00000460035 TNNT2P45379 298 aaPredicted RBP14.83□□□□□ -0.04
CCDC12-204ENST00000460035 CC2D1BQ5T0F9 858 aaKnown RBP14.83□□□□□ -0.04
CCDC12-204ENST00000460035 POTEAQ6S8J7 498 aa14.83□□□□□ -0.04
CCDC12-204ENST00000460035 STRN4Q9NRL3 753 aa14.83□□□□□ -0.04
CCDC12-204ENST00000460035 CCDC9Q9Y3X0 531 aaKnown RBP14.83□□□□□ -0.04
CCDC12-204ENST00000460035 COL5A2P05997 1499 aaPredicted RBP14.82□□□□□ -0.04
CCDC12-204ENST00000460035 GLI3P10071 1580 aa14.82□□□□□ -0.04
CCDC12-204ENST00000460035 MORC1Q86VD1 984 aa14.82□□□□□ -0.04
CCDC12-204ENST00000460035 TRPC5Q9UL62 973 aaPredicted RBP14.82□□□□□ -0.04
CCDC12-204ENST00000460035 RTL1A6NKG5 1358 aa14.82□□□□□ -0.04
CCDC12-204ENST00000460035 AMPHP49418 695 aa14.81□□□□□ -0.04
CCDC12-204ENST00000460035 RRS1Q15050 365 aaKnown RBP14.81□□□□□ -0.04
CCDC12-204ENST00000460035 KIF24Q5T7B8 1368 aa14.81□□□□□ -0.04
CCDC12-204ENST00000460035 BLMP54132 1417 aaPredicted RBP14.81□□□□□ -0.04
CCDC12-204ENST00000460035 BRWD3Q6RI45 1802 aa14.8□□□□□ -0.04
CCDC12-204ENST00000460035 AXIN2Q9Y2T1 843 aa14.8□□□□□ -0.04
CCDC12-204ENST00000460035 MAP3K19Q56UN5 1328 aa14.8□□□□□ -0.04
CCDC12-204ENST00000460035 PPM1GO15355 546 aaPredicted RBP14.79□□□□□ -0.04
CCDC12-204ENST00000460035 RXRBP28702 533 aa14.79□□□□□ -0.04
CCDC12-204ENST00000460035 VPS72Q15906 364 aa14.79□□□□□ -0.04
CCDC12-204ENST00000460035 SMG6Q86US8 1419 aaKnown RBP14.79□□□□□ -0.04
CCDC12-204ENST00000460035 CDK12Q9NYV4 1490 aaPredicted RBP14.79□□□□□ -0.04
CCDC12-204ENST00000460035 CSB-PGBD3P0DP91 1061 aa14.78□□□□□ -0.04
CCDC12-204ENST00000460035 IP6K1Q92551 441 aa14.78□□□□□ -0.04
CCDC12-204ENST00000460035 RBM6P78332 1123 aaKnown RBP14.77□□□□□ -0.05
CCDC12-204ENST00000460035 LTV1Q96GA3 475 aaPredicted RBP14.77□□□□□ -0.05
CCDC12-204ENST00000460035 GJD4Q96KN9 370 aaPredicted RBP14.77□□□□□ -0.05
CCDC12-204ENST00000460035 THSD7AQ9UPZ6 1657 aa14.77□□□□□ -0.05
CCDC12-204ENST00000460035 FLT4P35916 1363 aa14.76□□□□□ -0.05
CCDC12-204ENST00000460035 PARP4Q9UKK3 1724 aaKnown RBP14.76□□□□□ -0.05
CCDC12-204ENST00000460035 LARP1Q6PKG0 1096 aaKnown RBP14.76□□□□□ -0.05
CCDC12-204ENST00000460035 USP35Q9P2H5 1018 aa14.76□□□□□ -0.05
CCDC12-204ENST00000460035 CRB1P82279 1406 aa14.75□□□□□ -0.05
CCDC12-204ENST00000460035 SPATA31A5Q5VU36 1347 aa14.75□□□□□ -0.05
CCDC12-204ENST00000460035 SPATA31A7Q8IWB4 1347 aa14.75□□□□□ -0.05
CCDC12-204ENST00000460035 WDR17Q8IZU2 1322 aa14.75□□□□□ -0.05
CCDC12-204ENST00000460035 HOXC9P31274 260 aa14.75□□□□□ -0.05
CCDC12-204ENST00000460035 TOM1L2Q6ZVM7 507 aa14.75□□□□□ -0.05
CCDC12-204ENST00000460035 EMILIN1Q9Y6C2 1016 aa14.75□□□□□ -0.05
CCDC12-204ENST00000460035 INSRP06213 1382 aa14.74□□□□□ -0.05
CCDC12-204ENST00000460035 ERBB3P21860 1342 aa14.74□□□□□ -0.05
CCDC12-204ENST00000460035 ANKRD24Q8TF21 1146 aa14.74□□□□□ -0.05
CCDC12-204ENST00000460035 POLKQ9UBT6 870 aa14.74□□□□□ -0.05
CCDC12-204ENST00000460035 SPATA31A1Q5TZJ5 1347 aa14.73□□□□□ -0.05
CCDC12-204ENST00000460035 HSP90AB2PQ58FF8 381 aa14.73□□□□□ -0.05
CCDC12-204ENST00000460035 NLRP2Q9NX02 1062 aa14.73□□□□□ -0.05
CCDC12-204ENST00000460035 RGPD1P0DJD0 1748 aa14.72□□□□□ -0.05
CCDC12-204ENST00000460035 A0A0G2JS52 829 aa14.72□□□□□ -0.05
CCDC12-204ENST00000460035 MYT1Q01538 1121 aa14.72□□□□□ -0.05
CCDC12-204ENST00000460035 PARD3Q8TEW0 1356 aa14.72□□□□□ -0.05
CCDC12-204ENST00000460035 FAM98CQ17RN3 349 aaKnown RBP14.71□□□□□ -0.05
CCDC12-204ENST00000460035 ILDR2Q71H61 639 aa14.71□□□□□ -0.05
CCDC12-204ENST00000460035 RGS12O14924 1447 aa14.71□□□□□ -0.05
CCDC12-204ENST00000460035 LRRC37A3O60309 1634 aa14.7□□□□□ -0.06
CCDC12-204ENST00000460035 ONECUT3O60422 494 aaPredicted RBP14.7□□□□□ -0.06
CCDC12-204ENST00000460035 TCP11L2Q8N4U5 519 aa14.7□□□□□ -0.06
CCDC12-204ENST00000460035 CARD10Q9BWT7 1032 aa14.7□□□□□ -0.06
CCDC12-204ENST00000460035 THRAP3Q9Y2W1 955 aaKnown RBP14.7□□□□□ -0.06
CCDC12-204ENST00000460035 KAT6BQ8WYB5 2073 aa14.7□□□□□ -0.06
CCDC12-204ENST00000460035 MTHFSP49914 203 aa14.69□□□□□ -0.06
CCDC12-204ENST00000460035 BARGINQ6ZT62 677 aa14.69□□□□□ -0.06
CCDC12-204ENST00000460035 NCAPD2Q15021 1401 aa14.68□□□□□ -0.06
CCDC12-204ENST00000460035 SEPT12Q8IYM1 358 aa14.68□□□□□ -0.06
CCDC12-204ENST00000460035 SHANK3Q9BYB0 1731 aa14.68□□□□□ -0.06
CCDC12-204ENST00000460035 DISP2A7MBM2 1401 aa14.67□□□□□ -0.06
CCDC12-204ENST00000460035 COL3A1P02461 1466 aaPredicted RBP14.67□□□□□ -0.06
CCDC12-204ENST00000460035 PKD1L3Q7Z443 1732 aa14.66□□□□□ -0.06
CCDC12-204ENST00000460035 SBF2Q86WG5 1849 aa14.66□□□□□ -0.06
CCDC12-204ENST00000460035 PPP2R1AP30153 589 aa14.65□□□□□ -0.06
CCDC12-204ENST00000460035 RALBP1Q15311 655 aa14.65□□□□□ -0.06
CCDC12-204ENST00000460035 NBPF6Q5VWK0 638 aa14.65□□□□□ -0.06
CCDC12-204ENST00000460035 NBPF4Q96M43 638 aa14.65□□□□□ -0.06
CCDC12-204ENST00000460035 CDCA7Q9BWT1 371 aaPredicted RBP14.65□□□□□ -0.06
CCDC12-204ENST00000460035 VIRMAQ69YN4 1812 aaKnown RBP14.64□□□□□ -0.07
CCDC12-204ENST00000460035 EIF4A2Q14240 407 aaKnown RBP14.64□□□□□ -0.07
CCDC12-204ENST00000460035 USHBP1Q8N6Y0 703 aa14.64□□□□□ -0.07
CCDC12-204ENST00000460035 CFAP53Q96M91 514 aa14.63□□□□□ -0.07
CCDC12-204ENST00000460035 PDE3BQ13370 1112 aa14.62□□□□□ -0.07
CCDC12-204ENST00000460035 EYA1Q99502 592 aa14.62□□□□□ -0.07
CCDC12-204ENST00000460035 TNS2Q63HR2 1409 aa14.61□□□□□ -0.07
CCDC12-204ENST00000460035 EXOC5O00471 708 aa14.61□□□□□ -0.07
CCDC12-204ENST00000460035 DIAPH1O60610 1272 aaKnown RBP14.61□□□□□ -0.07
CCDC12-204ENST00000460035 IL2RBP14784 551 aa14.61□□□□□ -0.07
CCDC12-204ENST00000460035 KRT27Q7Z3Y8 459 aa14.61□□□□□ -0.07
CCDC12-204ENST00000460035 IGSF1Q8N6C5 1336 aa14.61□□□□□ -0.07
CCDC12-204ENST00000460035 MEGF6O75095 1541 aa14.61□□□□□ -0.07
CCDC12-204ENST00000460035 PLEKHG2Q9H7P9 1386 aa14.6□□□□□ -0.07
CCDC12-204ENST00000460035 IL13P35225 146 aa14.6□□□□□ -0.07
CCDC12-204ENST00000460035 DDB1Q16531 1140 aa14.6□□□□□ -0.07
CCDC12-204ENST00000460035 RAPGEF4Q8WZA2 1011 aa14.6□□□□□ -0.07
CCDC12-204ENST00000460035 PRKRIP1Q9H875 184 aaPredicted RBP14.6□□□□□ -0.07
CCDC12-204ENST00000460035 OVOS2A0A0G2JMS6 1433 aa14.59□□□□□ -0.07
CCDC12-204ENST00000460035 MYBBP1AQ9BQG0 1328 aaKnown RBP14.59□□□□□ -0.07
CCDC12-204ENST00000460035 KDRP35968 1356 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms