RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 USP21Q9UK80 565 aa19.21■□□□□ 0.67
TIMP1-205ENST00000456754 AATKQ6ZMQ8 1374 aa19.2■□□□□ 0.66
TIMP1-205ENST00000456754 POTEAQ6S8J7 498 aa19.2■□□□□ 0.66
TIMP1-205ENST00000456754 NPC1L1Q9UHC9 1359 aa19.19■□□□□ 0.66
TIMP1-205ENST00000456754 STRN4Q9NRL3 753 aa19.19■□□□□ 0.66
TIMP1-205ENST00000456754 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.19■□□□□ 0.66
TIMP1-205ENST00000456754 POLKQ9UBT6 870 aa19.18■□□□□ 0.66
TIMP1-205ENST00000456754 COL5A2P05997 1499 aaPredicted RBP19.17■□□□□ 0.66
TIMP1-205ENST00000456754 PPM1GO15355 546 aaPredicted RBP19.17■□□□□ 0.66
TIMP1-205ENST00000456754 UNC5CLQ8IV45 518 aa19.17■□□□□ 0.66
TIMP1-205ENST00000456754 RGPD2P0DJD1 1756 aa19.16■□□□□ 0.66
TIMP1-205ENST00000456754 HOXC9P31274 260 aa19.16■□□□□ 0.66
TIMP1-205ENST00000456754 AMPHP49418 695 aa19.16■□□□□ 0.66
TIMP1-205ENST00000456754 HSP90AB2PQ58FF8 381 aa19.16■□□□□ 0.66
TIMP1-205ENST00000456754 LARP1Q6PKG0 1096 aaKnown RBP19.16■□□□□ 0.66
TIMP1-205ENST00000456754 LTV1Q96GA3 475 aaPredicted RBP19.16■□□□□ 0.66
TIMP1-205ENST00000456754 ATRNO75882 1429 aa19.16■□□□□ 0.66
TIMP1-205ENST00000456754 IP6K1Q92551 441 aa19.15■□□□□ 0.66
TIMP1-205ENST00000456754 QTRT2Q9H974 415 aaKnown RBP19.14■□□□□ 0.65
TIMP1-205ENST00000456754 GLI3P10071 1580 aa19.14■□□□□ 0.65
TIMP1-205ENST00000456754 ZNF772Q68DY9 489 aaPredicted RBP19.13■□□□□ 0.65
TIMP1-205ENST00000456754 ABCC6O95255 1503 aa19.13■□□□□ 0.65
TIMP1-205ENST00000456754 SMG6Q86US8 1419 aaKnown RBP19.12■□□□□ 0.65
TIMP1-205ENST00000456754 PARD3Q8TEW0 1356 aa19.12■□□□□ 0.65
TIMP1-205ENST00000456754 EVA1CP58658 441 aa19.12■□□□□ 0.65
TIMP1-205ENST00000456754 ANKRD24Q8TF21 1146 aa19.12■□□□□ 0.65
TIMP1-205ENST00000456754 RTL1A6NKG5 1358 aa19.11■□□□□ 0.65
TIMP1-205ENST00000456754 USP35Q9P2H5 1018 aa19.11■□□□□ 0.65
TIMP1-205ENST00000456754 CCDC9Q9Y3X0 531 aaKnown RBP19.11■□□□□ 0.65
TIMP1-205ENST00000456754 FLT4P35916 1363 aa19.1■□□□□ 0.65
TIMP1-205ENST00000456754 ERBB3P21860 1342 aa19.1■□□□□ 0.65
TIMP1-205ENST00000456754 PPP2R1AP30153 589 aa19.1■□□□□ 0.65
TIMP1-205ENST00000456754 MTHFSP49914 203 aa19.1■□□□□ 0.65
TIMP1-205ENST00000456754 VPS72Q15906 364 aa19.1■□□□□ 0.65
TIMP1-205ENST00000456754 TRPC5Q9UL62 973 aaPredicted RBP19.1■□□□□ 0.65
TIMP1-205ENST00000456754 BLMP54132 1417 aaPredicted RBP19.09■□□□□ 0.65
TIMP1-205ENST00000456754 CSB-PGBD3P0DP91 1061 aa19.09■□□□□ 0.65
TIMP1-205ENST00000456754 INSRP06213 1382 aa19.08■□□□□ 0.65
TIMP1-205ENST00000456754 SPATA31A5Q5VU36 1347 aa19.08■□□□□ 0.65
TIMP1-205ENST00000456754 SPATA31A7Q8IWB4 1347 aa19.08■□□□□ 0.65
TIMP1-205ENST00000456754 WDR17Q8IZU2 1322 aa19.08■□□□□ 0.65
TIMP1-205ENST00000456754 GJD4Q96KN9 370 aaPredicted RBP19.08■□□□□ 0.64
TIMP1-205ENST00000456754 CDK12Q9NYV4 1490 aaPredicted RBP19.08■□□□□ 0.64
TIMP1-205ENST00000456754 SPATA31A1Q5TZJ5 1347 aa19.07■□□□□ 0.64
TIMP1-205ENST00000456754 TOM1L2Q6ZVM7 507 aa19.07■□□□□ 0.64
TIMP1-205ENST00000456754 USHBP1Q8N6Y0 703 aa19.07■□□□□ 0.64
TIMP1-205ENST00000456754 CRB1P82279 1406 aa19.07■□□□□ 0.64
TIMP1-205ENST00000456754 KIF24Q5T7B8 1368 aa19.06■□□□□ 0.64
TIMP1-205ENST00000456754 FAM208AQ9UK61 1670 aaKnown RBP19.05■□□□□ 0.64
TIMP1-205ENST00000456754 COL3A1P02461 1466 aaPredicted RBP19.05■□□□□ 0.64
TIMP1-205ENST00000456754 EIF4A2Q14240 407 aaKnown RBP19.05■□□□□ 0.64
TIMP1-205ENST00000456754 NLRP2Q9NX02 1062 aa19.05■□□□□ 0.64
TIMP1-205ENST00000456754 WNK3Q9BYP7 1800 aa19.04■□□□□ 0.64
TIMP1-205ENST00000456754 RXRBP28702 533 aa19.04■□□□□ 0.64
TIMP1-205ENST00000456754 FAM98CQ17RN3 349 aaKnown RBP19.04■□□□□ 0.64
TIMP1-205ENST00000456754 NBPF6Q5VWK0 638 aa19.04■□□□□ 0.64
TIMP1-205ENST00000456754 NBPF4Q96M43 638 aa19.04■□□□□ 0.64
TIMP1-205ENST00000456754 PRKRIP1Q9H875 184 aaPredicted RBP19.04■□□□□ 0.64
TIMP1-205ENST00000456754 RGS12O14924 1447 aa19.03■□□□□ 0.64
TIMP1-205ENST00000456754 RBM6P78332 1123 aaKnown RBP19.03■□□□□ 0.64
TIMP1-205ENST00000456754 ILDR2Q71H61 639 aa19.03■□□□□ 0.64
TIMP1-205ENST00000456754 BRWD3Q6RI45 1802 aa19.02■□□□□ 0.63
TIMP1-205ENST00000456754 RALBP1Q15311 655 aa19.01■□□□□ 0.63
TIMP1-205ENST00000456754 EYA1Q99502 592 aa19.01■□□□□ 0.63
TIMP1-205ENST00000456754 CARD10Q9BWT7 1032 aa19.01■□□□□ 0.63
TIMP1-205ENST00000456754 THSD7AQ9UPZ6 1657 aa19.01■□□□□ 0.63
TIMP1-205ENST00000456754 RGPD1P0DJD0 1748 aa19■□□□□ 0.63
TIMP1-205ENST00000456754 IL13P35225 146 aa19■□□□□ 0.63
TIMP1-205ENST00000456754 TCP11L2Q8N4U5 519 aa19■□□□□ 0.63
TIMP1-205ENST00000456754 CCDC184Q52MB2 194 aa18.98■□□□□ 0.63
TIMP1-205ENST00000456754 DISP2A7MBM2 1401 aa18.98■□□□□ 0.63
TIMP1-205ENST00000456754 MYBBP1AQ9BQG0 1328 aaKnown RBP18.98■□□□□ 0.63
TIMP1-205ENST00000456754 MEGF6O75095 1541 aa18.97■□□□□ 0.63
TIMP1-205ENST00000456754 AEBP1Q8IUX7 1158 aa18.97■□□□□ 0.63
TIMP1-205ENST00000456754 SEPT12Q8IYM1 358 aa18.97■□□□□ 0.63
TIMP1-205ENST00000456754 LRRC37A3O60309 1634 aa18.96■□□□□ 0.63
TIMP1-205ENST00000456754 A0A0G2JS52 829 aa18.96■□□□□ 0.63
TIMP1-205ENST00000456754 MYT1Q01538 1121 aa18.96■□□□□ 0.63
TIMP1-205ENST00000456754 NCAPD2Q15021 1401 aa18.95■□□□□ 0.62
TIMP1-205ENST00000456754 ONECUT3O60422 494 aaPredicted RBP18.95■□□□□ 0.62
TIMP1-205ENST00000456754 DIAPH1O60610 1272 aaKnown RBP18.95■□□□□ 0.62
TIMP1-205ENST00000456754 BARGINQ6ZT62 677 aa18.95■□□□□ 0.62
TIMP1-205ENST00000456754 PARP4Q9UKK3 1724 aaKnown RBP18.94■□□□□ 0.62
TIMP1-205ENST00000456754 IGSF1Q8N6C5 1336 aa18.94■□□□□ 0.62
TIMP1-205ENST00000456754 ANP32CO43423 234 aa18.93■□□□□ 0.62
TIMP1-205ENST00000456754 HMOX1P09601 288 aa18.93■□□□□ 0.62
TIMP1-205ENST00000456754 FAM182BQ5T319 152 aa18.93■□□□□ 0.62
TIMP1-205ENST00000456754 THRAP3Q9Y2W1 955 aaKnown RBP18.93■□□□□ 0.62
TIMP1-205ENST00000456754 SHANK3Q9BYB0 1731 aa18.92■□□□□ 0.62
TIMP1-205ENST00000456754 U2SURPO15042 1029 aaKnown RBP18.92■□□□□ 0.62
TIMP1-205ENST00000456754 IL2RBP14784 551 aa18.91■□□□□ 0.62
TIMP1-205ENST00000456754 DIEXFQ68CQ4 756 aaKnown RBP18.91■□□□□ 0.62
TIMP1-205ENST00000456754 SULT6B1Q6IMI4 303 aa18.91■□□□□ 0.62
TIMP1-205ENST00000456754 CFAP53Q96M91 514 aa18.91■□□□□ 0.62
TIMP1-205ENST00000456754 OVOS2A0A0G2JMS6 1433 aa18.88■□□□□ 0.61
TIMP1-205ENST00000456754 PKD1L3Q7Z443 1732 aa18.86■□□□□ 0.61
TIMP1-205ENST00000456754 TNS2Q63HR2 1409 aa18.86■□□□□ 0.61
TIMP1-205ENST00000456754 KDRP35968 1356 aa18.86■□□□□ 0.61
TIMP1-205ENST00000456754 DDB1Q16531 1140 aa18.86■□□□□ 0.61
TIMP1-205ENST00000456754 MARCH10Q8NA82 808 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms