RNA–Protein interactions for RNA: ENST00000457888.2

UBDP1-202, Transcript of ubiquitin D pseudogene 1, humanhuman

BASIC

Gene UBDP1, Length 382 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBDP1-202ENST00000457888 ZC3H15Q8WU90 426 aaKnown RBP8.62□□□□□ -1.03
UBDP1-202ENST00000457888 ZNF385CQ66K41 422 aaPredicted RBP8.61□□□□□ -1.03
UBDP1-202ENST00000457888 CCDC155Q8N6L0 562 aa8.61□□□□□ -1.03
UBDP1-202ENST00000457888 LIMD1Q9UGP4 676 aa8.61□□□□□ -1.03
UBDP1-202ENST00000457888 QPCTQ16769 361 aa8.6□□□□□ -1.03
UBDP1-202ENST00000457888 SVOPQ8N4V2 548 aa8.6□□□□□ -1.03
UBDP1-202ENST00000457888 PGPEP1Q9NXJ5 209 aa8.6□□□□□ -1.03
UBDP1-202ENST00000457888 SPINT1O43278 529 aa8.59□□□□□ -1.03
UBDP1-202ENST00000457888 LILRB3O75022 631 aa8.59□□□□□ -1.03
UBDP1-202ENST00000457888 CBLBQ13191 982 aa8.59□□□□□ -1.03
UBDP1-202ENST00000457888 TUSC1Q2TAM9 212 aa8.59□□□□□ -1.03
UBDP1-202ENST00000457888 RNFT1Q5M7Z0 435 aa8.59□□□□□ -1.03
UBDP1-202ENST00000457888 PPP1R26Q5T8A7 1209 aaPredicted RBP8.59□□□□□ -1.03
UBDP1-202ENST00000457888 Q6ZVU0 165 aa8.59□□□□□ -1.03
UBDP1-202ENST00000457888 HELBQ8NG08 1087 aaPredicted RBP8.59□□□□□ -1.03
UBDP1-202ENST00000457888 CARD14Q9BXL6 1004 aa8.59□□□□□ -1.03
UBDP1-202ENST00000457888 TRIM66O15016 1216 aa8.58□□□□□ -1.04
UBDP1-202ENST00000457888 ERFEQ4G0M1 354 aa8.58□□□□□ -1.04
UBDP1-202ENST00000457888 GPKOWQ92917 476 aaPredicted RBP eCLIP8.58□□□□□ -1.04
UBDP1-202ENST00000457888 SLC35F4A4IF30 521 aa8.57□□□□□ -1.04
UBDP1-202ENST00000457888 MYSM1Q5VVJ2 828 aa8.57□□□□□ -1.04
UBDP1-202ENST00000457888 WHAMMQ8TF30 809 aa8.57□□□□□ -1.04
UBDP1-202ENST00000457888 SLURP2P0DP57 97 aa8.56□□□□□ -1.04
UBDP1-202ENST00000457888 VWA5B2Q8N398 1253 aa8.56□□□□□ -1.04
UBDP1-202ENST00000457888 ARHGEF15O94989 841 aa8.55□□□□□ -1.04
UBDP1-202ENST00000457888 ITGA6P23229 1130 aa8.55□□□□□ -1.04
UBDP1-202ENST00000457888 IRS1P35568 1242 aa8.55□□□□□ -1.04
UBDP1-202ENST00000457888 DNMT3AQ9Y6K1 912 aaPredicted RBP8.55□□□□□ -1.04
UBDP1-202ENST00000457888 CDC14CA4D256 554 aa8.54□□□□□ -1.04
UBDP1-202ENST00000457888 RTL5Q5HYW3 569 aaPredicted RBP8.54□□□□□ -1.04
UBDP1-202ENST00000457888 GPAT2Q6NUI2 795 aa8.54□□□□□ -1.04
UBDP1-202ENST00000457888 SV2AQ7L0J3 742 aa8.54□□□□□ -1.04
UBDP1-202ENST00000457888 AK7Q96M32 723 aa8.54□□□□□ -1.04
UBDP1-202ENST00000457888 IGHA1P01876 353 aa8.53□□□□□ -1.04
UBDP1-202ENST00000457888 CTSOP43234 321 aaPredicted RBP8.53□□□□□ -1.04
UBDP1-202ENST00000457888 MARSP56192 900 aaKnown RBP8.53□□□□□ -1.04
UBDP1-202ENST00000457888 KCTD15Q96SI1 283 aaPredicted RBP8.53□□□□□ -1.04
UBDP1-202ENST00000457888 CDV3Q9UKY7 258 aaKnown RBP8.53□□□□□ -1.04
UBDP1-202ENST00000457888 DHX9Q08211 1270 aaKnown RBP8.52□□□□□ -1.05
UBDP1-202ENST00000457888 KANK3Q6NY19 840 aa8.52□□□□□ -1.05
UBDP1-202ENST00000457888 SLC10A4Q96EP9 437 aa8.52□□□□□ -1.05
UBDP1-202ENST00000457888 AGBL1Q96MI9 1066 aa8.52□□□□□ -1.05
UBDP1-202ENST00000457888 ARHGAP9Q9BRR9 750 aa8.52□□□□□ -1.05
UBDP1-202ENST00000457888 RELBQ01201 579 aa8.51□□□□□ -1.05
UBDP1-202ENST00000457888 PDXDC2PQ6P474 469 aa8.51□□□□□ -1.05
UBDP1-202ENST00000457888 INSM2Q96T92 566 aaPredicted RBP8.51□□□□□ -1.05
UBDP1-202ENST00000457888 SCARF2Q96GP6 870 aaPredicted RBP8.5□□□□□ -1.05
UBDP1-202ENST00000457888 POLMQ9NP87 494 aaPredicted RBP8.5□□□□□ -1.05
UBDP1-202ENST00000457888 CLK2P49760 499 aaKnown RBP8.49□□□□□ -1.05
UBDP1-202ENST00000457888 FOXK2Q01167 660 aa8.49□□□□□ -1.05
UBDP1-202ENST00000457888 INTS6LQ5JSJ4 861 aaKnown RBP8.49□□□□□ -1.05
UBDP1-202ENST00000457888 ADAMTS2O95450 1211 aa8.48□□□□□ -1.05
UBDP1-202ENST00000457888 CTDSPL2Q05D32 466 aa8.48□□□□□ -1.05
UBDP1-202ENST00000457888 ZBTB33Q86T24 672 aa8.48□□□□□ -1.05
UBDP1-202ENST00000457888 RNF217Q8TC41 542 aa8.48□□□□□ -1.05
UBDP1-202ENST00000457888 FKBPLQ9UIM3 349 aa8.48□□□□□ -1.05
UBDP1-202ENST00000457888 SENP3-EIF4A1A0A087X0R7 540 aa8.47□□□□□ -1.05
UBDP1-202ENST00000457888 PDE4DQ08499 809 aa8.47□□□□□ -1.05
UBDP1-202ENST00000457888 MAP3K10Q02779 954 aa8.46□□□□□ -1.06
UBDP1-202ENST00000457888 LYPD4Q6UWN0 246 aa8.46□□□□□ -1.06
UBDP1-202ENST00000457888 ZNF395Q9H8N7 513 aaPredicted RBP8.46□□□□□ -1.06
UBDP1-202ENST00000457888 SRSF11Q05519 484 aaKnown RBP8.45□□□□□ -1.06
UBDP1-202ENST00000457888 RSPH6AQ9H0K4 717 aa8.45□□□□□ -1.06
UBDP1-202ENST00000457888 ZC3H4Q9UPT8 1303 aaKnown RBP8.45□□□□□ -1.06
UBDP1-202ENST00000457888 LRRN4Q8WUT4 740 aa8.44□□□□□ -1.06
UBDP1-202ENST00000457888 POLR3EQ9NVU0 708 aa8.44□□□□□ -1.06
UBDP1-202ENST00000457888 CELA2BP08218 269 aaPredicted RBP8.43□□□□□ -1.06
UBDP1-202ENST00000457888 PTK2Q05397 1052 aa8.43□□□□□ -1.06
UBDP1-202ENST00000457888 TMPRSS4Q9NRS4 437 aa8.43□□□□□ -1.06
UBDP1-202ENST00000457888 ADH1AP07327 375 aa8.42□□□□□ -1.06
UBDP1-202ENST00000457888 GAS6Q14393 721 aa8.42□□□□□ -1.06
UBDP1-202ENST00000457888 FOXD4L5Q5VV16 416 aaPredicted RBP8.42□□□□□ -1.06
UBDP1-202ENST00000457888 OCSTAMPQ9BR26 566 aa8.42□□□□□ -1.06
UBDP1-202ENST00000457888 NR6A1Q15406 480 aa8.41□□□□□ -1.06
UBDP1-202ENST00000457888 NBPF20Q3BBV1 942 aa8.41□□□□□ -1.06
UBDP1-202ENST00000457888 ZNF784Q8NCA9 323 aaPredicted RBP8.41□□□□□ -1.06
UBDP1-202ENST00000457888 ADAM32Q8TC27 787 aa8.41□□□□□ -1.06
UBDP1-202ENST00000457888 ENAMQ9NRM1 1142 aa8.41□□□□□ -1.06
UBDP1-202ENST00000457888 CUEDC1Q9NWM3 386 aaPredicted RBP8.41□□□□□ -1.06
UBDP1-202ENST00000457888 GPSM3Q9Y4H4 160 aa8.41□□□□□ -1.06
UBDP1-202ENST00000457888 PTGIRP43119 386 aa8.4□□□□□ -1.06
UBDP1-202ENST00000457888 LYSMD3Q7Z3D4 306 aa8.4□□□□□ -1.06
UBDP1-202ENST00000457888 LILRA1O75019 489 aa8.39□□□□□ -1.07
UBDP1-202ENST00000457888 RAB15P59190 212 aa8.39□□□□□ -1.07
UBDP1-202ENST00000457888 PHF20L1A8MW92 1017 aa8.38□□□□□ -1.07
UBDP1-202ENST00000457888 ADD1P35611 737 aaKnown RBP8.38□□□□□ -1.07
UBDP1-202ENST00000457888 KDF1Q8NAX2 398 aaPredicted RBP8.38□□□□□ -1.07
UBDP1-202ENST00000457888 ERVH48-1M5A8F1 160 aa8.37□□□□□ -1.07
UBDP1-202ENST00000457888 PLA2G4EQ3MJ16 856 aa8.37□□□□□ -1.07
UBDP1-202ENST00000457888 MBIPQ9NS73 344 aa8.37□□□□□ -1.07
UBDP1-202ENST00000457888 MSTNO14793 375 aa8.36□□□□□ -1.07
UBDP1-202ENST00000457888 ZNF837Q96EG3 531 aaPredicted RBP8.36□□□□□ -1.07
UBDP1-202ENST00000457888 GMCL1Q96IK5 515 aa8.36□□□□□ -1.07
UBDP1-202ENST00000457888 CNTNAP5Q8WYK1 1306 aa8.35□□□□□ -1.07
UBDP1-202ENST00000457888 RNF144AP50876 292 aaPredicted RBP8.35□□□□□ -1.07
UBDP1-202ENST00000457888 PRICKLE2Q7Z3G6 844 aa8.35□□□□□ -1.07
UBDP1-202ENST00000457888 DZIP3Q86Y13 1208 aaKnown RBP8.35□□□□□ -1.07
UBDP1-202ENST00000457888 TRIM22Q8IYM9 498 aa8.35□□□□□ -1.07
UBDP1-202ENST00000457888 DCAF5Q96JK2 942 aa8.35□□□□□ -1.07
UBDP1-202ENST00000457888 ESPNB1AK53 854 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms